ggKbase home page

GWE2_RBX1_39_32_gwe2_scaffold_701

Search features with annotation key words

Displaying 27 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWE2_RBX1_39_32_gwe2_scaffold_701_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

1..447
DNA (447bp) protein (149aa)
Histidine kinase id=2145069 bin=GWE2_RBX1_39_32 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
sensor histidine kinase Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWE2_RBX1_39_32_gwe2_scaffold_701_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

478..573
DNA (96bp) protein (32aa)
id=2145071 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2145071 Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_701_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

1039..1470
DNA (432bp) protein (144aa)
Restriction endonuclease S subunit id=2145073 bin=GWE2_RBX1_39_32 species=Ornithobacterium rhinotracheale genus=Ornithobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Restriction endonuclease S subunit Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_701_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

1467..1799
DNA (333bp) protein (111aa)
Putative uncharacterized protein id=2145076 bin=GWE2_RBX1_39_32 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWE2_RBX1_39_32_gwe2_scaffold_701_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

1985..2515
DNA (531bp) protein (177aa)
id=2145078 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=24609026 Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_701_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(2577..5147)
DNA (2571bp) protein (857aa)
Chaperone protein clpB id=2145079 bin=GWE2_RBX1_39_32 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
ATP-dependent chaperone clpb; K03695 ATP-dependent Clp protease ATP-binding subunit ClpB Tax=GWF2_RBX1_38_17_curated
ATP-dependent chaperone clpb
GWE2_RBX1_39_32_gwe2_scaffold_701_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

5447..6319
DNA (873bp) protein (291aa)
id=2145082 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2145082 Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_701_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(6789..7880)
DNA (1092bp) protein (364aa)
Uncharacterized protein id=2145083 bin=GWE2_RBX1_39_32 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWE2_RBX1_39_32_gwe2_scaffold_701_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(7819..9708)
DNA (1890bp) protein (630aa)
type IIs modification methyltransferase; K06223 DNA adenine methylase [EC:2.1.1.72] Tax=GWF2_RBX1_38_17_curated
dpnM; modification methylase DpnIIA (EC:2.1.1.72)
Type IIs modification methyltransferase id=2145140 bin=GWE2_RBX1_39_32 species=unknown genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWE2_RBX1_39_32_gwe2_scaffold_701_10
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

10443..13205
DNA (2763bp) protein (921aa)
isoleucyl-tRNA synthetase; K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] Tax=GWF2_RBX1_38_17_curated
Isoleucine--tRNA ligase id=2145144 bin=GWE2_RBX1_39_32 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
isoleucyl-tRNA synthetase
GWE2_RBX1_39_32_gwe2_scaffold_701_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

13268..14185
DNA (918bp) protein (306aa)
PfkB domain protein id=2145147 bin=GWE2_RBX1_39_32 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
PfkB domain-containing protein Tax=GWF2_RBX1_38_17_curated
ribokinase-like protein
GWE2_RBX1_39_32_gwe2_scaffold_701_12
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

14298..15698
DNA (1401bp) protein (467aa)
adenosylhomocysteinase; K01251 adenosylhomocysteinase [EC:3.3.1.1] Tax=GWF2_RBX1_38_17_curated
adenosylhomocysteinase (EC:3.3.1.1)
Adenosylhomocysteinase id=2145150 bin=GWE2_RBX1_39_32 species=Denitrovibrio acetiphilus genus=Denitrovibrio taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWE2_RBX1_39_32_gwe2_scaffold_701_13
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

15728..16291
DNA (564bp) protein (188aa)
biotin--acetyl-CoA-carboxylase ligase (EC:6.3.4.15); K03524 BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] Tax=GWF2_RBX1_38_17_cu
biotin--acetyl-CoA-carboxylase ligase (EC:6.3.4.15)
Biotin--acetyl-CoA-carboxylase ligase id=2145153 bin=GWE2_RBX1_39_32 species=Alkaliphilus oremlandii genus=Alkaliphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWE2_RBX1_39_32_gwe2_scaffold_701_14
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

16342..16710
DNA (369bp) protein (123aa)
chorismate mutase; K06208 chorismate mutase [EC:5.4.99.5] Tax=GWF2_RBX1_38_17_curated
Chorismate mutase id=1994039 bin=GWD2_RBX1-related_39_127 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
chorismate mutase
GWE2_RBX1_39_32_gwe2_scaffold_701_15
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

16737..17606
DNA (870bp) protein (290aa)
prephenate dehydrogenase; K04517 prephenate dehydrogenase [EC:1.3.1.12] Tax=GWF2_RBX1_38_17_curated
Prephenate dehydrogenase id=1994044 bin=GWD2_RBX1-related_39_127 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
prephenate dehydrogenase
GWE2_RBX1_39_32_gwe2_scaffold_701_16
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

17643..17861
DNA (219bp) protein (73aa)
id=2145159 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2145159 Tax=GWF2_RBX1_38_17_curated
GWE2_RBX1_39_32_gwe2_scaffold_701_17
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

