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GWF1_Sphingobium_63_6_gwf1_scaffold_1818

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF1_Sphingobium_63_6_gwf1_scaffold_1818_1
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..115)
DNA (114bp) protein (38aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {EC
DNA ligase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W2Q3_9SPHN
NAD-dependent DNA ligase
GWF1_Sphingobium_63_6_gwf1_scaffold_1818_2
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(421..1137)
DNA (717bp) protein (239aa)
DNA ligase; K01972 DNA ligase (NAD+) [EC:6.5.1.2] Tax=GWF1_Sphingomonadales_63_6_curated
NAD-dependent DNA ligase LigA n=1 Tax=Sphingobium xenophagum RepID=UPI000374F841
DNA ligase
GWF1_Sphingobium_63_6_gwf1_scaffold_1818_3
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1213..1971)
DNA (759bp) protein (253aa)
speE; spermidine synthase (EC:2.5.1.16) Tax=GWF1_Sphingomonadales_63_6_curated
speE; spermidine synthase (EC:2.5.1.16)
spermidine synthase n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B66F06
GWF1_Sphingobium_63_6_gwf1_scaffold_1818_4
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2069..2392)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. AP12 RepID=J3A472_9SPHN
hypothetical protein Tax=GWF1_Sphingomonadales_63_6_curated
hypothetical protein
GWF1_Sphingobium_63_6_gwf1_scaffold_1818_5
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2904..3266
DNA (363bp) protein (121aa)
hypothetical protein Tax=GWF1_Sphingomonadales_63_6_curated
GWF1_Sphingobium_63_6_gwf1_scaffold_1818_6
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3980..4618
DNA (639bp) protein (213aa)
Tax=GWF1_Sphingomonadales_63_6_curated
GWF1_Sphingobium_63_6_gwf1_scaffold_1818_7
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4646..4780)
DNA (135bp) protein (45aa)
Tax=GWF1_Sphingomonadales_63_6_curated
GWF1_Sphingobium_63_6_gwf1_scaffold_1818_8
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4773..4964)
DNA (192bp) protein (64aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI000363E2E4
hypothetical protein Tax=GWF1_Sphingomonadales_63_6_curated
GWF1_Sphingobium_63_6_gwf1_scaffold_1818_9
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5265..6122)
DNA (858bp) protein (286aa)
hypothetical protein Tax=GWF1_Sphingomonadales_63_6_curated
GWF1_Sphingobium_63_6_gwf1_scaffold_1818_10
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6720..8672)
DNA (1953bp) protein (651aa)
TraD n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NH25_9SPHN
hypothetical protein Tax=GWF1_Sphingomonadales_63_6_curated
hypothetical protein
GWF1_Sphingobium_63_6_gwf1_scaffold_1818_11
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8669..9016)
DNA (348bp) protein (116aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6INU6_9SPHN
hypothetical protein Tax=GWF1_Sphingomonadales_63_6_curated
hypothetical protein
GWF1_Sphingobium_63_6_gwf1_scaffold_1818_12
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9806..10201
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9CXX0_SPHYA
hypothetical protein Tax=GWF1_Sphingomonadales_63_6_curated
hypothetical protein
GWF1_Sphingobium_63_6_gwf1_scaffold_1818_13
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10179..11117)
DNA (939bp) protein (313aa)
Putative nucleotidyltransferase n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4YXV4_SPHJU
putative nucleotidyltransferase Tax=GWF1_Sphingomonadales_63_6_curated
putative nucleotidyltransferase
GWF1_Sphingobium_63_6_gwf1_scaffold_1818_14
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11188..11391)
DNA (204bp) protein (68aa)
hypothetical protein Tax=GWF1_Sphingomonadales_63_6_curated
GWF1_Sphingobium_63_6_gwf1_scaffold_1818_15
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11375..12301)
DNA (927bp) protein (309aa)
antirepressor n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI0002889EC9
hypothetical protein Tax=GWF1_Sphingomonadales_63_6_curated
antirepressor
GWF1_Sphingobium_63_6_gwf1_scaffold_1818_16
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12717..14519)
DNA (1803bp) protein (601aa)
chromosome partitioning protein ParB n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262B934
ParB-like protein; K03497 chromosome partitioning protein, ParB family Tax=GWF1_Sphingomonadales_63_6_curated
ParB-like protein
GWF1_Sphingobium_63_6_gwf1_scaffold_1818_17
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14627..15256)
DNA (630bp) protein (210aa)
Tax=GWF1_Sphingomonadales_63_6_curated
GWF1_Sphingobium_63_6_gwf1_scaffold_1818_18
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15198..16259)
DNA (1062bp) protein (354aa)
Uncharacterized protein n=2 Tax=Alphaproteobacteria RepID=F2J6Z6_POLGS
hypothetical protein Tax=GWF1_Sphingomonadales_63_6_curated
hypothetical protein
GWF1_Sphingobium_63_6_gwf1_scaffold_1818_19
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16256..16906)
DNA (651bp) protein (217aa)
Starvation-inducible DNA-binding protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HCR2_9BRAD
hypothetical protein Tax=GWF1_Sphingomonadales_63_6_curated
hypothetical protein
GWF1_Sphingobium_63_6_gwf1_scaffold_1818_20
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17262..18659
DNA (1398bp) protein (466aa)
hsdR1; type I restriction-modification system RcaSBIP subunit R (EC:3.1.21.3); K01153 type I restriction enzyme, R subunit [EC:3.1.21.3] Tax=GWF1_Sphingomonadales_63_6_curated
hsdR1; type I restriction-modification system RcaSBIP subunit R (EC:3.1.21.3)
Type I restriction-modification system RcaSBIP, R subunit n=4 Tax=Rhodobacter capsulatus RepID=D5AQR0_RHOCB
GWF1_Sphingobium_63_6_gwf1_scaffold_1818_21
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18605..20641
DNA (2037bp) protein (679aa)
hsdR1; type I restriction-modification system RcaSBIP subunit R (EC:3.1.21.3); K01153 type I restriction enzyme, R subunit [EC:3.1.21.3] Tax=GWF1_Sphingomonadales_63_6_curated
hsdR1; type I restriction-modification system RcaSBIP subunit R (EC:3.1.21.3)
Type I restriction enzyme EcoKI subunit R n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YKP8_9RHIZ
GWF1_Sphingobium_63_6_gwf1_scaffold_1818_22
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20641..20871
DNA (231bp) protein (77aa)
hsdM1; type I restriction-modification system RcaSBIP subunit M (EC:2.1.1.72); K03427 type I restriction enzyme M protein [EC:2.1.1.72] Tax=GWF1_Sphingomonadales_63_6_curated
hsdM1; type I restriction-modification system RcaSBIP subunit M (EC:2.1.1.72)
Type I restriction-modification system RcaSBIP subunit M n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YKP7_9RHIZ
Displaying 22 items

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