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GWE2_RBX1_39_32_gwe2_scaffold_2700

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWE2_RBX1_39_32_gwe2_scaffold_2700_trna_2
unknown

Not on your lists

comp(196..266)
DNA (71bp)
transferRNA
GWE2_RBX1_39_32_gwe2_scaffold_2700_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(308..1141)
DNA (834bp) protein (278aa)
hypothetical protein; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] id=24610945 bin=RAAC11 species=Persephonella marina genus=Persephonella taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=RAAC11 organism_group=Unknown_CP
hypothetical protein; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWE2_RBX1_39_32_gwe2_scaffold_2700_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(1146..1586)
DNA (441bp) protein (147aa)
Putative uncharacterized protein id=1929654 bin=GWE2_RBX1_39_32 species=Caldanaerobacter subterraneus genus=Caldanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWE2_RBX1_39_32_gwe2_scaffold_2700_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(1602..2510)
DNA (909bp) protein (303aa)
peptidase M23 id=24610947 bin=RAAC11 species=Pelosinus fermentans genus=Pelosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
peptidase M23 Tax=GWF2_RBX1_38_17_curated
Peptidase M23
GWE2_RBX1_39_32_gwe2_scaffold_2700_trna_1
unknown

Not on your lists

comp(2575..2648)
DNA (74bp)
transferRNA
GWE2_RBX1_39_32_gwe2_scaffold_2700_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(2720..3301)
DNA (582bp) protein (194aa)
id=1929662 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1929662 Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_2700_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(3310..4530)
DNA (1221bp) protein (407aa)
aspartate kinase (EC:2.7.2.4); K00928 aspartate kinase [EC:2.7.2.4] Tax=GWF2_RBX1_38_17_curated
aspartate kinase (EC:2.7.2.4)
Aspartokinase id=1929663 bin=GWE2_RBX1_39_32 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWE2_RBX1_39_32_gwe2_scaffold_2700_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(4622..5749)
DNA (1128bp) protein (376aa)
Glycosyltransferase id=1987322 bin=GWD2_RBX1-related_39_127 species=unknown genus=unknown taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
RfaG5; glycosyltransferase Tax=GWF2_RBX1_38_17_curated
RfaG5; glycosyltransferase
GWE2_RBX1_39_32_gwe2_scaffold_2700_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(5718..7049)
DNA (1332bp) protein (444aa)
Uncharacterized protein id=4615966 bin=GWF2_OP9-related_38_17 species=Idiomarina xiamenensis genus=Idiomarina taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
putative glycosyltransferase Tax=GWF2_RBX1_38_17_curated
putative glycosyltransferase
GWE2_RBX1_39_32_gwe2_scaffold_2700_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(7173..8525)
DNA (1353bp) protein (451aa)
O-antigen flippase Wzx id=1929675 bin=GWE2_RBX1_39_32 species=Flavobacterium frigoris genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
O-antigen membrane protein Tax=GWF2_RBX1_38_17_curated
O-antigen membrane protein
GWE2_RBX1_39_32_gwe2_scaffold_2700_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(8665..9012)
DNA (348bp) protein (116aa)
Single-stranded DNA-binding protein id=1929679 bin=GWE2_RBX1_39_32 species=Clostridium botulinum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
ssb2; single-strand binding protein Ssb2; K03111 single-strand DNA-binding protein Tax=GWF2_RBX1_38_17_curated
ssb2; single-strand binding protein Ssb2
Displaying 11 items

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