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GWF1_Sphingobium_63_6_gwf1_scaffold_4306

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF1_Sphingobium_63_6_gwf1_scaffold_4306_1
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..179)
DNA (177bp) protein (59aa)
Conjugal transfer protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0HPV0_9SPHN
conjugal transfer protein TrbB; K03198 type IV secretion system protein VirB3 Tax=GWF1_Sphingomonadales_63_6_curated
conjugal transfer protein TrbB
GWF1_Sphingobium_63_6_gwf1_scaffold_4306_2
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(179..511)
DNA (333bp) protein (111aa)
Conjugal transfer protein TrbC n=1 Tax=Sphingobium lactosutens DS20 RepID=T0IQ29_9SPHN
conjugal transfer protein TrbC; K03197 type IV secretion system protein VirB2 Tax=GWF1_Sphingomonadales_63_6_curated
conjugal transfer protein TrbC
GWF1_Sphingobium_63_6_gwf1_scaffold_4306_3
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(511..1476)
DNA (966bp) protein (322aa)
Type II secretion system protein E n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GBK7_NOVAD
type II secretion system protein E; K03196 type IV secretion system protein VirB11 Tax=GWF1_Sphingomonadales_63_6_curated
type II secretion system protein E
GWF1_Sphingobium_63_6_gwf1_scaffold_4306_4
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1669..2367)
DNA (699bp) protein (233aa)
LuxR family transcriptional regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJU1_9SPHN
LuxR family transcriptional regulator Tax=GWF1_Sphingomonadales_63_6_curated
LuxR family transcriptional regulator
GWF1_Sphingobium_63_6_gwf1_scaffold_4306_trna_1
unknown

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comp(2946..3017)
DNA (72bp)
transferRNA
GWF1_Sphingobium_63_6_gwf1_scaffold_4306_5
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3062..3319)
DNA (258bp) protein (86aa)
hypothetical protein Tax=GWF1_Sphingomonadales_63_6_curated
GWF1_Sphingobium_63_6_gwf1_scaffold_4306_6
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3369..4007
DNA (639bp) protein (213aa)
Periplasmic aromatic aldehyde oxidoreductase,iron-sulfur subunit YagT n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MQM3_9SPHN
(2Fe-2S)-binding domain-containing protein; K13483 xanthine dehydrogenase YagT iron-sulfur-binding subunit Tax=GWF1_Sphingomonadales_63_6_curated
(2Fe-2S)-binding domain-containing protein rbh
GWF1_Sphingobium_63_6_gwf1_scaffold_4306_7
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4004..4960
DNA (957bp) protein (319aa)
yagS; xanthine dehydrogenase (EC:1.17.1.4); K11178 xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4] Tax=GWF1_Sphingomonadales_63_6_curated
yagS; xanthine dehydrogenase (EC:1.17.1.4) rbh
Periplasmic aromatic aldehyde oxidoreductase, FAD binding subunit YagS n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MS18_9SPHN
GWF1_Sphingobium_63_6_gwf1_scaffold_4306_8
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5251..6126)
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Duganella zoogloeoides RepID=UPI000378C5DD
hypothetical protein Tax=GWF1_Sphingomonadales_63_6_curated
GWF1_Sphingobium_63_6_gwf1_scaffold_4306_9
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6506..7123
DNA (618bp) protein (206aa)
xanthine dehydrogenase (EC:1.17.1.4); K11177 xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4] Tax=GWF1_Sphingomonadales_63_6_curated
xanthine dehydrogenase (EC:1.17.1.4)
xanthine dehydrogenase n=1 Tax=Sphingobium xenophagum RepID=UPI000372FB05
GWF1_Sphingobium_63_6_gwf1_scaffold_4306_10
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7163..7843
DNA (681bp) protein (227aa)
Peptidyl-prolyl cis-trans isomerase ppiA n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MME9_9SPHN
cyclophilin type peptidyl-prolyl cis-trans isomerase Tax=GWF1_Sphingomonadales_63_6_curated
cyclophilin type peptidyl-prolyl cis-trans isomerase
GWF1_Sphingobium_63_6_gwf1_scaffold_4306_11
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7847..8083)
DNA (237bp) protein (79aa)
UPI0003D5B57D related cluster n=1 Tax=unknown RepID=UPI0003D5B57D
Membrane protein {ECO:0000313|EMBL:EXS71306.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. Ant17.
Putative membrane protein
GWF1_Sphingobium_63_6_gwf1_scaffold_4306_12
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8199..8891
DNA (693bp) protein (231aa)
UPI0003D68F1F related cluster n=1 Tax=unknown RepID=UPI0003D68F1F
hypothetical protein Tax=GWF1_Sphingomonadales_63_6_curated
hypothetical protein
Displaying 13 items

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