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GWE2_RBX1_39_32_gwe2_scaffold_764

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWE2_RBX1_39_32_gwe2_scaffold_764_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(1..750)
DNA (750bp) protein (250aa)
id=2160292 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1912862 Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_764_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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1420..2439
DNA (1020bp) protein (340aa)
Glycosyl transferase family 2 id=2160293 bin=GWE2_RBX1_39_32 species=Methanobacterium sp. genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
family 2 glycosyl transferase Tax=GWF2_RBX1_38_17_curated
family 2 glycosyl transferase
GWE2_RBX1_39_32_gwe2_scaffold_764_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

2604..3920
DNA (1317bp) protein (439aa)
RnfABCDGE type electron transport complex subunit C; K03615 electron transport complex protein RnfC Tax=GWF2_RBX1_38_17_curated
RnfABCDGE type electron transport complex subunit C; K03615 electron transport complex protein RnfC id=24610052 bin=RAAC11 species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
RnfABCDGE type electron transport complex subunit C
GWE2_RBX1_39_32_gwe2_scaffold_764_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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3933..4931
DNA (999bp) protein (333aa)
Electron transport complex, RnfABCDGE type, D subunit id=2143397 bin=GWD2_RBX1-related_39_127 species=Clostridium clariflavum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
RnfABCDGE type electron transport complex subunit D; K03614 electron transport complex protein RnfD Tax=GWF2_RBX1_38_17_curated
RnfABCDGE type electron transport complex subunit D
GWE2_RBX1_39_32_gwe2_scaffold_764_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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4924..5496
DNA (573bp) protein (191aa)
Electron transport complex protein id=2160296 bin=GWE2_RBX1_39_32 species=[Clostridium] stercorarium genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
rnfG; electron transport complex protein RnfG Tax=GWF2_RBX1_38_17_curated
nfoG; NfoG
GWE2_RBX1_39_32_gwe2_scaffold_764_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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5493..6200
DNA (708bp) protein (236aa)
Electron transport complex, RnfABCDGE type, E subunit id=2160297 bin=GWE2_RBX1_39_32 species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
RnfABCDGE type electron transport complex subunit E; K03613 electron transport complex protein RnfE Tax=GWF2_RBX1_38_17_curated
RnfABCDGE type electron transport complex subunit E
GWE2_RBX1_39_32_gwe2_scaffold_764_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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6225..6806
DNA (582bp) protein (194aa)
Putative inner membrane subunit of an electron transport system id=2160298 bin=GWE2_RBX1_39_32 species=[Clostridium] sticklandii genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
rnfA; inner membrane subunit of an electron transport system; K03617 electron transport complex protein RnfA Tax=GWF2_RBX1_38_17_curated
rnfA; putative inner membrane subunit of an electron transport system
GWE2_RBX1_39_32_gwe2_scaffold_764_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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6837..7631
DNA (795bp) protein (265aa)
Electron transport complex, RnfABCDGE type, B subunit id=2160299 bin=GWE2_RBX1_39_32 species=Clostridium clariflavum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
RnfABCDGE type electron transport complex subunit B Tax=GWF2_RBX1_38_17_curated
RnfABCDGE type electron transport complex subunit B
GWE2_RBX1_39_32_gwe2_scaffold_764_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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7662..8273
DNA (612bp) protein (204aa)
V-type ATP synthase subunit E; K02121 V-type H+-transporting ATPase subunit E [EC:3.6.3.14] Tax=GWF2_RBX1_38_17_curated
V-type ATP synthase subunit E id=2160300 bin=GWE2_RBX1_39_32 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
V-type ATP synthase subunit E
GWE2_RBX1_39_32_gwe2_scaffold_764_10
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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8266..8772
DNA (507bp) protein (169aa)
Uncharacterized protein BB_0095 id=2160301 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWE2_RBX1_39_32_gwe2_scaffold_764_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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8753..10477
DNA (1725bp) protein (575aa)
V-type ATP synthase subunit alpha (EC:3.6.3.14); K02117 V-type H+-transporting ATPase subunit A [EC:3.6.3.14] Tax=GWF2_RBX1_38_17_curated
V-type ATP synthase subunit alpha (EC:3.6.3.14)
V-type ATP synthase alpha chain id=2143383 bin=GWD2_RBX1-related_39_127 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWE2_RBX1_39_32_gwe2_scaffold_764_12
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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10477..11781
DNA (1305bp) protein (435aa)
V-type ATP synthase subunit B; K02118 V-type H+-transporting ATPase subunit B [EC:3.6.3.14] Tax=GWF2_RBX1_38_17_curated
V-type ATP synthase beta chain id=2160303 bin=GWE2_RBX1_39_32 species=Spirochaeta thermophila genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
V-type ATP synthase subunit B
GWE2_RBX1_39_32_gwe2_scaffold_764_13
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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11791..12399
DNA (609bp) protein (203aa)
V-type ATPase subunit D; K02120 V-type H+-transporting ATPase subunit D [EC:3.6.3.14] Tax=GWF2_RBX1_38_17_curated
V-type ATPase, D subunit id=2160304 bin=GWE2_RBX1_39_32 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
V-type ATPase subunit D
GWE2_RBX1_39_32_gwe2_scaffold_764_14
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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12402..14222
DNA (1821bp) protein (607aa)
V-type ATPase 116 kDa subunit; K02123 V-type H+-transporting ATPase subunit I [EC:3.6.3.14] Tax=GWF2_RBX1_38_17_curated
Putative uncharacterized protein id=2160305 bin=GWE2_RBX1_39_32 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
ATPase V
GWE2_RBX1_39_32_gwe2_scaffold_764_15
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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14250..14690
DNA (441bp) protein (147aa)
V-type ATP synthase subunit K; K02124 V-type H+-transporting ATPase subunit K [EC:3.6.3.14] Tax=GWF2_RBX1_38_17_curated
Putative uncharacterized protein id=2143378 bin=GWD2_RBX1-related_39_127 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
V-type ATP synthase subunit K
GWE2_RBX1_39_32_gwe2_scaffold_764_16
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

