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GWE2_RBX1_39_32_gwe2_scaffold_220

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Displaying items 1-30 of 72 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWE2_RBX1_39_32_gwe2_scaffold_220_trna_4
unknown

Not on your lists

comp(138..219)
DNA (82bp)
transferRNA
GWE2_RBX1_39_32_gwe2_scaffold_220_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

515..1213
DNA (699bp) protein (233aa)
Uncharacterized protein id=1891762 bin=GWE2_RBX1_39_32 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
type 11 methyltransferase Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWE2_RBX1_39_32_gwe2_scaffold_220_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

1215..2468
DNA (1254bp) protein (418aa)
Transposase id=1891763 bin=GWE2_RBX1_39_32 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
glycosyl transferase family protein Tax=GWF2_RBX1_38_17_curated
glycosyl transferase family protein
GWE2_RBX1_39_32_gwe2_scaffold_220_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(2905..4008)
DNA (1104bp) protein (368aa)
group 1 glycosyl transferase id=24609676 bin=RAAC11 species=Brevibacillus panacihumi genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
group 1 glycosyl transferase Tax=GWF2_RBX1_38_17_curated
glycosyl transferase group 1
GWE2_RBX1_39_32_gwe2_scaffold_220_trna_3
unknown

Not on your lists

comp(4139..4211)
DNA (73bp)
transferRNA
GWE2_RBX1_39_32_gwe2_scaffold_220_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

4385..4855
DNA (471bp) protein (157aa)
Tfp pilus assembly protein, major pilin PilA id=1891765 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Tfp pilus assembly protein, major pilin PilA; K02456 general secretion pathway protein G Tax=GWF2_RBX1_38_17_curated
Tfp pilus assembly protein, major pilin PilA
GWE2_RBX1_39_32_gwe2_scaffold_220_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

5047..6765
DNA (1719bp) protein (573aa)
Type IV pilus assembly protein PilM id=1891766 bin=GWE2_RBX1_39_32 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
type IV pilus assembly protein PilM; K02662 type IV pilus assembly protein PilM Tax=GWF2_RBX1_38_17_curated
type IV pilus assembly protein PilM
GWE2_RBX1_39_32_gwe2_scaffold_220_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

6786..7400
DNA (615bp) protein (205aa)
id=1891767 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1891767 Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_220_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(7397..8551)
DNA (1155bp) protein (385aa)
Chaperone protein DnaJ id=1891768 bin=GWE2_RBX1_39_32 species=Bacillus smithii genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
dnaJ; chaperone protein DnaJ; K03686 molecular chaperone DnaJ Tax=GWF2_RBX1_38_17_curated
dnaJ; molecular chaperone DnaJ
GWE2_RBX1_39_32_gwe2_scaffold_220_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(8634..10541)
DNA (1908bp) protein (636aa)
Chaperone protein DnaK id=1891770 bin=GWE2_RBX1_39_32 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
chaperone protein DnaK; K04043 molecular chaperone DnaK Tax=GWF2_RBX1_38_17_curated
chaperone protein DnaK
GWE2_RBX1_39_32_gwe2_scaffold_220_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(10560..11195)
DNA (636bp) protein (212aa)
Protein GrpE id=1891772 bin=GWE2_RBX1_39_32 species=Caldalkalibacillus thermarum genus=Caldalkalibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GrpE protein; K03687 molecular chaperone GrpE Tax=GWF2_RBX1_38_17_curated
grpE; molecular chaperone GrpE
GWE2_RBX1_39_32_gwe2_scaffold_220_10
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(11208..12245)
DNA (1038bp) protein (346aa)
Heat-inducible transcription repressor HrcA id=1891774 bin=GWE2_RBX1_39_32 species=Desulfotomaculum reducens genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
heat-inducible transcription repressor HrcA; K03705 heat-inducible transcriptional repressor Tax=GWF2_RBX1_38_17_curated
heat-inducible transcription repressor HrcA
GWE2_RBX1_39_32_gwe2_scaffold_220_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

12525..14669
DNA (2145bp) protein (715aa)
CheA signal transduction histidine kinase id=1792088 bin=GWD2_RBX1-related_39_127 species=Thermoanaerobacterium thermosaccharolyticum genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
CheA signal transduction histidine kinase Tax=GWF2_RBX1_38_17_curated
CheA signal transduction histidine kinase
GWE2_RBX1_39_32_gwe2_scaffold_220_12
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

14704..15084
DNA (381bp) protein (127aa)
Response regulator receiver domain protein id=1891780 bin=GWE2_RBX1_39_32 species=Treponema vincentii genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
cheY; chemotaxis protein CheY Tax=GWF2_RBX1_38_17_curated
chemotaxis protein CheY
GWE2_RBX1_39_32_gwe2_scaffold_220_13
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

