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GWE2_RBX1_39_32_gwe2_scaffold_293

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWE2_RBX1_39_32_gwe2_scaffold_293_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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126..611
DNA (486bp) protein (162aa)
Integrase family protein id=1945441 bin=GWE2_RBX1_39_32 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
integrase family protein Tax=GWF2_RBX1_38_17_curated
Phage integrase family protein
GWE2_RBX1_39_32_gwe2_scaffold_293_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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885..1319
DNA (435bp) protein (145aa)
DNA-(Apurinic or apyrimidinic site) lyase / pyrimidine dimer DNA glycosylase id=1945442 bin=GWE2_RBX1_39_32 species=Nitrosomonas sp. genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
DNA-(apurinic or apyrimidinic site) lyase / pyrimidine dimer DNA glycosylase Tax=GWF2_RBX1_38_17_curated
DNA-(apurinic or apyrimidinic site) lyase / pyrimidine dimer DNA glycosylase
GWE2_RBX1_39_32_gwe2_scaffold_293_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

1424..3496
DNA (2073bp) protein (691aa)
methyl-accepting chemotaxis protein Tax=GWF2_RBX1_38_17_curated
Methyl-accepting chemotaxis protein id=1945443 bin=GWE2_RBX1_39_32 species=Desulfosporosinus youngiae genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
methyl-accepting chemotaxis sensory transducer with Cache sensor
GWE2_RBX1_39_32_gwe2_scaffold_293_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(3486..5324)
DNA (1839bp) protein (613aa)
para-aminobenzoate synthase subunit I; K03342 para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38] Tax=GWF2_RBX1_38_17_curated
Para-aminobenzoate synthase, subunit I id=1945445 bin=GWE2_RBX1_39_32 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
para-aminobenzoate synthase subunit I
GWE2_RBX1_39_32_gwe2_scaffold_293_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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5372..6739
DNA (1368bp) protein (456aa)
3-isopropylmalate dehydratase (EC:4.2.1.33); K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] Tax=GWF2_RBX1_38_17_curated
3-isopropylmalate dehydratase (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit id=1963378 bin=GWD2_RBX1-related_39_127 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWE2_RBX1_39_32_gwe2_scaffold_293_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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6742..7251
DNA (510bp) protein (170aa)
3-isopropylmalate dehydratase small subunit; K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] Tax=GWF2_RBX1_38_17_curated
3-isopropylmalate dehydratase small subunit id=1945449 bin=GWE2_RBX1_39_32 species=Candidatus Desulforudis audaxviator genus=Candidatus Desulforudis taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
3-isopropylmalate dehydratase small subunit
GWE2_RBX1_39_32_gwe2_scaffold_293_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(7261..8523)
DNA (1263bp) protein (421aa)
Metalloendopeptidase-like membrane protein id=1963372 bin=GWD2_RBX1-related_39_127 species=unknown genus=Thermoanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
peptidase M23 Tax=GWF2_RBX1_38_17_curated
peptidase M23
GWE2_RBX1_39_32_gwe2_scaffold_293_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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8831..9778
DNA (948bp) protein (316aa)
Putative glycosyltransferase id=1945453 bin=GWE2_RBX1_39_32 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
putative glycosyltransferase Tax=GWF2_RBX1_38_17_curated
putative glycosyltransferase
GWE2_RBX1_39_32_gwe2_scaffold_293_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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9775..10995
DNA (1221bp) protein (407aa)
id=1945455 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=4442837 Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_293_10
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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11025..12458
DNA (1434bp) protein (478aa)
Cobalamin B12-binding:Radical SAM id=1945456 bin=GWE2_RBX1_39_32 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
methyltransferase Tax=GWF2_RBX1_38_17_curated
methyltransferase
GWE2_RBX1_39_32_gwe2_scaffold_293_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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12553..13482
DNA (930bp) protein (310aa)
Membrane protein, putative id=1945458 bin=GWE2_RBX1_39_32 species=Dictyoglomus thermophilum genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWE2_RBX1_39_32_gwe2_scaffold_293_12
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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13466..14074
DNA (609bp) protein (203aa)
Methylase involved in ubiquinone/menaquinone biosynthesis id=1945460 bin=GWE2_RBX1_39_32 species=Opitutaceae bacterium TAV1 genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
methyltransferase type 11 Tax=GWF2_RBX1_38_17_curated
SAM-dependent methyltransferase
GWE2_RBX1_39_32_gwe2_scaffold_293_13
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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14071..15615
DNA (1545bp) protein (515aa)
Putative uncharacterized protein id=1945462 bin=GWE2_RBX1_39_32 species=Geobacter sp. M18 genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWE2_RBX1_39_32_gwe2_scaffold_293_14
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

