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GWE2_RBX1_39_32_gwe2_scaffold_263

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Displaying items 1-30 of 53 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWE2_RBX1_39_32_gwe2_scaffold_263_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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116..1069
DNA (954bp) protein (318aa)
ABC transporter related protein id=1922823 bin=GWE2_RBX1_39_32 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
ABC transporter; K09687 antibiotic transport system ATP-binding protein Tax=GWF2_RBX1_38_17_curated
ABC transporter ATPase
GWE2_RBX1_39_32_gwe2_scaffold_263_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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1066..1782
DNA (717bp) protein (239aa)
Predicted ABC transporter, permease protein id=1922825 bin=GWE2_RBX1_39_32 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
ABC transporter permease Tax=GWF2_RBX1_38_17_curated
ABC transporter permease
GWE2_RBX1_39_32_gwe2_scaffold_263_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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1773..3338
DNA (1566bp) protein (522aa)
ABC-type uncharacterized transport system involved in gliding motility auxiliary component-like protein id=1922828 bin=GWE2_RBX1_39_32 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
ABC transporter Tax=GWF2_RBX1_38_17_curated
ABC transporter
GWE2_RBX1_39_32_gwe2_scaffold_263_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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3473..4381
DNA (909bp) protein (303aa)
id=1922830 bin=GWE2_RBX1_39_32 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1922830 Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_263_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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4628..4819
DNA (192bp) protein (64aa)
id=1922831 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1922831 Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_263_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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4948..6057
DNA (1110bp) protein (370aa)
DegV family protein id=1922832 bin=GWE2_RBX1_39_32 species=Bacillus selenitireducens genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
DegV family protein Tax=GWF2_RBX1_38_17_curated
DegV family protein
GWE2_RBX1_39_32_gwe2_scaffold_263_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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6357..6887
DNA (531bp) protein (177aa)
Putative uncharacterized protein id=1922834 bin=GWE2_RBX1_39_32 species=Clostridium carboxidivorans genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein; K07040 uncharacterized protein Tax=GWF2_RBX1_38_17_curated
protein of unknown function DUF177
GWE2_RBX1_39_32_gwe2_scaffold_263_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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7087..8070
DNA (984bp) protein (328aa)
fatty acid/phospholipid synthesis protein PlsX; K03621 glycerol-3-phosphate acyltransferase PlsX [EC:2.3.1.15] Tax=GWF2_RBX1_38_17_curated
Phosphate acyltransferase id=1922837 bin=GWE2_RBX1_39_32 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
fatty acid/phospholipid synthesis protein PlsX
GWE2_RBX1_39_32_gwe2_scaffold_263_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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8090..9091
DNA (1002bp) protein (334aa)
3-oxoacyl-(acyl-carrier-protein) synthase III (EC:2.3.1.41); K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] Tax=GWF2_RBX1_38_17_curated
3-oxoacyl-[acyl-carrier-protein] synthase 3 id=1922838 bin=GWE2_RBX1_39_32 species=Mitsuokella multacida genus=Mitsuokella taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
3-oxoacyl-ACP synthase
GWE2_RBX1_39_32_gwe2_scaffold_263_10
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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9195..10355
DNA (1161bp) protein (387aa)
acyl-CoA dehydrogenase, short-chain specific (EC:1.3.99.2) Tax=GWF2_RBX1_38_17_curated
Acyl-CoA dehydrogenase, short-chain specific id=1922839 bin=GWE2_RBX1_39_32 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
acyl-CoA dehydrogenase, short-chain specific
GWE2_RBX1_39_32_gwe2_scaffold_263_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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10420..11205
DNA (786bp) protein (262aa)
Electron transfer flavoprotein alpha/beta-subunit id=1922840 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
electron transfer flavoprotein, beta subunit Tax=GWF2_RBX1_38_17_curated
electron transfer flavoprotein, beta subunit
GWE2_RBX1_39_32_gwe2_scaffold_263_12
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

11217..12389
DNA (1173bp) protein (391aa)
Electron transfer flavoprotein alpha/beta-subunit id=1922841 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
electron transfer flavoprotein subunit alpha/beta; K03522 electron transfer flavoprotein alpha subunit Tax=GWF2_RBX1_38_17_curated
electron transfer flavoprotein subunit alpha/beta
GWE2_RBX1_39_32_gwe2_scaffold_263_13
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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12391..13239
DNA (849bp) protein (283aa)
malonyl CoA-acyl carrier protein transacylase; K00645 [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] Tax=GWF2_RBX1_38_17_curated
malonyl CoA-acyl carrier protein transacylase id=1922842 bin=GWE2_RBX1_39_32 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
malonyl CoA-acyl carrier protein transacylase
GWE2_RBX1_39_32_gwe2_scaffold_263_14
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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13236..13976
DNA (741bp) protein (247aa)
fabG; 3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100); K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=GWF2_RBX1_38_17_curated
3-oxoacyl-(Acyl-carrier-protein) reductase id=1922843 bin=GWE2_RBX1_39_32 species=unknown genus=Listeria taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
fabG; 3-oxoacyl-ACP reductase
GWE2_RBX1_39_32_gwe2_scaffold_263_15
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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14021..14260
DNA (240bp) protein (80aa)
Acyl carrier protein id=1922844 bin=GWE2_RBX1_39_32 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
acyl carrier protein; K02078 acyl carrier protein Tax=GWF2_RBX1_38_17_curated
acyl carrier protein
GWE2_RBX1_39_32_gwe2_scaffold_263_16
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

