ggKbase home page

GWE2_RBX1_39_32_gwe2_scaffold_831

Search features with annotation key words

Displaying items 1-30 of 33 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWE2_RBX1_39_32_gwe2_scaffold_831_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

3..386
DNA (384bp) protein (128aa)
id=2172628 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=24610015 Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_831_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

642..1436
DNA (795bp) protein (265aa)
id=2172629 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2172629 Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_831_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(1495..2319)
DNA (825bp) protein (275aa)
undecaprenol kinase; K06153 undecaprenyl-diphosphatase [EC:3.6.1.27] Tax=GWF2_RBX1_38_17_curated
Undecaprenyl-diphosphatase id=2172630 bin=GWE2_RBX1_39_32 species=Leptotrichia goodfellowii genus=Leptotrichia taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
undecaprenol kinase
GWE2_RBX1_39_32_gwe2_scaffold_831_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(2465..3163)
DNA (699bp) protein (233aa)
Polysaccharide deacetylase family sporulation protein PdaB id=2172632 bin=GWE2_RBX1_39_32 species=unknown genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
polysaccharide deacetylase family sporulation protein PdaB Tax=GWF2_RBX1_38_17_curated
polysaccharide deacetylase family sporulation protein PdaB
GWE2_RBX1_39_32_gwe2_scaffold_831_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(3313..4320)
DNA (1008bp) protein (336aa)
Beta-lactamase id=2172634 bin=GWE2_RBX1_39_32 species=unknown genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
beta-lactamase Tax=GWF2_RBX1_38_17_curated
beta-lactamase
GWE2_RBX1_39_32_gwe2_scaffold_831_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(4863..5036)
DNA (174bp) protein (58aa)
id=2172636 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2172636 Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_831_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(5279..5545)
DNA (267bp) protein (89aa)
PQ loop repeat protein id=2143305 bin=GWD2_RBX1-related_39_127 species=Desulfosporosinus youngiae genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWE2_RBX1_39_32_gwe2_scaffold_831_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(5707..5979)
DNA (273bp) protein (91aa)
id=2172639 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2172639 Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_831_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(6363..6551)
DNA (189bp) protein (63aa)
Uncharacterized protein id=2172640 bin=GWE2_RBX1_39_32 species=Methanoculleus bourgensis genus=Methanoculleus taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWE2_RBX1_39_32_gwe2_scaffold_831_trna_1
unknown

Not on your lists

6915..6987
DNA (73bp)
transferRNA
GWE2_RBX1_39_32_gwe2_scaffold_831_10
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(7801..8925)
DNA (1125bp) protein (375aa)
Cysteine desulfurase id=2172642 bin=GWE2_RBX1_39_32 species=Halobacteroides halobius genus=Halobacteroides taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
cysteine desulfurase family protein Tax=GWF2_RBX1_38_17_curated
cysteine desulfurase family protein
GWE2_RBX1_39_32_gwe2_scaffold_831_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(8947..9279)
DNA (333bp) protein (111aa)
Putative uncharacterized protein id=2172644 bin=GWE2_RBX1_39_32 species=Desulfitobacterium metallireducens genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWE2_RBX1_39_32_gwe2_scaffold_831_12
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(9298..9948)
DNA (651bp) protein (217aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein id=2172646 bin=GWE2_RBX1_39_32 species=unknown genus=Caldicellulosiruptor taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
4Fe-4S ferredoxin Tax=GWF2_RBX1_38_17_curated
4Fe-4S ferredoxin
GWE2_RBX1_39_32_gwe2_scaffold_831_13
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(9966..10295)
DNA (330bp) protein (110aa)
Regulatory protein ArsR id=1810639 bin=GWD2_RBX1-related_39_127 species=Haloplasma contractile genus=Haloplasma taxon_order=Haloplasmatales taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
ArsR family transcriptional regulator; K03892 ArsR family transcriptional regulator Tax=GWF2_RBX1_38_17_curated
ArsR family transcriptional regulator
GWE2_RBX1_39_32_gwe2_scaffold_831_14
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

10431..10865
DNA (435bp) protein (145aa)
Transcriptional regulatory protein id=2172650 bin=GWE2_RBX1_39_32 species=Clostridium tetani genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
transcriptional regulatory protein; K07658 two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP Tax=GWF2_RBX1_38_17_curated
transcriptional regulatory protein
GWE2_RBX1_39_32_gwe2_scaffold_831_15
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(10883..11113)
DNA (231bp) protein (77aa)
Helix-turn-helix domain-containing protein id=2172652 bin=GWE2_RBX1_39_32 species=Zunongwangia profunda genus=Zunongwangia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Helix-turn-helix domain-containing protein Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_831_16
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