15681..17237
DNA (1557bp) protein (519aa)
Putative uncharacterized protein id=1945464 bin=GWE2_RBX1_39_32 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWE2_RBX1_39_32_gwe2_scaffold_293_15
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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17255..18016
DNA (762bp) protein (254aa)
Putative uncharacterized protein id=1945466 bin=GWE2_RBX1_39_32 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
type 11 methyltransferase
GWE2_RBX1_39_32_gwe2_scaffold_293_16
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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18017..18721
DNA (705bp) protein (235aa)
glycosyltransferase; K00729 dolichyl-phosphate beta-glucosyltransferase [EC:2.4.1.117] Tax=GWF2_RBX1_38_17_curated
UDP-glucose--undecaprenyl-phosphate glucosyltransferase id=1945468 bin=GWE2_RBX1_39_32 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
UDP-glucose--undecaprenyl-phosphate glucosyltransferase
GWE2_RBX1_39_32_gwe2_scaffold_293_17
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

18819..19748
DNA (930bp) protein (310aa)
Flp pilus assembly protein CpaB id=1945470 bin=GWE2_RBX1_39_32 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Flp pilus assembly protein CpaB; K02279 pilus assembly protein CpaB Tax=GWF2_RBX1_38_17_curated
Flp pilus assembly protein CpaB
GWE2_RBX1_39_32_gwe2_scaffold_293_18
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

19771..21843
DNA (2073bp) protein (691aa)
Type II and III secretion system protein id=1945472 bin=GWE2_RBX1_39_32 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
type II and III secretion system protein; K02280 pilus assembly protein CpaC Tax=GWF2_RBX1_38_17_curated
type II and III secretion system protein
GWE2_RBX1_39_32_gwe2_scaffold_293_19
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

21945..23135
DNA (1191bp) protein (397aa)
response regulator receiver protein id=1945474 bin=GWE2_RBX1_39_32 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
response regulator receiver protein; K02282 pilus assembly protein CpaE Tax=GWF2_RBX1_38_17_curated
response regulator receiver protein
GWE2_RBX1_39_32_gwe2_scaffold_293_20
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

23149..24783
DNA (1635bp) protein (545aa)
Type II secretion system protein E id=1945476 bin=GWE2_RBX1_39_32 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
type II secretion system protein E; K02283 pilus assembly protein CpaF Tax=GWF2_RBX1_38_17_curated
type II secretion system protein E
GWE2_RBX1_39_32_gwe2_scaffold_293_21
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

24801..25766
DNA (966bp) protein (322aa)
Type II secretion system F domain protein id=1945512 bin=GWE2_RBX1_39_32 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
type II secretion system F domain protein; K12510 tight adherence protein B Tax=GWF2_RBX1_38_17_curated
type II secretion system F domain protein
GWE2_RBX1_39_32_gwe2_scaffold_293_22
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

25789..26718
DNA (930bp) protein (310aa)
Type II secretion system F domain protein id=1945513 bin=GWE2_RBX1_39_32 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
type II secretion system F domain-containing protein; K12511 tight adherence protein C Tax=GWF2_RBX1_38_17_curated
type II secretion system F domain-containing protein
GWE2_RBX1_39_32_gwe2_scaffold_293_23
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

26749..27852
DNA (1104bp) protein (368aa)
id=1945515 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1945515 Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_293_24
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

27899..28411
DNA (513bp) protein (171aa)
HAD superfamily (Subfamily IIIA) phosphatase, TIGR01668 id=1945517 bin=GWE2_RBX1_39_32 species=Clostridium cellulolyticum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
HAD superfamily phosphatase; K07015 Tax=GWF2_RBX1_38_17_curated
HAD superfamily phosphatase
GWE2_RBX1_39_32_gwe2_scaffold_293_25
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

28414..28890
DNA (477bp) protein (159aa)
id=1945519 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1945519 Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_293_26
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

29146..31209
DNA (2064bp) protein (688aa)
Methyl-accepting chemotaxis sensory transducer id=1945520 bin=GWE2_RBX1_39_32 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
methyl-accepting chemotaxis sensory transducer Tax=GWF2_RBX1_38_17_curated
methyl-accepting chemotaxis sensory transducer
GWE2_RBX1_39_32_gwe2_scaffold_293_27
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

31596..32852
DNA (1257bp) protein (419aa)
adenylosuccinate synthetase (EC:6.3.4.4); K01939 adenylosuccinate synthase [EC:6.3.4.4] Tax=GWF2_RBX1_38_17_curated
adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase id=1963309 bin=GWD2_RBX1-related_39_127 species=Bifidobacterium animalis genus=Bifidobacterium taxon_order=Bifidobacteriales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWE2_RBX1_39_32_gwe2_scaffold_293_trna_1
unknown

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32939..33011
DNA (73bp)
transferRNA
GWE2_RBX1_39_32_gwe2_scaffold_293_28
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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33254..34027
DNA (774bp) protein (258aa)
SPFH domain, Band 7 family protein id=1783068 bin=GWD2_RBX1-related_39_127 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
spfh domain, band 7 family protein Tax=GWF2_RBX1_38_17_curated
spfh domain, band 7 family protein
GWE2_RBX1_39_32_gwe2_scaffold_293_29
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

34404..35783
DNA (1380bp) protein (460aa)
MATE efflux family protein id=1945526 bin=GWE2_RBX1_39_32 species=Alkaliphilus oremlandii genus=Alkaliphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
MATE efflux family protein Tax=GWF2_RBX1_38_17_curated
MATE efflux family protein
Displaying items 1-30 of 50 in total

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