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GWF1_Sphingobium_63_6_gwf1_scaffold_4511

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF1_Sphingobium_63_6_gwf1_scaffold_4511_1
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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71..823
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Sphingobium sp. AP49 RepID=J2LDX5_9SPHN
hypothetical protein Tax=GWF1_Sphingomonadales_63_6_curated
hypothetical protein
GWF1_Sphingobium_63_6_gwf1_scaffold_4511_2
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(925..4062)
DNA (3138bp) protein (1046aa)
putative type I restriction-modification system HsdR; K01153 type I restriction enzyme, R subunit [EC:3.1.21.3] Tax=GWF1_Sphingomonadales_63_6_curated
Putative type I restriction-modification system HsdR n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IGI7_9SPHN
putative type I restriction-modification system HsdR
GWF1_Sphingobium_63_6_gwf1_scaffold_4511_3
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4211..5836)
DNA (1626bp) protein (542aa)
Putative type I restriction-modification system specificity subunit n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IGI5_9SPHN
restriction modification system DNA specificity subunit Tax=GWF1_Sphingomonadales_63_6_curated
restriction modification system DNA specificity subunit
GWF1_Sphingobium_63_6_gwf1_scaffold_4511_4
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6202..7800)
DNA (1599bp) protein (533aa)
putative type I restriction enzyme (EC:2.1.1.72); K03427 type I restriction enzyme M protein [EC:2.1.1.72] Tax=GWF1_Sphingomonadales_63_6_curated
putative type I restriction enzyme (EC:2.1.1.72)
Putative type I restriction enzyme n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IGI4_9SPHN
GWF1_Sphingobium_63_6_gwf1_scaffold_4511_trna_1
unknown

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comp(8156..8229)
DNA (74bp)
transferRNA
GWF1_Sphingobium_63_6_gwf1_scaffold_4511_5
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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9300..10691
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Sphingobium indicum B90A RepID=I5B9N2_9SPHN
hypothetical protein Tax=GWF1_Sphingomonadales_63_6_curated
hypothetical protein
GWF1_Sphingobium_63_6_gwf1_scaffold_4511_6
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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10813..11745
DNA (933bp) protein (311aa)
Protein containing domains DUF403 n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MNG4_9SPHN
hypothetical protein Tax=GWF1_Sphingomonadales_63_6_curated
hypothetical protein rbh
GWF1_Sphingobium_63_6_gwf1_scaffold_4511_7
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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11768..12640
DNA (873bp) protein (291aa)
Protein containing transglutaminase-like domain,putative cysteine protease n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MNX0_9SPHN
transglutaminase Tax=GWF1_Sphingomonadales_63_6_curated
transglutaminase rbh
GWF1_Sphingobium_63_6_gwf1_scaffold_4511_8
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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12668..13405
DNA (738bp) protein (246aa)
peptidase n=1 Tax=Sphingobium xenophagum RepID=UPI0003131674
Peptidase {ECO:0000313|EMBL:EXS69252.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. Ant17.;"
20S proteasome subunits A and B
GWF1_Sphingobium_63_6_gwf1_scaffold_4511_9
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13285..13572)
DNA (288bp) protein (96aa)
Tax=GWF1_Sphingomonadales_63_6_curated
GWF1_Sphingobium_63_6_gwf1_scaffold_4511_10
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13662..14192
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Sphingobium sp. AP49 RepID=J2WQR5_9SPHN
hypothetical protein Tax=GWF1_Sphingomonadales_63_6_curated
hypothetical protein
Displaying 11 items

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