11229..11585
DNA (357bp) protein (119aa)
Response regulator/phosphatase id=2172654 bin=GWE2_RBX1_39_32 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
response regulator receiver protein; K03413 two-component system, chemotaxis family, response regulator CheY Tax=GWF2_RBX1_38_17_curated
response regulator receiver protein
GWE2_RBX1_39_32_gwe2_scaffold_831_17
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(11720..13168)
DNA (1449bp) protein (483aa)
Na+/H+ antiporter id=1810643 bin=GWD2_RBX1-related_39_127 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
potassium/proton antiporter; K11105 cell volume regulation protein A Tax=GWF2_RBX1_38_17_curated
potassium/proton antiporter
GWE2_RBX1_39_32_gwe2_scaffold_831_18
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(13229..13690)
DNA (462bp) protein (154aa)
Uncharacterized protein id=2172658 bin=GWE2_RBX1_39_32 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWE2_RBX1_39_32_gwe2_scaffold_831_19
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(13770..14048)
DNA (279bp) protein (93aa)
id=2172660 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2172660 Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_831_20
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(14215..14469)
DNA (255bp) protein (85aa)
id=2172661 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2172661 Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_831_21
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(14466..15884)
DNA (1419bp) protein (473aa)
F0F1 ATP synthase subunit beta (EC:3.6.3.14); K02112 F-type H+-transporting ATPase subunit beta [EC:3.6.3.14] Tax=GWF2_RBX1_38_17_curated
ATP synthase subunit beta id=1810647 bin=GWD2_RBX1-related_39_127 species=Pelosinus fermentans genus=Pelosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
ATP synthase subunit beta
GWE2_RBX1_39_32_gwe2_scaffold_831_22
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(15890..16783)
DNA (894bp) protein (298aa)
atpG; ATP synthase F1, gamma subunit (EC:3.6.3.14) Tax=GWF2_RBX1_38_17_curated
atpG; ATP synthase F1, gamma subunit (EC:3.6.3.14)
ATP synthase gamma chain, sodium ion specific id=2172689 bin=GWE2_RBX1_39_32 species=Propionigenium modestum genus=Propionigenium taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWE2_RBX1_39_32_gwe2_scaffold_831_23
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(16783..18342)
DNA (1560bp) protein (520aa)
atpA; ATP synthase F1 complex subunit alpha (EC:3.6.3.14) Tax=GWF2_RBX1_38_17_curated
atpA; ATP synthase F1 complex subunit alpha (EC:3.6.3.14)
ATP synthase F1 complex subunit alpha id=2172691 bin=GWE2_RBX1_39_32 species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWE2_RBX1_39_32_gwe2_scaffold_831_24
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(18358..18897)
DNA (540bp) protein (180aa)
ATP synthase F1 subunit delta (EC:3.6.3.14); K02113 F-type H+-transporting ATPase subunit delta [EC:3.6.3.14] Tax=GWF2_RBX1_38_17_curated
ATP synthase subunit 5 id=2172693 bin=GWE2_RBX1_39_32 species=Clostridium ultunense genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
atpH; ATP synthase subunit delta, sodium ion specific
GWE2_RBX1_39_32_gwe2_scaffold_831_25
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(18881..19381)
DNA (501bp) protein (167aa)
atpF; ATP synthase F0 subunit B (EC:3.6.3.14); K02109 F-type H+-transporting ATPase subunit b [EC:3.6.3.14] Tax=GWF2_RBX1_38_17_curated
atpF; ATP synthase F0 subunit B (EC:3.6.3.14)
ATP synthase subunit b id=4157997 bin=GWF2_OP9-related_38_17 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
GWE2_RBX1_39_32_gwe2_scaffold_831_26
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(19397..19630)
DNA (234bp) protein (78aa)
ATP synthase F0 subunit C; K02110 F-type H+-transporting ATPase subunit c [EC:3.6.3.14] Tax=GWF2_RBX1_38_17_curated
ATP synthase F0, C subunit id=2172697 bin=GWE2_RBX1_39_32 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
ATP synthase F0 subunit C
GWE2_RBX1_39_32_gwe2_scaffold_831_27
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(19647..20354)
DNA (708bp) protein (236aa)
ATP synthase F0, subunit A; K02108 F-type H+-transporting ATPase subunit a [EC:3.6.3.14] Tax=GWF2_RBX1_38_17_curated
ATP synthase subunit a id=2172699 bin=GWE2_RBX1_39_32 species=Leptospirillum ferrooxidans genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
ATP synthase F0 subunit A
GWE2_RBX1_39_32_gwe2_scaffold_831_28
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

20603..21391
DNA (789bp) protein (263aa)
thymidylate kinase; K00943 dTMP kinase [EC:2.7.4.9] Tax=GWF2_RBX1_38_17_curated
tmk; putative thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase id=2172701 bin=GWE2_RBX1_39_32 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWE2_RBX1_39_32_gwe2_scaffold_831_29
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

21343..21987
DNA (645bp) protein (215aa)
thymidylate kinase (EC:2.7.4.9) Tax=GWF2_RBX1_38_17_curated
thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase id=2172703 bin=GWE2_RBX1_39_32 species=Mahella australiensis genus=Mahella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Displaying items 1-30 of 33 in total

View Taxonomy