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GWE2_RBX1_39_32_gwe2_scaffold_336

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Displaying items 1-30 of 107 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWE2_RBX1_39_32_gwe2_scaffold_336_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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3..8255
DNA (8253bp) protein (2751aa)
Uncharacterized protein DDB_G0284459 id=1973688 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=4312202 Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_336_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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8520..8786
DNA (267bp) protein (89aa)
id=1973689 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1973689 Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_336_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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8851..9984
DNA (1134bp) protein (378aa)
id=1973690 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=4312199 Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_336_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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10064..12385
DNA (2322bp) protein (774aa)
id=1973691 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1973691 Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_336_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(12434..12868)
DNA (435bp) protein (145aa)
ribose-5-phosphate isomerase B (EC:5.3.1.6)
Ribose 5-phosphate isomerase id=1973692 bin=GWE2_RBX1_39_32 species=unknown genus=Fusobacterium taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
ribose 5-phosphate isomerase B Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_336_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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13121..15265
DNA (2145bp) protein (715aa)
RNA binding S1 id=1973693 bin=GWE2_RBX1_39_32 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
probable transcription accessory protein Tax=GWF2_RBX1_38_17_curated
transcriptional accessory protein
GWE2_RBX1_39_32_gwe2_scaffold_336_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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15434..16267
DNA (834bp) protein (278aa)
Uncharacterized protein id=1973694 bin=GWE2_RBX1_39_32 species=Pontibacter sp. BAB1700 genus=Pontibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
GntR family transcriptional regulator
GWE2_RBX1_39_32_gwe2_scaffold_336_trna_6
unknown

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comp(16291..16364)
DNA (74bp)
transferRNA
GWE2_RBX1_39_32_gwe2_scaffold_336_trna_5
unknown

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comp(16442..16513)
DNA (72bp)
transferRNA
GWE2_RBX1_39_32_gwe2_scaffold_336_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

16768..17394
DNA (627bp) protein (209aa)
DNA uptake protein related DNA-binding protein id=1973695 bin=GWE2_RBX1_39_32 species=Bacillus smithii genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
DNA uptake protein related DNA-binding protein; K02237 competence protein ComEA Tax=GWF2_RBX1_38_17_curated
comEA; ComE operon protein 1
GWE2_RBX1_39_32_gwe2_scaffold_336_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(17398..18027)
DNA (630bp) protein (210aa)
70 kDa peptidyl-prolyl isomerase id=1973696 bin=GWE2_RBX1_39_32 species=Medicago truncatula genus=Medicago taxon_order=Fabales taxon_class=unknown phylum=Streptophyta tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
70 kDa peptidyl-prolyl isomerase Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_336_10
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(18052..19704)
DNA (1653bp) protein (551aa)
PglZ domain-containing protein Tax=GWF2_RBX1_38_17_curated
PglZ domain-containing protein id=1973697 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWE2_RBX1_39_32_gwe2_scaffold_336_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(19692..22457)
DNA (2766bp) protein (922aa)
bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon id=1973698 bin=GWE2_RBX1_39_32 species=Ornithinibacillus scapharcae genus=Ornithinibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon Tax=GWF2_RBX1_38_17_curated
bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon
GWE2_RBX1_39_32_gwe2_scaffold_336_12
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(22522..23808)
DNA (1287bp) protein (429aa)
GTPase HflX id=1973699 bin=GWE2_RBX1_39_32 species=Simkania negevensis genus=Simkania taxon_order=Chlamydiales taxon_class=Chlamydiia phylum=Chlamydiae tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hflX; GTP-binding protein hflX; K03665 GTP-binding protein HflX Tax=GWF2_RBX1_38_17_curated
hflX; GTP-binding protein hflX
GWE2_RBX1_39_32_gwe2_scaffold_336_13
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(23795..24172)
DNA (378bp) protein (126aa)
Sigma-54 factor interaction domain-containing protein id=1973700 bin=GWE2_RBX1_39_32 species=Clostridium beijerinckii genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
two component, sigma54 specific, Fis family transcriptional regulator; K07714 two-component system, NtrC family, response regulator AtoC Tax=GWF2_RBX1_38_17_curated
two component, sigma54 specific, Fis family transcriptional regulator
GWE2_RBX1_39_32_gwe2_scaffold_336_14
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(24165..25202)
DNA (1038bp) protein (346aa)
glycerol 3-phosphate dehydrogenase; K00057 glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] Tax=GWF2_RBX1_38_17_curated
Glycerol-3-phosphate dehydrogenase [NAD(P)+] id=1973701 bin=GWE2_RBX1_39_32 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
ketopantoate reductase PanE/ApbA family protein
GWE2_RBX1_39_32_gwe2_scaffold_336_15
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(25199..25789)
DNA (591bp) protein (197aa)
acyl-phosphate glycerol-3-phosphate acyltransferase; K08591 glycerol-3-phosphate acyltransferase PlsY [EC:2.3.1.15] Tax=GWF2_RBX1_38_17_curated
Glycerol-3-phosphate acyltransferase id=1973702 bin=GWE2_RBX1_39_32 species=Ilyobacter polytropus genus=Ilyobacter taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
acyl-phosphate glycerol-3-phosphate acyltransferase
GWE2_RBX1_39_32_gwe2_scaffold_336_16
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(25983..26366)
DNA (384bp) protein (128aa)
Response regulator receiver protein id=1973704 bin=GWE2_RBX1_39_32 species=Natranaerobius thermophilus genus=Natranaerobius taxon_order=Natranaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
response regulator receiver protein Tax=GWF2_RBX1_38_17_curated
response regulator receiver protein
GWE2_RBX1_39_32_gwe2_scaffold_336_17
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(26788..28290)
DNA (1503bp) protein (501aa)
Two component, sigma54 specific, transcriptional regulator, Fis family id=1973706 bin=GWE2_RBX1_39_32 species=Desulfotomaculum acetoxidans genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
two component, sigma54 specific, transcriptional regulator, Fis family; K07714 two-component system, NtrC family, response regulator AtoC Tax=GWF2_RBX1_38_17_curated
two component, sigma54 specific, transcriptional regulator, Fis family
GWE2_RBX1_39_32_gwe2_scaffold_336_18
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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28651..28905
DNA (255bp) protein (85aa)
phosphoribosylformylglycinamidine synthase subunit PurS; K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] Tax=GWF2_RBX1_38_17_curated
Phosphoribosylformylglycinamidine synthase subunit PurS id=1973708 bin=GWE2_RBX1_39_32 species=unknown genus=Cyanothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
phosphoribosylformylglycinamidine synthase subunit PurS
GWE2_RBX1_39_32_gwe2_scaffold_336_19
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

