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GWF1_Burkholderiales_GWF1_66_17_gwf1_scaffold_90

Search features with annotation key words

Displaying items 1-30 of 238 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF1_Burkholderiales_GWF1_66_17_gwf1_scaffold_90_1
Burkholderia vietnamiensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..90)
DNA (90bp) protein (30aa)
Elongation Factor Tu (Fragment) n=1 Tax=Taylorella asinigenitalis 14/45 RepID=I7IBW3_9BURK
elongation factor Tu
Elongation factor Tu {ECO:0000255|HAMAP-Rule:MF_00118}; Short=EF-Tu {ECO:0000255|HAMAP-Rule:MF_00118};; TaxID=269482 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderi
GWF1_Burkholderiales_GWF1_66_17_gwf1_scaffold_90_trna_3
unknown

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comp(138..209)
DNA (72bp)
transferRNA
GWF1_Burkholderiales_GWF1_66_17_gwf1_scaffold_90_trna_2
unknown

Not on your lists

comp(275..345)
DNA (71bp)
transferRNA
GWF1_Burkholderiales_GWF1_66_17_gwf1_scaffold_90_trna_1
unknown

Not on your lists

comp(431..513)
DNA (83bp)
transferRNA
GWF1_Burkholderiales_GWF1_66_17_gwf1_scaffold_90_2
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(571..1317)
DNA (747bp) protein (249aa)
uracil-DNA glycosylase; K03648 uracil-DNA glycosylase [EC:3.2.2.27] Tax=GWE1_Burkholderiales_65_30_curated
Uracil-DNA glycosylase id=1274451 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
uracil-DNA glycosylase
GWF1_Burkholderiales_GWF1_66_17_gwf1_scaffold_90_3
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1328..2128)
DNA (801bp) protein (267aa)
indole-3-glycerol-phosphate synthase (EC:4.1.1.48); K01609 indole-3-glycerol phosphate synthase [EC:4.1.1.48] id=5082775 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
trpC; indole-3-glycerol phosphate synthase TrpC (EC:4.1.1.48) Tax=GWE1_Burkholderiales_65_30_curated
trpC; indole-3-glycerol phosphate synthase TrpC (EC:4.1.1.48)
GWF1_Burkholderiales_GWF1_66_17_gwf1_scaffold_90_4
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2121..2270)
DNA (150bp) protein (50aa)
id=5082776 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax ebreus genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
id=5082776 Tax=GWE1_Burkholderiales_65_30_curated
GWF1_Burkholderiales_GWF1_66_17_gwf1_scaffold_90_5
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2279..3346)
DNA (1068bp) protein (356aa)
trpD; anthranilate phosphoribosyltransferase (EC:2.4.2.18); K00766 anthranilate phosphoribosyltransferase [EC:2.4.2.18] id=5082777 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
trpD; anthranilate phosphoribosyltransferase (EC:2.4.2.18); K00766 anthranilate phosphoribosyltransferase [EC:2.4.2.18] Tax=GWE1_Burkholderiales_65_30_curated
trpD; anthranilate phosphoribosyltransferase (EC:2.4.2.18)
GWF1_Burkholderiales_GWF1_66_17_gwf1_scaffold_90_6
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3362..4012)
DNA (651bp) protein (217aa)
Threonine efflux protein id=1274455 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
lysine exporter protein LysE/YggA Tax=GWE1_Burkholderiales_65_30_curated
lysine exporter protein LysE/YggA
GWF1_Burkholderiales_GWF1_66_17_gwf1_scaffold_90_7
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4033..5106)
DNA (1074bp) protein (358aa)
ltaE; low-specificity L-threonine aldolase; K01620 threonine aldolase [EC:4.1.2.5] id=5082779 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
ltaE; low-specificity L-threonine aldolase; K01620 threonine aldolase [EC:4.1.2.5] Tax=GWE1_Burkholderiales_65_30_curated
ltaE; low-specificity L-threonine aldolase
GWF1_Burkholderiales_GWF1_66_17_gwf1_scaffold_90_8
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5103..5699)
DNA (597bp) protein (199aa)
anthranilate synthase component II; K01658 anthranilate synthase component II [EC:4.1.3.27] id=5082780 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
