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GWF1_Sphingobium_63_6_gwf1_scaffold_1925

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF1_Sphingobium_63_6_gwf1_scaffold_1925_1
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..758
DNA (756bp) protein (252aa)
Acetyl-coenzyme A synthetase {ECO:0000256|HAMAP-Rule:MF_01123}; Short=AcCoA synthetase {ECO:0000256|HAMAP-Rule:MF_01123};; Short=Acs {ECO:0000256|HAMAP-Rule:MF_01123};; EC=6.2.1.1 {ECO:0000256|HAMAP-R
acetyl-CoA synthetase (EC:6.2.1.1)
Acetyl-coenzyme A synthetase n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9CBH5_9SPHN
GWF1_Sphingobium_63_6_gwf1_scaffold_1925_2
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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907..1476
DNA (570bp) protein (190aa)
LuxR family two component transcriptional regulator n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WLQ3_9SPHN
LuxR family transcriptional regulator {ECO:0000313|EMBL:EXS71778.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="S
two component LuxR family transcriptional regulator
GWF1_Sphingobium_63_6_gwf1_scaffold_1925_3
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1462..4821)
DNA (3360bp) protein (1120aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9CCU2_9SPHN
multi-sensor hybrid histidine kinase Tax=GWF1_Sphingomonadales_63_6_curated
multi-sensor hybrid histidine kinase
GWF1_Sphingobium_63_6_gwf1_scaffold_1925_4
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5422..5994)
DNA (573bp) protein (191aa)
Tax=GWF1_Sphingomonadales_63_6_curated
GWF1_Sphingobium_63_6_gwf1_scaffold_1925_5
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6217..6888
DNA (672bp) protein (224aa)
histidine kinase n=2 Tax=Sphingobium xenophagum RepID=UPI000367F2D2
putative signal transduction protein Tax=GWF1_Sphingomonadales_63_6_curated
putative signal transduction protein
GWF1_Sphingobium_63_6_gwf1_scaffold_1925_6
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6900..7844)
DNA (945bp) protein (315aa)
UPI0003D66F40 related cluster n=1 Tax=unknown RepID=UPI0003D66F40
enoyl-CoA hydratase/isomerase; K13816 DSF synthase Tax=GWF1_Sphingomonadales_63_6_curated
enoyl-CoA hydratase/isomerase
GWF1_Sphingobium_63_6_gwf1_scaffold_1925_7
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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8292..9422
DNA (1131bp) protein (377aa)
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29); K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29] Tax=GWF1_Sphingomonadales_63_6_curated
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29)
queuine tRNA-ribosyltransferase n=1 Tax=Sphingobium xenophagum RepID=UPI0003057F7D
GWF1_Sphingobium_63_6_gwf1_scaffold_1925_8
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9426..11018)
DNA (1593bp) protein (531aa)
UPI0003D5BB0C related cluster n=1 Tax=unknown RepID=UPI0003D5BB0C
putative signal transduction histidine kinase Tax=GWF1_Sphingomonadales_63_6_curated
putative signal transduction histidine kinase
GWF1_Sphingobium_63_6_gwf1_scaffold_1925_9
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11026..11259)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N7K0_9SPHN
hypothetical protein Tax=GWF1_Sphingomonadales_63_6_curated
hypothetical protein
GWF1_Sphingobium_63_6_gwf1_scaffold_1925_10
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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11540..12331
DNA (792bp) protein (264aa)
DNA-directed RNA polymerase specialized sigma subunit, sigma24-like n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MWX4_9SPHN
Phyllosphere-induced regulator PhyR {ECO:0000313|EMBL:EXS71771.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sph
CheY-like response regulator
GWF1_Sphingobium_63_6_gwf1_scaffold_1925_11
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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12411..12542
DNA (132bp) protein (44aa)
Regulator {ECO:0000313|EMBL:EXS71770.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. Ant17.;"
GWF1_Sphingobium_63_6_gwf1_scaffold_1925_12
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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12603..13298
DNA (696bp) protein (232aa)
UPI0003D5E9D4 related cluster n=1 Tax=unknown RepID=UPI0003D5E9D4
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWF1_Sphingomonadales_63_6_curated
ECF subfamily RNA polymerase sigma-24 subunit
GWF1_Sphingobium_63_6_gwf1_scaffold_1925_13
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13353..13601
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MS82_9SPHN
Uncharacterized protein Tax=GWF1_Sphingomonadales_63_6_curated
GWF1_Sphingobium_63_6_gwf1_scaffold_1925_14
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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13731..15146
DNA (1416bp) protein (472aa)
FIG071646: Sugar transferase n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MXR4_9SPHN
putative sugar transferase Tax=GWF1_Sphingomonadales_63_6_curated
putative sugar transferase
GWF1_Sphingobium_63_6_gwf1_scaffold_1925_15
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(15163..16605)
DNA (1443bp) protein (481aa)
Tax=GWF1_Sphingomonadales_63_6_curated
GWF1_Sphingobium_63_6_gwf1_scaffold_1925_16
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16630..16911)
DNA (282bp) protein (94aa)
Tax=GWF1_Sphingomonadales_63_6_curated
GWF1_Sphingobium_63_6_gwf1_scaffold_1925_17
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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17218..18015
DNA (798bp) protein (266aa)
Response regulatory protein n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MS88_9SPHN
atoC; two-component system response regulator AtoC; K02481 two-component system, NtrC family, response regulator Tax=GWF1_Sphingomonadales_63_6_curated
atoC; two-component system response regulator AtoC
Displaying 17 items

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