28961..29671
DNA (711bp) protein (237aa)
purQ; phosphoribosylformylglycinamidine synthase large subunit (EC:6.3.5.3); K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] Tax=GWF2_RBX1_38_17_curated
purQ; phosphoribosylformylglycinamidine synthase large subunit (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase 1 id=1756472 bin=GWD2_RBX1-related_39_127 species=Deferribacter desulfuricans genus=Deferribacter taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWE2_RBX1_39_32_gwe2_scaffold_336_20
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

29748..30047
DNA (300bp) protein (100aa)
id=24610790 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
id=24610790 Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_336_21
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

30163..32490
DNA (2328bp) protein (776aa)
DNA internalization-related competence protein ComEC/Rec2 id=1973712 bin=GWE2_RBX1_39_32 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
DNA internalization-related competence protein ComEC/Rec2 Tax=GWF2_RBX1_38_17_curated
DNA internalization-related competence protein ComEC/Rec2
GWE2_RBX1_39_32_gwe2_scaffold_336_22
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(32480..32668)
DNA (189bp) protein (63aa)
id=1973714 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1973714 Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_336_23
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(32839..34260)
DNA (1422bp) protein (474aa)
Putative uncharacterized protein id=1973715 bin=GWE2_RBX1_39_32 species=Natranaerobius thermophilus genus=Natranaerobius taxon_order=Natranaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein; K09749 hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWE2_RBX1_39_32_gwe2_scaffold_336_24
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

34840..37791
DNA (2952bp) protein (984aa)
alpha-glucan phosphorylase (EC:2.4.1.1); K00688 starch phosphorylase [EC:2.4.1.1] Tax=GWF2_RBX1_38_17_curated
alpha-glucan phosphorylase (EC:2.4.1.1)
Alpha-glucan phosphorylase id=1973761 bin=GWE2_RBX1_39_32 species=Thermococcus litoralis genus=Thermococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWE2_RBX1_39_32_gwe2_scaffold_336_25
GWF1_Spirochaetes_49_6_curated, Spirochaetes, Bacteria

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comp(37938..39503)
DNA (1566bp) protein (522aa)
ISPsy6, transposase id=1973763 bin=GWE2_RBX1_39_32 species=unknown genus=Dehalobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Transposase, IS4 family Tax=GWF1_Spirochaetes_49_6_curated
ISPsy6, transposase
GWE2_RBX1_39_32_gwe2_scaffold_336_26
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

39640..40878
DNA (1239bp) protein (413aa)
class I and II aminotransferase; K10206 LL-diaminopimelate aminotransferase [EC:2.6.1.83] id=24610795 bin=RAAC11 species=Desulfovibrio fructosivorans genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RAAC11 organism_group=Unknown_CP
class I and II aminotransferase; K10206 LL-diaminopimelate aminotransferase [EC:2.6.1.83] Tax=GWF2_RBX1_38_17_curated
class I and II aminotransferase
GWE2_RBX1_39_32_gwe2_scaffold_336_27
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

41007..42758
DNA (1752bp) protein (584aa)
aldehyde:ferredoxin oxidoreductase; K03738 aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] Tax=GWF2_RBX1_38_17_curated
Aldehyde:ferredoxin oxidoreductase id=1756464 bin=GWD2_RBX1-related_39_127 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
aldehyde:ferredoxin oxidoreductase
GWE2_RBX1_39_32_gwe2_scaffold_336_28
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

42746..43918
DNA (1173bp) protein (391aa)
Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases id=1756462 bin=GWD2_RBX1-related_39_127 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
ribulose-5-phosphate 4-epimerase and related epimerases and aldolases Tax=GWF2_RBX1_38_17_curated
ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
Displaying items 1-30 of 107 in total

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