anthranilate synthase component II; K01658 anthranilate synthase component II [EC:4.1.3.27] Tax=GWE1_Burkholderiales_65_30_curated
anthranilate synthase component II
GWF1_Burkholderiales_GWF1_66_17_gwf1_scaffold_90_9
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5705..7294)
DNA (1590bp) protein (530aa)
anthranilate synthase component I (EC:4.1.3.27); K01657 anthranilate synthase component I [EC:4.1.3.27] Tax=GWE1_Burkholderiales_65_30_curated
anthranilate synthase component I (EC:4.1.3.27)
Anthranilate synthase, component I id=1274458 bin=GWE1_Burkholderiales_65_30 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
GWF1_Burkholderiales_GWF1_66_17_gwf1_scaffold_90_10
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7718..8329
DNA (612bp) protein (204aa)
hypothetical protein id=5082782 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
GWF1_Burkholderiales_GWF1_66_17_gwf1_scaffold_90_11
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8567..9163
DNA (597bp) protein (199aa)
hypothetical protein id=5082783 bin=GWF1_Burkholderiales_GWF1_66_17 species=Curvibacter putative symbiont of Hydra magnipapillata genus=Curvibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
putative lipoprotein transmembrane Tax=GWE1_Burkholderiales_65_30_curated
putative lipoprotein transmembrane
GWF1_Burkholderiales_GWF1_66_17_gwf1_scaffold_90_12
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9209..9793
DNA (585bp) protein (195aa)
lipoprotein transmembrane id=5082784 bin=GWF1_Burkholderiales_GWF1_66_17 species=Variovorax sp. CF313 genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
lipoprotein transmembrane Tax=GWE1_Burkholderiales_65_30_curated
membrane protein
GWF1_Burkholderiales_GWF1_66_17_gwf1_scaffold_90_13
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9812..10507)
DNA (696bp) protein (232aa)
phosphoglycolate phosphatase (EC:3.1.3.18); K01091 phosphoglycolate phosphatase [EC:3.1.3.18] id=5082785 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Delftia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
phosphoglycolate phosphatase (EC:3.1.3.18); K01091 phosphoglycolate phosphatase [EC:3.1.3.18] Tax=GWE1_Burkholderiales_65_30_curated
phosphoglycolate phosphatase (EC:3.1.3.18)
GWF1_Burkholderiales_GWF1_66_17_gwf1_scaffold_90_14
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10579..11256)
DNA (678bp) protein (226aa)
ribulose-phosphate 3-epimerase (EC:5.1.3.1); K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1] id=5082786 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
ribulose-phosphate 3-epimerase (EC:5.1.3.1); K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1] Tax=GWE1_Burkholderiales_65_30_curated
pentose-5-phosphate-3-epimerase
GWF1_Burkholderiales_GWF1_66_17_gwf1_scaffold_90_15
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11333..11743
DNA (411bp) protein (137aa)
apaG; ApaG protein; K06195 ApaG protein id=5082787 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
apaG; ApaG protein; K06195 ApaG protein Tax=GWE1_Burkholderiales_65_30_curated
apaG; ApaG protein
GWF1_Burkholderiales_GWF1_66_17_gwf1_scaffold_90_16
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11793..14018
DNA (2226bp) protein (742aa)
Site-specific recombinase Gcr id=1274465 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
site-specific recombinase Gcr Tax=GWE1_Burkholderiales_65_30_curated
site-specific recombinase Gcr
GWF1_Burkholderiales_GWF1_66_17_gwf1_scaffold_90_17
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14015..15025
DNA (1011bp) protein (337aa)
thiamine-monophosphate kinase (EC:2.7.4.16); K00946 thiamine-monophosphate kinase [EC:2.7.4.16] id=5082789 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