14340..15290
DNA (951bp) protein (317aa)
2-nitropropane dioxygenase NPD id=1831169 bin=GWD2_RBX1-related_39_127 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
2-nitropropane dioxygenase Tax=GWF2_RBX1_38_17_curated
2-nitropropane dioxygenase
GWE2_RBX1_39_32_gwe2_scaffold_263_17
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

15306..16544
DNA (1239bp) protein (413aa)
3-oxoacyl-(acyl-carrier-protein) synthase 2; K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] Tax=GWF2_RBX1_38_17_curated
3-oxoacyl-[acyl-carrier-protein] synthase 2 id=1922846 bin=GWE2_RBX1_39_32 species=unknown genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
3-oxoacyl-(acyl-carrier-protein) synthase 2
GWE2_RBX1_39_32_gwe2_scaffold_263_18
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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16544..17170
DNA (627bp) protein (209aa)
RNase HII; K03470 ribonuclease HII [EC:3.1.26.4] Tax=GWF2_RBX1_38_17_curated
rnhB; Ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII id=1831165 bin=GWD2_RBX1-related_39_127 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWE2_RBX1_39_32_gwe2_scaffold_263_19
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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17181..17525
DNA (345bp) protein (115aa)
UPF0102 protein NAL212_2320 id=1922848 bin=GWE2_RBX1_39_32 species=Nitrosomonas sp. AL212 genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein; K07460 putative endonuclease Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWE2_RBX1_39_32_gwe2_scaffold_263_20
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(17544..19946)
DNA (2403bp) protein (801aa)
Peptidase S8 and S53 subtilisin kexin sedolisin id=1922850 bin=GWE2_RBX1_39_32 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
peptidase S8 and S53 subtilisin kexin sedolisin Tax=GWF2_RBX1_38_17_curated
peptidase S8 and S53 subtilisin kexin sedolisin
GWE2_RBX1_39_32_gwe2_scaffold_263_21
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

20100..21020
DNA (921bp) protein (307aa)
L-lactate dehydrogenase; K00016 L-lactate dehydrogenase [EC:1.1.1.27] Tax=GWF2_RBX1_38_17_curated
L-lactate dehydrogenase id=1922888 bin=GWE2_RBX1_39_32 species=unknown genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
lactate dehydrogenase
GWE2_RBX1_39_32_gwe2_scaffold_263_22
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(21010..25866)
DNA (4857bp) protein (1619aa)
id=1922890 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1922890 Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_263_23
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(26148..27323)
DNA (1176bp) protein (392aa)
putative oxygen-independent coproporphyrinogen III oxidase (EC:1.3.99.22); K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22] id=24610596 bin=RAAC11 species=Clostridium botulinum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
putative oxygen-independent coproporphyrinogen III oxidase (EC:1.3.99.22); K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22] Tax=GWF2_RBX1_38_17_curated
coproporphyrinogen III oxidase (EC:1.3.99.22)
GWE2_RBX1_39_32_gwe2_scaffold_263_24
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(27326..29131)
DNA (1806bp) protein (602aa)
GTP-binding protein LepA; K03596 GTP-binding protein LepA Tax=GWF2_RBX1_38_17_curated
Elongation factor 4 id=1922893 bin=GWE2_RBX1_39_32 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GTP-binding protein LepA
GWE2_RBX1_39_32_gwe2_scaffold_263_25
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(29213..29587)
DNA (375bp) protein (125aa)
Chemotaxis protein cheY id=1831111 bin=GWD2_RBX1-related_39_127 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
chemotaxis protein Y, response regulator CheY Tax=GWF2_RBX1_38_17_curated
chemotaxis protein Y, response regulator CheY
GWE2_RBX1_39_32_gwe2_scaffold_263_26
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(29615..29989)
DNA (375bp) protein (125aa)
Putative chemotaxis response regulator receiver (CheY-like) id=4397721 bin=GWF2_OP9-related_38_17 species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
putative chemotaxis response regulator receiver (CheY-like); K03413 two-component system, chemotaxis family, response regulator CheY Tax=GWF2_RBX1_38_17_curated
chemotaxis protein CheY
GWE2_RBX1_39_32_gwe2_scaffold_263_27
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(29982..30461)
DNA (480bp) protein (160aa)
Hypothetical cytosolic protein id=1922903 bin=GWE2_RBX1_39_32 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
cytoplasmic protein Tax=GWF2_RBX1_38_17_curated
cytoplasmic protein
GWE2_RBX1_39_32_gwe2_scaffold_263_28
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(30627..31670)
DNA (1044bp) protein (348aa)
response regulator receiver modulated chemotaxis protein CheB (EC:3.1.1.61); K03412 two-component system, chemotaxis family, response regulator CheB [EC:3.1.1.61] Tax=GWF2_RBX1_38_17_curated
response regulator receiver modulated chemotaxis protein CheB (EC:3.1.1.61)
Chemotaxis response regulator protein-glutamate methylesterase id=1922906 bin=GWE2_RBX1_39_32 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWE2_RBX1_39_32_gwe2_scaffold_263_29
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(31756..32607)
DNA (852bp) protein (284aa)
Putative signal transduction protein id=1922909 bin=GWE2_RBX1_39_32 species=Desulfovibrio fructosivorans genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWE2_RBX1_39_32_gwe2_scaffold_263_30
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(32604..33083)
DNA (480bp) protein (160aa)
CheD, stimulates methylation of MCP protein; K03411 chemotaxis protein CheD [EC:3.5.1.44] Tax=GWF2_RBX1_38_17_curated
Probable chemoreceptor glutamine deamidase CheD id=1922912 bin=GWE2_RBX1_39_32 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
CheD, stimulates methylation of MCP protein
Displaying items 1-30 of 53 in total

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