ggKbase home page

GWF2_Clostridiales_38_85_gwf2_scaffold_1054

Search features with annotation key words

Displaying items 1-30 of 90 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF2_Clostridiales_38_85_gwf2_scaffold_1054_1
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(2..304)
DNA (303bp) protein (101aa)
id=2672229 bin=GWF2_Clostridiales_38_85 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
id=2672229 Tax=GWF2_Clostridiales_38_85_curated
GWF2_Clostridiales_38_85_gwf2_scaffold_1054_2
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(604..1419)
DNA (816bp) protein (272aa)
id=2672230 bin=GWF2_Clostridiales_38_85 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
id=2672230 Tax=GWF2_Clostridiales_38_85_curated
GWF2_Clostridiales_38_85_gwf2_scaffold_1054_3
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

1879..3528
DNA (1650bp) protein (550aa)
pgm4; Pgm (EC:5.4.2.1) Tax=GWF2_Clostridiales_38_85_curated
gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase GpmI (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase id=2672231 bin=GWF2_Clostridiales_38_85 species=[Clostridium] stercorarium genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
GWF2_Clostridiales_38_85_gwf2_scaffold_1054_4
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

3553..4266
DNA (714bp) protein (238aa)
Putative uncharacterized protein id=2672235 bin=GWF2_Clostridiales_38_85 species=Clostridium methylpentosum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
peptidase M50 Tax=GWF2_Clostridiales_38_85_curated
peptidase M50
GWF2_Clostridiales_38_85_gwf2_scaffold_1054_5
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

4273..4986
DNA (714bp) protein (238aa)
ScpA/B protein id=2672419 bin=GWF2_Clostridiales_38_85 species=Clostridium leptum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
condensin subunit ScpA Tax=GWF2_Clostridiales_38_85_curated
chromosome segregation and condensation protein ScpA
GWF2_Clostridiales_38_85_gwf2_scaffold_1054_6
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

4993..5652
DNA (660bp) protein (220aa)
Segregation and condensation protein B id=2672422 bin=GWF2_Clostridiales_38_85 species=Ruminococcus bromii genus=Ruminococcus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
segregation and condensation protein B Tax=GWF2_Clostridiales_38_85_curated
scpB; Segregation and condensation protein B
GWF2_Clostridiales_38_85_gwf2_scaffold_1054_7
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

5652..6272
DNA (621bp) protein (207aa)
id=2672425 bin=GWF2_Clostridiales_38_85 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
id=2672425 Tax=GWF2_Clostridiales_38_85_curated
GWF2_Clostridiales_38_85_gwf2_scaffold_1054_8
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

6407..6868
DNA (462bp) protein (154aa)
Sporulation protein YtfJ id=2672427 bin=GWF2_Clostridiales_38_85 species=Clostridium leptum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
Sporulation protein YtfJ Tax=GWF2_Clostridiales_38_85_curated
Sporulation protein YtfJ
GWF2_Clostridiales_38_85_gwf2_scaffold_1054_9
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

7039..8250
DNA (1212bp) protein (404aa)
peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] Tax=GWF2_Clostridiales_38_85_curated
Serine-type D-Ala-D-Ala carboxypeptidase id=2672429 bin=GWF2_Clostridiales_38_85 species=Clostridium sp. MSTE9 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
GWF2_Clostridiales_38_85_gwf2_scaffold_1054_10
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

8243..8968
DNA (726bp) protein (242aa)
pseudouridine synthase; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] Tax=GWF2_Clostridiales_38_85_curated
Pseudouridine synthase id=2672431 bin=GWF2_Clostridiales_38_85 species=Cellulosilyticum lentocellum genus=Cellulosilyticum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
pseudouridine synthase
GWF2_Clostridiales_38_85_gwf2_scaffold_1054_11
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

8961..9335
DNA (375bp) protein (125aa)
id=2672433 bin=GWF2_Clostridiales_38_85 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
id=2672433 Tax=GWF2_Clostridiales_38_85_curated
GWF2_Clostridiales_38_85_gwf2_scaffold_1054_12
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

9364..9654
DNA (291bp) protein (97aa)
Putative RNA-binding protein, YhbY family id=2672434 bin=GWF2_Clostridiales_38_85 species=Clostridium leptum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
conserved hypothetical protein TIGR00253 Tax=GWF2_Clostridiales_38_85_curated
hypothetical protein
GWF2_Clostridiales_38_85_gwf2_scaffold_1054_13
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

9651..10250
DNA (600bp) protein (200aa)
nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:2.7.7.18); K00969 nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] Tax=GWF2_Clostridiales_38_85_curated
nadD; nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:2.7.7.18)
putative nicotinate-nucleotide adenylyltransferase id=2672437 bin=GWF2_Clostridiales_38_85 species=Ruminococcus flavefaciens genus=Ruminococcus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
GWF2_Clostridiales_38_85_gwf2_scaffold_1054_14
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

10267..10875
DNA (609bp) protein (203aa)
HD domain protein id=2672441 bin=GWF2_Clostridiales_38_85 species=Clostridium perfringens genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
HD domain protein Tax=GWF2_Clostridiales_38_85_curated
HD domain-containing protein
GWF2_Clostridiales_38_85_gwf2_scaffold_1054_15
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

10872..11264
DNA (393bp) protein (131aa)
Iojap-like protein id=2672447 bin=GWF2_Clostridiales_38_85 species=Clostridium sp. MSTE9 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
iojap-like protein Tax=GWF2_Clostridiales_38_85_curated
ribosome-associated protein
GWF2_Clostridiales_38_85_gwf2_scaffold_1054_16
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists


11301..13700
DNA (2400bp) protein (800aa)
leucyl-tRNA synthetase, eubacterial and mitochondrial family (EC:6.1.1.4) Tax=GWF2_Clostridiales_38_85_curated
leuS; Leucine-tRNA ligase (EC:6.1.1.4)
Leucine--tRNA ligase id=2672450 bin=GWF2_Clostridiales_38_85 species=Subdoligranulum sp. 4_3_54A2FAA genus=Subdoligranulum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
GWF2_Clostridiales_38_85_gwf2_scaffold_1054_17
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

13842..16370
DNA (2529bp) protein (843aa)
heavy metal translocating P-type ATPase (EC:3.6.3.4)
Copper-exporting ATPase id=2672456 bin=GWF2_Clostridiales_38_85 species=Anaerostipes caccae genus=Anaerostipes taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
copA; Copper-exporting P-type ATPase A Tax=GWF2_Clostridiales_38_85_curated
GWF2_Clostridiales_38_85_gwf2_scaffold_1054_18
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

16580..17344
DNA (765bp) protein (255aa)
Methyltransferase type 12 id=2672458 bin=GWF2_Clostridiales_38_85 species=Clostridium carboxidivorans genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
type 12 methyltransferase Tax=GWF2_Clostridiales_38_85_curated
Methyltransferase type 12
GWF2_Clostridiales_38_85_gwf2_scaffold_1054_19
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

17422..17598
DNA (177bp) protein (59aa)
id=2672463 bin=GWF2_Clostridiales_38_85 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
id=2672463 Tax=GWF2_Clostridiales_38_85_curated
GWF2_Clostridiales_38_85_gwf2_scaffold_1054_20
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

17555..17869
DNA (315bp) protein (105aa)
id=2672464 bin=GWF2_Clostridiales_38_85 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
id=2672464 Tax=GWF2_Clostridiales_38_85_curated
GWF2_Clostridiales_38_85_gwf2_scaffold_1054_21
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(17910..18434)
DNA (525bp) protein (175aa)
hypothetical protein AcelC_20181 id=2672465 bin=GWF2_Clostridiales_38_85 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
hypothetical protein Tax=GWF2_Clostridiales_38_85_curated
hypothetical protein
GWF2_Clostridiales_38_85_gwf2_scaffold_1054_22
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(18505..18870)
DNA (366bp) protein (122aa)
Putative uncharacterized protein id=2672468 bin=GWF2_Clostridiales_38_85 species=Desulfosporosinus youngiae genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
hypothetical protein Tax=GWF2_Clostridiales_38_85_curated
hypothetical protein
GWF2_Clostridiales_38_85_gwf2_scaffold_1054_23
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(18893..19807)
DNA (915bp) protein (305aa)
Antirepressor regulating drug resistance protein id=2672471 bin=GWF2_Clostridiales_38_85 species=Desulfosporosinus meridiei genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
antirepressor regulating drug resistance protein Tax=GWF2_Clostridiales_38_85_curated
antirepressor regulating drug resistance protein
GWF2_Clostridiales_38_85_gwf2_scaffold_1054_24
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(19823..20224)
DNA (402bp) protein (134aa)
Transcriptional repressor, CopY family id=2672475 bin=GWF2_Clostridiales_38_85 species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
CopY family transcriptional regulator Tax=GWF2_Clostridiales_38_85_curated
CopY family transcriptional regulator
GWF2_Clostridiales_38_85_gwf2_scaffold_1054_25
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(20417..20614)
DNA (198bp) protein (66aa)
Small, acid-soluble spore protein, alpha/beta type id=2672478 bin=GWF2_Clostridiales_38_85 species=Clostridium leptum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
sspA; small acid-soluble spore protein; K06421 small acid-soluble spore protein D (minor alpha/beta-type SASP) Tax=GWF2_Clostridiales_38_85_curated
Small acid-soluble spore protein
GWF2_Clostridiales_38_85_gwf2_scaffold_1054_26
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

20909..21595
DNA (687bp) protein (229aa)
id=2672481 bin=GWF2_Clostridiales_38_85 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
id=2672481 Tax=GWF2_Clostridiales_38_85_curated
GWF2_Clostridiales_38_85_gwf2_scaffold_1054_27
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(21664..22611)
DNA (948bp) protein (316aa)
adenosine deaminase (EC:3.5.4.4); K01488 adenosine deaminase [EC:3.5.4.4] Tax=GWF2_Clostridiales_38_85_curated
adenosine deaminase (EC:3.5.4.4) rbh
Adenosine deaminase id=2672483 bin=GWF2_Clostridiales_38_85 species=Clostridium phytofermentans genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
GWF2_Clostridiales_38_85_gwf2_scaffold_1054_28
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(22702..25011)
DNA (2310bp) protein (770aa)
DNA topoisomerase III; K03169 DNA topoisomerase III [EC:5.99.1.2] Tax=GWF2_Clostridiales_38_85_curated
DNA topoisomerase id=2672486 bin=GWF2_Clostridiales_38_85 species=unknown genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
DNA topoisomerase III
GWF2_Clostridiales_38_85_gwf2_scaffold_1054_29
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(25339..26196)
DNA (858bp) protein (286aa)
ABC transporter ATPase component (EC:3.6.3.-)
Bacitracin transport ATP-binding protein BcrA id=2672488 bin=GWF2_Clostridiales_38_85 species=unknown genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
ABC transporter ATP-binding protein Tax=GWF2_Clostridiales_38_85_curated
GWF2_Clostridiales_38_85_gwf2_scaffold_1054_30
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(26193..28538)
DNA (2346bp) protein (782aa)
hypothetical protein Tax=GWF2_Clostridiales_38_85_curated
Uncharacterized protein id=2672610 bin=GWF2_Clostridiales_38_85 species=unknown genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
hypothetical protein
Displaying items 1-30 of 90 in total

View Taxonomy