17880..18527
DNA (648bp) protein (216aa)
Uncharacterized protein id=2145160 bin=GWE2_RBX1_39_32 species=Tepidanaerobacter acetatoxydans genus=Tepidanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
metV; 5,10-methylene-tetrahydrofolate reductase subunit MetV
GWE2_RBX1_39_32_gwe2_scaffold_701_18
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

18554..19438
DNA (885bp) protein (295aa)
Methylenetetrahydrofolate reductase id=2145162 bin=GWE2_RBX1_39_32 species=Methanomethylovorans hollandica genus=Methanomethylovorans taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
5,10-methylenetetrahydrofolate reductase Tax=GWF2_RBX1_38_17_curated
5,10-methylenetetrahydrofolate reductase
GWE2_RBX1_39_32_gwe2_scaffold_701_19
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists


19499..19873
DNA (375bp) protein (125aa)
50S ribosomal protein L21 id=3964772 bin=GWF2_OP9-related_38_17 species=Oribacterium sp. oral taxon 078 genus=Oribacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
LSU ribosomal protein L21P Tax=GWF2_RBX1_38_17_curated
50S ribosomal protein L21
GWE2_RBX1_39_32_gwe2_scaffold_701_20
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists


19946..20200
DNA (255bp) protein (85aa)
50S ribosomal protein L27 id=1994061 bin=GWD2_RBX1-related_39_127 species=unknown genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
rpmA; 50S ribosomal protein L27; K02899 large subunit ribosomal protein L27 Tax=GWF2_RBX1_38_17_curated
50S ribosomal protein L27
GWE2_RBX1_39_32_gwe2_scaffold_701_21
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

20278..21318
DNA (1041bp) protein (347aa)
GTPase obg id=1994066 bin=GWD2_RBX1-related_39_127 species=Aquifex aeolicus genus=Aquifex taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GTP1/OBG sub domain-containing protein; K03979 GTP-binding protein Tax=GWF2_RBX1_38_17_curated
GTP1/OBG sub domain-containing protein
GWE2_RBX1_39_32_gwe2_scaffold_701_22
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

21362..22135
DNA (774bp) protein (258aa)
glutamate 5-kinase (EC:2.7.2.11); K00931 glutamate 5-kinase [EC:2.7.2.11] Tax=GWF2_RBX1_38_17_curated
glutamate 5-kinase (EC:2.7.2.11)
Glutamate 5-kinase id=2145167 bin=GWE2_RBX1_39_32 species=Clostridium carboxidivorans genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWE2_RBX1_39_32_gwe2_scaffold_701_23
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

22149..23396
DNA (1248bp) protein (416aa)
Gamma-glutamyl phosphate reductase id=1994074 bin=GWD2_RBX1-related_39_127 species=Desulfotomaculum gibsoniae genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
gamma-glutamyl phosphate reductase Tax=GWF2_RBX1_38_17_curated
gamma-glutamyl phosphate reductase
GWE2_RBX1_39_32_gwe2_scaffold_701_24
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

23531..24529
DNA (999bp) protein (333aa)
UDP-glucose-4-epimerase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] Tax=GWF2_RBX1_38_17_curated
UDP-glucose-4-epimerase id=2145172 bin=GWE2_RBX1_39_32 species=Clostridium clariflavum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
UDP-glucose-4-epimerase
GWE2_RBX1_39_32_gwe2_scaffold_701_25
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

24519..25583
DNA (1065bp) protein (355aa)
mannose-1-phosphate guanylyltransferase (EC:2.7.7.22 5.3.1.8); K00971 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] Tax=GWF2_RBX1_38_17_curated
mannose-1-phosphate guanylyltransferase (EC:2.7.7.22 5.3.1.8)
Mannose-1-phosphate guanylyltransferase (GDP); mannose-6-phosphate isomerase, type 2 id=2145174 bin=GWE2_RBX1_39_32 species=Mahella australiensis genus=Mahella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWE2_RBX1_39_32_gwe2_scaffold_701_26
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(25671..26942)
DNA (1272bp) protein (424aa)
ABC-type branched-E47chain amino acid transporter, periplasmic binding protein id=2145176 bin=GWE2_RBX1_39_32 species=Desulfobacula toluolica genus=Desulfobacula taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
branched-chain amino acid ABC transporter periplasmic protein Tax=GWF2_RBX1_38_17_curated
branched-chain amino acid ABC transporter substrate-binding protein
GWE2_RBX1_39_32_gwe2_scaffold_701_27
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(27026..29206)
DNA (2181bp) protein (727aa)
Methyl-accepting chemotaxis protein id=2145180 bin=GWE2_RBX1_39_32 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
methyl-accepting chemotaxis protein Tax=GWF2_RBX1_38_17_curated
methyl-accepting chemotaxis protein
Displaying 27 items

View Taxonomy