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GWF1_Sphingobium_63_6_gwf1_scaffold_10871

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF1_Sphingobium_63_6_gwf1_scaffold_10871_1
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..1452)
DNA (1452bp) protein (484aa)
ATP-dependent helicase HrpB; K03579 ATP-dependent helicase HrpB [EC:3.6.4.13] Tax=GWF1_Sphingomonadales_63_6_curated
ATP-dependent helicase n=1 Tax=Sphingobium xenophagum RepID=UPI00037096CA
ATP-dependent helicase HrpB
GWF1_Sphingobium_63_6_gwf1_scaffold_10871_2
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1490..2269)
DNA (780bp) protein (260aa)
membrane protein n=1 Tax=Sphingobium xenophagum RepID=UPI0002F9059B
putative permease; K07090 Tax=GWF1_Sphingomonadales_63_6_curated
putative permease
GWF1_Sphingobium_63_6_gwf1_scaffold_10871_3
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2406..3278)
DNA (873bp) protein (291aa)
ispB; octaprenyl-diphosphate synthase (EC:2.5.1.- 2.5.1.29); K02523 octaprenyl-diphosphate synthase [EC:2.5.1.90] Tax=GWF1_Sphingomonadales_63_6_curated
ispB; octaprenyl-diphosphate synthase (EC:2.5.1.- 2.5.1.29)
farnesyltranstransferase n=1 Tax=Sphingobium xenophagum RepID=UPI0002D6DF8B
GWF1_Sphingobium_63_6_gwf1_scaffold_10871_4
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3537..3815
DNA (279bp) protein (93aa)
chorismate mutase; K04092 chorismate mutase [EC:5.4.99.5] Tax=GWF1_Sphingomonadales_63_6_curated
chorismate mutase n=1 Tax=Sphingobium xenophagum RepID=UPI0002FC6679
chorismate mutase
GWF1_Sphingobium_63_6_gwf1_scaffold_10871_5
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3831..4769)
DNA (939bp) protein (313aa)
JmjC n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262B7DE
JmjC {ECO:0000313|EMBL:EXS68618.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. Ant17.;"
hypothetical protein
GWF1_Sphingobium_63_6_gwf1_scaffold_10871_6
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4819..5721)
DNA (903bp) protein (301aa)
Permease of the drug/metabolite transporter (DMT) superfamily n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MLU0_9SPHN
hypothetical protein Tax=GWF1_Sphingomonadales_63_6_curated
hypothetical protein
GWF1_Sphingobium_63_6_gwf1_scaffold_10871_7
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5765..6181)
DNA (417bp) protein (139aa)
cytochrome C biogenesis protein CcmB n=1 Tax=Sphingobium xenophagum RepID=UPI0003602131
cytochrome c-type biogenesis protein CcmB; K02194 heme exporter protein B Tax=GWF1_Sphingomonadales_63_6_curated
cytochrome c-type biogenesis protein CcmB
GWF1_Sphingobium_63_6_gwf1_scaffold_10871_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6519..7076)
DNA (558bp) protein (186aa)
Two component Transcriptional regulator, Winged helix family id=1334567 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
two component transcriptional regulator; K02483 two-component system, OmpR family, response regulator Tax=GWE1_Thiobacillus_62_9_curated
two component transcriptional regulator
Displaying 8 items

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