14768..15472
DNA (705bp) protein (235aa)
glutamine amidotransferase id=24610039 bin=RAAC11 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
glutamine amidotransferase Tax=GWF2_RBX1_38_17_curated
glutamine amidotransferase
GWE2_RBX1_39_32_gwe2_scaffold_764_17
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

15593..17476
DNA (1884bp) protein (628aa)
NADH dehydrogenase (quinone) id=2160310 bin=GWE2_RBX1_39_32 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
NADH:ubiquinone oxidoreductase subunit 5 (chain L)/multisubunit Na+/H+ antiporter, MnhA subunit Tax=GWF2_RBX1_38_17_curated
NADH:ubiquinone oxidoreductase subunit 5 (chain L)/multisubunit Na+/H+ antiporter, MnhA subunit
GWE2_RBX1_39_32_gwe2_scaffold_764_18
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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17473..18324
DNA (852bp) protein (284aa)
ech hydrogenase subunit B id=3954475 bin=GWF2_OP9-related_38_17 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
formate hydrogenlyase subunit 4 Tax=GWF2_RBX1_38_17_curated
formate hydrogenlyase subunit 4
GWE2_RBX1_39_32_gwe2_scaffold_764_19
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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18342..18773
DNA (432bp) protein (144aa)
NADH ubiquinone oxidoreductase 20 kDa subunit id=2160314 bin=GWE2_RBX1_39_32 species=Methanoregula formicica genus=Methanoregula taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Ni,Fe-hydrogenase III small subunit Tax=GWF2_RBX1_38_17_curated
Ni,Fe-hydrogenase III small subunit
GWE2_RBX1_39_32_gwe2_scaffold_764_20
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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18796..19194
DNA (399bp) protein (133aa)
NADH dehydrogenase (Ubiquinone) 30 kDa subunit id=2160316 bin=GWE2_RBX1_39_32 species=Methanoplanus petrolearius genus=Methanoplanus taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
NADH:ubiquinone oxidoreductase 27 kD subunit Tax=GWF2_RBX1_38_17_curated
NADH dehydrogenase (ubiquinone) 30 kDa subunit
GWE2_RBX1_39_32_gwe2_scaffold_764_21
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

19198..20277
DNA (1080bp) protein (360aa)
Ni,Fe-hydrogenase III large subunit id=2160318 bin=GWE2_RBX1_39_32 species=Clostridium clariflavum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Ni,Fe-hydrogenase III large subunit Tax=GWF2_RBX1_38_17_curated
Ni,Fe-hydrogenase III large subunit
GWE2_RBX1_39_32_gwe2_scaffold_764_22
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

20287..20607
DNA (321bp) protein (107aa)
4Fe-4S ferredoxin id=2143342 bin=GWD2_RBX1-related_39_127 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
NADH:ubiquinone oxidoreductase chain I-like protein Tax=GWF2_RBX1_38_17_curated
NADH:ubiquinone oxidoreductase chain I-like protein
GWE2_RBX1_39_32_gwe2_scaffold_764_23
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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20719..23202
DNA (2484bp) protein (828aa)
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1); K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1] Tax=GWF2_RBX1_38_17_curated
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1)
K(+)-insensitive pyrophosphate-energized proton pump id=2160322 bin=GWE2_RBX1_39_32 species=Syntrophomonas wolfei genus=Syntrophomonas taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWE2_RBX1_39_32_gwe2_scaffold_764_24
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(23456..23737)
DNA (282bp) protein (94aa)
id=24610031 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
id=24610031 Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_764_25
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(24127..26229)
DNA (2103bp) protein (701aa)
Multi-sensor signal transduction multi-kinase id=2160325 bin=GWE2_RBX1_39_32 species=Pedobacter saltans genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
multi-sensor signal transduction multi-kinase Tax=GWF2_RBX1_38_17_curated
multi-sensor signal transduction multi-kinase
GWE2_RBX1_39_32_gwe2_scaffold_764_26
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(26336..26866)
DNA (531bp) protein (177aa)
id=2160327 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2160327 Tax=GWF2_RBX1_38_17_curated
Displaying 26 items

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