ggKbase home page

GWF1_Sphingobium_63_6_gwf1_scaffold_6350

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF1_Sphingobium_63_6_gwf1_scaffold_6350_1
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(77..883)
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0IVY0_9SPHN
hypothetical protein; K14160 protein ImuA Tax=GWF1_Sphingomonadales_63_6_curated
hypothetical protein rbh
GWF1_Sphingobium_63_6_gwf1_scaffold_6350_2
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(991..1782)
DNA (792bp) protein (264aa)
transglutaminase n=1 Tax=Sphingobium xenophagum RepID=UPI0002F52269
transglutaminase domain-containing protein Tax=GWF1_Sphingomonadales_63_6_curated
transglutaminase domain-containing protein
GWF1_Sphingobium_63_6_gwf1_scaffold_6350_3
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(2104..3177)
DNA (1074bp) protein (358aa)
Protein RecA n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MP56_9SPHN
protein recA; K03553 recombination protein RecA Tax=GWF1_Sphingomonadales_63_6_curated
protein recA
GWF1_Sphingobium_63_6_gwf1_scaffold_6350_4
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3277..3636)
DNA (360bp) protein (120aa)
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains n=1 Tax=Sphingobium sp. AP49 RepID=J2WAD5_9SPHN
CheY-like response regulator Tax=GWF1_Sphingomonadales_63_6_curated
CheY-like response regulator
GWF1_Sphingobium_63_6_gwf1_scaffold_6350_5
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3723..4775)
DNA (1053bp) protein (351aa)
kinA; two-component system sensor sporulation kinase A; K13587 two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3] Tax=GWF1_Sphingomonadales_63_6_curated
histidine kinase n=1 Tax=Sphingobium xenophagum RepID=UPI00036AD4B1
kinA; two-component system sensor sporulation kinase A
GWF1_Sphingobium_63_6_gwf1_scaffold_6350_6
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4738..6153)
DNA (1416bp) protein (472aa)
multi-sensor hybrid histidine kinase; K13587 two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3] Tax=GWF1_Sphingomonadales_63_6_curated
Sensory box histidine kinase/response regulator n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MNJ8_9SPHN
multi-sensor hybrid histidine kinase
GWF1_Sphingobium_63_6_gwf1_scaffold_6350_7
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6200..6793)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MS78_9SPHN
hypothetical protein; K09928 hypothetical protein Tax=GWF1_Sphingomonadales_63_6_curated
hypothetical protein
GWF1_Sphingobium_63_6_gwf1_scaffold_6350_8
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6793..7275)
DNA (483bp) protein (161aa)
SsrA-binding protein n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MT03_9SPHN
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphing
smpB; SsrA-binding protein
GWF1_Sphingobium_63_6_gwf1_scaffold_6350_9
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7896..8291)
DNA (396bp) protein (132aa)
dapA; dihydrodipicolinate synthase; K01714 dihydrodipicolinate synthase [EC:4.2.1.52] Tax=GWF1_Sphingomonadales_63_6_curated
dapA; dihydrodipicolinate synthase (EC:4.2.1.52)
dihydrodipicolinate synthase n=1 Tax=Sphingobium xenophagum RepID=UPI0002EB0AD3
GWF1_Sphingobium_63_6_gwf1_scaffold_6350_10
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8391..9857
DNA (1467bp) protein (489aa)
putative lytic transglycosylase (EC:3.2.1.-); K08309 soluble lytic murein transglycosylase [EC:3.2.1.-] Tax=GWF1_Sphingomonadales_63_6_curated
putative lytic transglycosylase (EC:3.2.1.-)
lytic transglycosylase n=1 Tax=Sphingobium xenophagum RepID=UPI000369E9BE
GWF1_Sphingobium_63_6_gwf1_scaffold_6350_11
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9854..10438
DNA (585bp) protein (195aa)
lytic transglycosylase catalytic subunit; K08309 soluble lytic murein transglycosylase [EC:3.2.1.-] Tax=GWF1_Sphingomonadales_63_6_curated
lytic transglycosylase n=1 Tax=Sphingobium xenophagum RepID=UPI00037DBE27
lytic transglycosylase catalytic subunit
GWF1_Sphingobium_63_6_gwf1_scaffold_6350_12
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10513..10998
DNA (486bp) protein (162aa)
Transcription elongation factor GreB n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MNK3_9SPHN
Transcription elongation factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; Transcript cleavage factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteob
greB; transcription elongation factor GreB
GWF1_Sphingobium_63_6_gwf1_scaffold_6350_13
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11035..11220)
DNA (186bp) protein (62aa)
hypothetical protein n=2 Tax=Sphingobium xenophagum RepID=UPI0002DE9628
Uncharacterized protein {ECO:0000313|EMBL:EXS69641.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp.
hypothetical protein
GWF1_Sphingobium_63_6_gwf1_scaffold_6350_14
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11308..12588)
DNA (1281bp) protein (427aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0002EEB1EE
methyl-accepting chemotaxis sensory transducer Tax=GWF1_Sphingomonadales_63_6_curated
methyl-accepting chemotaxis sensory transducer
GWF1_Sphingobium_63_6_gwf1_scaffold_6350_15
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12680..12877)
DNA (198bp) protein (66aa)
UDP-galactose-lipid carrier transferase MED92 n=1 Tax=Sphingobium xenophagum RepID=UPI00030F5165
Polyphosphate kinase 2 Tax=GWF1_Sphingomonadales_63_6_curated
Polyphosphate kinase 2
Displaying 15 items

View Taxonomy