ggKbase home page

GWF1_Sphingobium_63_6_gwf1_scaffold_9647

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF1_Sphingobium_63_6_gwf1_scaffold_9647_1
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..426
DNA (426bp) protein (142aa)
cmk; cytidylate kinase (EC:2.7.4.14); K00945 cytidylate kinase [EC:2.7.4.14] Tax=GWF1_Sphingomonadales_63_6_curated
cmk; cytidylate kinase (EC:2.7.4.14)
UPI0003D62097 related cluster n=1 Tax=unknown RepID=UPI0003D62097
GWF1_Sphingobium_63_6_gwf1_scaffold_9647_2
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1293..1646)
DNA (354bp) protein (118aa)
Tax=GWF1_Sphingomonadales_63_6_curated
GWF1_Sphingobium_63_6_gwf1_scaffold_9647_3
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2465..2755
DNA (291bp) protein (97aa)
UPI0003D5F5AF related cluster n=1 Tax=unknown RepID=UPI0003D5F5AF
ihfB; integration host factor beta subunit; K05788 integration host factor subunit beta Tax=GWF1_Sphingomonadales_63_6_curated
ihfB; integration host factor beta subunit
GWF1_Sphingobium_63_6_gwf1_scaffold_9647_4
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3900..4046)
DNA (147bp) protein (49aa)
Tax=GWF1_Sphingomonadales_63_6_curated
GWF1_Sphingobium_63_6_gwf1_scaffold_9647_5
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5117..5587
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00036D15F4
TonB-dependent receptor {ECO:0000313|EMBL:EXS70368.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp.
TonB-dependent receptor
GWF1_Sphingobium_63_6_gwf1_scaffold_9647_6
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5629..6873
DNA (1245bp) protein (415aa)
Isopenicillin N epimerase (EC:5.1.1.17) Tax=GWF1_Sphingomonadales_63_6_curated
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00036CF3D3
penicillin epimerase
GWF1_Sphingobium_63_6_gwf1_scaffold_9647_7
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7070..7438
DNA (369bp) protein (123aa)
UPI0003D61BCD related cluster n=1 Tax=unknown RepID=UPI0003D61BCD
ECF subfamily RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWF1_Sphingomonadales_63_6_curated
ECF subfamily RNA polymerase sigma-70 factor
GWF1_Sphingobium_63_6_gwf1_scaffold_9647_8
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7447..8358
DNA (912bp) protein (304aa)
UPI0003D68591 related cluster n=1 Tax=unknown RepID=UPI0003D68591
anti-FecI sigma factor FecR; K07165 transmembrane sensor Tax=GWF1_Sphingomonadales_63_6_curated
anti-FecI sigma factor FecR
GWF1_Sphingobium_63_6_gwf1_scaffold_9647_9
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8484..9110)
DNA (627bp) protein (209aa)
Tax=GWF1_Sphingomonadales_63_6_curated
GWF1_Sphingobium_63_6_gwf1_scaffold_9647_10
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9492..11348
DNA (1857bp) protein (619aa)
TonB-denpendent receptor n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262C06F
TonB-dependent receptor Tax=GWF1_Sphingomonadales_63_6_curated
TonB-dependent receptor
GWF1_Sphingobium_63_6_gwf1_scaffold_9647_11
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11393..12517
DNA (1125bp) protein (375aa)
alkaline phosphatase family protein; K01077 alkaline phosphatase [EC:3.1.3.1] Tax=GWF1_Sphingomonadales_63_6_curated
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000376AEB2
alkaline phosphatase family protein
Displaying 11 items

View Taxonomy