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GWE2_RBX1_39_32_gwe2_scaffold_220

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Displaying items 31-60 of 72 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWE2_RBX1_39_32_gwe2_scaffold_220_29
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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31620..32660
DNA (1041bp) protein (347aa)
Protein RecA id=1792150 bin=GWD2_RBX1-related_39_127 species=unknown genus=unknown taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
RecA protein; K03553 recombination protein RecA Tax=GWF2_RBX1_38_17_curated
recA; protein RecA
GWE2_RBX1_39_32_gwe2_scaffold_220_30
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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32737..34278
DNA (1542bp) protein (514aa)
Ribonuclease Y id=1792151 bin=GWD2_RBX1-related_39_127 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
2,3 cyclic-nucleotide 2-phosphodiesterase; K06950 uncharacterized protein Tax=GWF2_RBX1_38_17_curated
2,3 cyclic-nucleotide 2-phosphodiesterase
GWE2_RBX1_39_32_gwe2_scaffold_220_31
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

34369..35166
DNA (798bp) protein (266aa)
Uncharacterized protein id=1891865 bin=GWE2_RBX1_39_32 species=Pelosinus fermentans genus=Pelosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hydrolase Tax=GWF2_RBX1_38_17_curated
Conserved hypothetical protein CHP00282
GWE2_RBX1_39_32_gwe2_scaffold_220_32
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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35600..36139
DNA (540bp) protein (180aa)
Cache type 2 domain-containing protein id=1891866 bin=GWE2_RBX1_39_32 species=Sulfurovum sp. AR genus=Sulfurovum taxon_order=unknown taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
methyl-accepting chemotaxis sensory transducer; K03406 methyl-accepting chemotaxis protein Tax=GWF2_RBX1_38_17_curated
methyl-accepting chemotaxis sensory transducer
GWE2_RBX1_39_32_gwe2_scaffold_220_33
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(36266..37369)
DNA (1104bp) protein (368aa)
Flagellar motor switch protein FliM id=1891867 bin=GWE2_RBX1_39_32 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
flagellar motor switch protein FliM; K02416 flagellar motor switch protein FliM Tax=GWF2_RBX1_38_17_curated
flagellar motor switch protein FliM
GWE2_RBX1_39_32_gwe2_scaffold_220_34
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(37598..38440)
DNA (843bp) protein (281aa)
HDIG domain protein id=1891868 bin=GWE2_RBX1_39_32 species=Clostridium ultunense genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
HDIG domain-containing protein Tax=GWF2_RBX1_38_17_curated
HDIG domain-containing protein
GWE2_RBX1_39_32_gwe2_scaffold_220_35
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(38478..39272)
DNA (795bp) protein (265aa)
chemotaxis protein CheR (EC:2.1.1.80); K00575 chemotaxis protein methyltransferase CheR [EC:2.1.1.80] id=24609644 bin=RAAC11 species=Sporomusa ovata genus=Sporomusa taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
chemotaxis protein CheR (EC:2.1.1.80); K00575 chemotaxis protein methyltransferase CheR [EC:2.1.1.80] Tax=GWF2_RBX1_38_17_curated
MCP methyltransferase, CheR-type (EC:2.1.1.80)
GWE2_RBX1_39_32_gwe2_scaffold_220_36
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(39272..40324)
DNA (1053bp) protein (351aa)
response regulator receiver modulated CheB methylesterase; K03412 two-component system, chemotaxis family, response regulator CheB [EC:3.1.1.61] Tax=GWF2_RBX1_38_17_curated
Chemotaxis response regulator protein-glutamate methylesterase id=1891870 bin=GWE2_RBX1_39_32 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
response regulator receiver modulated CheB methylesterase
GWE2_RBX1_39_32_gwe2_scaffold_220_37
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(40334..40825)
DNA (492bp) protein (164aa)
protein CheD (EC:3.5.1.44); K03411 chemotaxis protein CheD [EC:3.5.1.44] Tax=GWF2_RBX1_38_17_curated
protein CheD (EC:3.5.1.44)
Probable chemoreceptor glutamine deamidase CheD id=1891871 bin=GWE2_RBX1_39_32 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWE2_RBX1_39_32_gwe2_scaffold_220_38
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(40818..41477)
DNA (660bp) protein (220aa)
CheC family chemotaxis protein id=1891872 bin=GWE2_RBX1_39_32 species=Selenomonas sp. oral taxon 149 genus=Selenomonas taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
CheC, inhibitor of MCP methylation; K03410 chemotaxis protein CheC Tax=GWF2_RBX1_38_17_curated
cheC; chemotaxis signal transduction protein
GWE2_RBX1_39_32_gwe2_scaffold_220_39
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(41499..42293)
DNA (795bp) protein (265aa)
Chaperone protein id=1792211 bin=GWD2_RBX1-related_39_127 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
heat shock protein Tax=GWF2_RBX1_38_17_curated
integrase
GWE2_RBX1_39_32_gwe2_scaffold_220_40
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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42514..42876
DNA (363bp) protein (121aa)
Putative uncharacterized protein id=1891874 bin=GWE2_RBX1_39_32 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein; K09137 hypothetical protein Tax=GWF2_RBX1_38_17_curated
protein of unknown function DUF190
GWE2_RBX1_39_32_gwe2_scaffold_220_41
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(43053..44516)
DNA (1464bp) protein (488aa)
lysyl-tRNA synthetase (class II); K04567 lysyl-tRNA synthetase, class II [EC:6.1.1.6] Tax=GWF2_RBX1_38_17_curated
Lysine--tRNA ligase id=1891875 bin=GWE2_RBX1_39_32 species=Clostridium clariflavum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
lysyl-tRNA synthetase (class II)
GWE2_RBX1_39_32_gwe2_scaffold_220_42
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(44555..45532)
DNA (978bp) protein (326aa)
tRNA-dihydrouridine synthase id=1891876 bin=GWE2_RBX1_39_32 species=Desulfotomaculum acetoxidans genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
nifR3 family TIM-barrel protein Tax=GWF2_RBX1_38_17_curated
nifR3 family TIM-barrel protein
GWE2_RBX1_39_32_gwe2_scaffold_220_43
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(45541..46275)
DNA (735bp) protein (245aa)
coaX; pantothenate kinase (EC:2.7.1.33); K03525 type III pantothenate kinase [EC:2.7.1.33] Tax=GWF2_RBX1_38_17_curated
coaX; pantothenate kinase (EC:2.7.1.33)
Type III pantothenate kinase id=1891924 bin=GWE2_RBX1_39_32 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWE2_RBX1_39_32_gwe2_scaffold_220_44
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(46316..47341)
DNA (1026bp) protein (342aa)
id=1891925 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1891925 Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_220_45
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(47471..48595)
DNA (1125bp) protein (375aa)
Putative prokaryotic ATPase id=1891926 bin=GWE2_RBX1_39_32 species=uncultured archaeon genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
ATPase; K06921 Tax=GWF2_RBX1_38_17_curated
ATPase
GWE2_RBX1_39_32_gwe2_scaffold_220_46
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(48732..49622)
DNA (891bp) protein (297aa)
RluA; pseudouridylate synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] Tax=GWF2_RBX1_38_17_curated
Pseudouridine synthase id=4253022 bin=GWF2_OP9-related_38_17 species=Caldanaerobacter subterraneus genus=Caldanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
RluA; pseudouridylate synthase
GWE2_RBX1_39_32_gwe2_scaffold_220_47
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(49609..50100)
DNA (492bp) protein (164aa)
lipoprotein signal peptidase; K03101 signal peptidase II [EC:3.4.23.36] Tax=GWF2_RBX1_38_17_curated
Lipoprotein signal peptidase id=1891928 bin=GWE2_RBX1_39_32 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
lipoprotein signal peptidase
GWE2_RBX1_39_32_gwe2_scaffold_220_48
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(50279..51478)
DNA (1200bp) protein (400aa)
pgk; phosphoglycerate kinase (EC:2.7.2.3); K00927 phosphoglycerate kinase [EC:2.7.2.3] Tax=GWF2_RBX1_38_17_curated
pgk; phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase id=1792220 bin=GWD2_RBX1-related_39_127 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWE2_RBX1_39_32_gwe2_scaffold_220_49
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