15127..15588
DNA (462bp) protein (154aa)
CheC domain protein id=1891783 bin=GWE2_RBX1_39_32 species=Treponema brennaborense genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
CheC domain-containing protein; K03409 chemotaxis protein CheX Tax=GWF2_RBX1_38_17_curated
CheC domain-containing protein
GWE2_RBX1_39_32_gwe2_scaffold_220_14
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(15577..17352)
DNA (1776bp) protein (592aa)
Endoglucanase Y Tax=GWF2_RBX1_38_17_curated
Endoglucanase Y id=1891786 bin=GWE2_RBX1_39_32 species=Clostridium sp. Maddingley MBC34-26 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWE2_RBX1_39_32_gwe2_scaffold_220_15
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

17705..17989
DNA (285bp) protein (95aa)
Invasion associated locus B family protein id=1891789 bin=GWE2_RBX1_39_32 species=Paracoccus denitrificans genus=Paracoccus taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
invasion associated locus B family protein Tax=GWF2_RBX1_38_17_curated
invasion associated locus B family protein
GWE2_RBX1_39_32_gwe2_scaffold_220_16
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(18564..19151)
DNA (588bp) protein (196aa)
id=24609663 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
id=24609663 Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_220_17
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(19253..19639)
DNA (387bp) protein (129aa)
Stage II sporulation protein id=1891793 bin=GWE2_RBX1_39_32 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
anti-sigma-factor antagonist; K04749 anti-sigma B factor antagonist Tax=GWF2_RBX1_38_17_curated
anti-sigma-factor antagonist
GWE2_RBX1_39_32_gwe2_scaffold_220_18
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(19696..22437)
DNA (2742bp) protein (914aa)
GAF domain / stage II sporulation protein E multi-domain protein id=1891852 bin=GWE2_RBX1_39_32 species=unknown genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
serine/threonine phosphatase; K07315 sigma-B regulation protein RsbU (phosphoserine phosphatase) Tax=GWF2_RBX1_38_17_curated
serine/threonine phosphatase containing GAF domains
GWE2_RBX1_39_32_gwe2_scaffold_220_19
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(22710..22898)
DNA (189bp) protein (63aa)
id=24609660 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
id=24609660 Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_220_20
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(22885..23226)
DNA (342bp) protein (114aa)
id=1891854 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1891854 Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_220_21
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(23239..23652)
DNA (414bp) protein (138aa)
id=1891855 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1891855 Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_220_22
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

23892..26375
DNA (2484bp) protein (828aa)
Methionine synthase id=1891856 bin=GWE2_RBX1_39_32 species=Halobacteroides halobius genus=Halobacteroides taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Homocysteine S-methyltransferase/B12 binding domain/Pterin binding enzyme Tax=GWF2_RBX1_38_17_curated
Homocysteine S-methyltransferase/B12 binding domain/Pterin binding enzyme
GWE2_RBX1_39_32_gwe2_scaffold_220_23
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

26375..27310
DNA (936bp) protein (312aa)
id=1891857 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1891857 Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_220_24
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

27478..28647
DNA (1170bp) protein (390aa)
S-adenosylmethionine synthetase; K00789 S-adenosylmethionine synthetase [EC:2.5.1.6] Tax=GWF2_RBX1_38_17_curated
methionine adenosyltransferase id=1792145 bin=GWD2_RBX1-related_39_127 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
S-adenosylmethionine synthetase
GWE2_RBX1_39_32_gwe2_scaffold_220_25
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

28702..29193
DNA (492bp) protein (164aa)
UPF0234 protein DesdiDRAFT_3264 id=1891859 bin=GWE2_RBX1_39_32 species=Desulfitobacterium dichloroeliminans genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWE2_RBX1_39_32_gwe2_scaffold_220_26
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

29200..30513
DNA (1314bp) protein (438aa)
tRNA modifying protein; K14441 ribosomal protein S12 methylthiotransferase [EC:2.-.-.-] id=24609653 bin=RAAC11 species=unknown genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
tRNA modifying protein; K14441 ribosomal protein S12 methylthiotransferase [EC:2.-.-.-] Tax=GWF2_RBX1_38_17_curated
MiaB-like tRNA modifying enzyme YliG
GWE2_RBX1_39_32_gwe2_scaffold_220_27
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

30510..31031
DNA (522bp) protein (174aa)
cdp-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5); K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] Tax=GWF2_RBX1_38_17_curated
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase id=1792148 bin=GWD2_RBX1-related_39_127 species=Brevibacillus laterosporus genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWE2_RBX1_39_32_gwe2_scaffold_220_28
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

31021..31560
DNA (540bp) protein (180aa)
Putative competence-damage inducible protein id=1792149 bin=GWD2_RBX1-related_39_127 species=unknown genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
competence/damage-inducible protein CinA-like protein Tax=GWF2_RBX1_38_17_curated
competence/damage-inducible protein CinA-like protein
Displaying items 1-30 of 72 in total

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