thiamine-monophosphate kinase (EC:2.7.4.16); K00946 thiamine-monophosphate kinase [EC:2.7.4.16] Tax=GWE1_Burkholderiales_65_30_curated
thiamine-monophosphate kinase (EC:2.7.4.16)
GWF1_Burkholderiales_GWF1_66_17_gwf1_scaffold_90_18
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15071..15628
DNA (558bp) protein (186aa)
phosphatidylglycerophosphatase (EC:3.1.3.27); K01095 phosphatidylglycerophosphatase A [EC:3.1.3.27] id=5082790 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
phosphatidylglycerophosphatase A; K01095 phosphatidylglycerophosphatase A [EC:3.1.3.27] Tax=GWE1_Burkholderiales_65_30_curated
phosphatidylglycerophosphatase A
GWF1_Burkholderiales_GWF1_66_17_gwf1_scaffold_90_19
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15677..16162
DNA (486bp) protein (162aa)
CinA domain-containing protein; K03743 id=5082791 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
CinA domain-containing protein; K03743 Tax=GWE1_Burkholderiales_65_30_curated
CinA domain-containing protein
GWF1_Burkholderiales_GWF1_66_17_gwf1_scaffold_90_20
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16274..17437)
DNA (1164bp) protein (388aa)
twiN-arginine translocation pathway signal sequence domain-containing protein id=5082792 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
twiN-arginine translocation pathway signal sequence domain-containing protein Tax=GWE1_Burkholderiales_65_30_curated
twiN-arginine translocation pathway signal sequence domain-containing protein
GWF1_Burkholderiales_GWF1_66_17_gwf1_scaffold_90_21
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17556..18443
DNA (888bp) protein (296aa)
LysR family transcriptional regulator id=5082793 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
LysR family transcriptional regulator Tax=GWE1_Burkholderiales_65_30_curated
LysR family transcriptional regulator
GWF1_Burkholderiales_GWF1_66_17_gwf1_scaffold_90_22
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18455..19600
DNA (1146bp) protein (382aa)
hypothetical protein id=5082794 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
GWF1_Burkholderiales_GWF1_66_17_gwf1_scaffold_90_23
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19807..20274
DNA (468bp) protein (156aa)
id=5082795 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
id=5082795 Tax=GWE1_Burkholderiales_65_30_curated
GWF1_Burkholderiales_GWF1_66_17_gwf1_scaffold_90_24
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20305..21111)
DNA (807bp) protein (269aa)
YecA; K07039 uncharacterized protein id=5082796 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
sec-c motif domain-containing protein Tax=GWE1_Burkholderiales_65_30_curated
sec-c motif domain-containing protein
GWF1_Burkholderiales_GWF1_66_17_gwf1_scaffold_90_25
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21215..21307)
DNA (93bp) protein (31aa)
id=5082797 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
id=5082797 Tax=GWE1_Burkholderiales_65_30_curated
GWF1_Burkholderiales_GWF1_66_17_gwf1_scaffold_90_26
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21304..21555)
DNA (252bp) protein (84aa)
hypothetical protein; K01561 haloacetate dehalogenase [EC:3.8.1.3] id=5082798 bin=GWF1_Burkholderiales_GWF1_66_17 species=Nostoc sp. genus=Nostoc taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein; K01561 haloacetate dehalogenase [EC:3.8.1.3] Tax=GWE1_Burkholderiales_65_30_curated
alpha/beta hydrolase
GWF1_Burkholderiales_GWF1_66_17_gwf1_scaffold_90_27
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21675..22529)
DNA (855bp) protein (285aa)
NmrA family protein id=5082799 bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
NmrA family protein Tax=GWE1_Burkholderiales_65_30_curated
NmrA family protein
Displaying items 1-30 of 238 in total

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