51670..53769
DNA (2100bp) protein (700aa)
TPR repeat protein id=1891930 bin=GWE2_RBX1_39_32 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWE2_RBX1_39_32_gwe2_scaffold_220_50
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

53782..55395
DNA (1614bp) protein (538aa)
id=1891931 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1891931 Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_220_51
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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55445..56209
DNA (765bp) protein (255aa)
TonB protein id=4253031 bin=GWF2_OP9-related_38_17 species=Vibrio sp. 16 genus=Vibrio taxon_order=Vibrionales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
Protein tonB2 Tax=GWF2_RBX1_38_17_curated
Protein tonB2
GWE2_RBX1_39_32_gwe2_scaffold_220_52
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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56621..58729
DNA (2109bp) protein (703aa)
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] Tax=GWF2_RBX1_38_17_curated
Transcription-repair coupling factor id=1792224 bin=GWD2_RBX1-related_39_127 species=Alicyclobacillus acidocaldarius genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
transcription-repair coupling factor
GWE2_RBX1_39_32_gwe2_scaffold_220_53
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

58901..60169
DNA (1269bp) protein (423aa)
PpiC-type peptidyl-prolyl cis-trans isomerase; K03769 peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] Tax=GWF2_RBX1_38_17_curated
PpiC-type peptidyl-prolyl cis-trans isomerase id=1891934 bin=GWE2_RBX1_39_32 species=Flexistipes sinusarabici genus=Flexistipes taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
PpiC-type peptidyl-prolyl cis-trans isomerase
GWE2_RBX1_39_32_gwe2_scaffold_220_54
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

60159..60959
DNA (801bp) protein (267aa)
MazG family protein id=4253037 bin=GWF2_OP9-related_38_17 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
MazG family protein; K02499 tetrapyrrole methylase family protein / MazG family protein Tax=GWF2_RBX1_38_17_curated
MazG family protein
GWE2_RBX1_39_32_gwe2_scaffold_220_55
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

61019..61339
DNA (321bp) protein (107aa)
Septum formation initiator id=1891936 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Septum formation initiator Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_220_56
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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61364..61858
DNA (495bp) protein (165aa)
hypothetical protein; K07571 S1 RNA binding domain protein id=24609623 bin=RAAC11 species=Bacillus sp. 10403023 genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
hypothetical protein; K07571 S1 RNA binding domain protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWE2_RBX1_39_32_gwe2_scaffold_220_trna_1
unknown

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61866..61951
DNA (86bp)
transferRNA
GWE2_RBX1_39_32_gwe2_scaffold_220_57
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

62109..62873
DNA (765bp) protein (255aa)
id=1891938 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1792231 Tax=GWF2_RBX1_38_17_curated
Displaying items 31-60 of 72 in total

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