ggKbase home page

GWF2_Clostridiales_38_85_gwf2_scaffold_958

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF2_Clostridiales_38_85_gwf2_scaffold_958_1
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

157..348
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:536 RepID=R5ZIX0_9FIRM
Uncharacterized protein Tax=GWF2_Clostridiales_38_85_curated
GWF2_Clostridiales_38_85_gwf2_scaffold_958_2
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

769..1398
DNA (630bp) protein (210aa)
Uncharacterized protein id=4651969 bin=GWF2_Clostridiales_38_85 species=[Eubacterium] dolichum genus=unknown taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
hypothetical protein Tax=GWF2_Clostridiales_38_85_curated
hypothetical protein
GWF2_Clostridiales_38_85_gwf2_scaffold_958_3
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

1391..2311
DNA (921bp) protein (307aa)
Putative uncharacterized protein id=4651970 bin=GWF2_Clostridiales_38_85 species=Ruminococcus champanellensis genus=Ruminococcus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
Domain of unknown function (DUF1814). Tax=GWF2_Clostridiales_38_85_curated
Domain of unknown function (DUF1814).
GWF2_Clostridiales_38_85_gwf2_scaffold_958_4
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

2304..3524
DNA (1221bp) protein (407aa)
Type I restriction-modification system methyltransferase subunit id=4651971 bin=GWF2_Clostridiales_38_85 species=butyrate-producing bacterium SS3/4 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
Type I restriction-modification system methyltransferase subunit Tax=GWF2_Clostridiales_38_85_curated
Type I restriction-modification system methyltransferase subunit
GWF2_Clostridiales_38_85_gwf2_scaffold_958_5
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

3521..4237
DNA (717bp) protein (239aa)
Type I restriction-modification system methyltransferase subunit id=4651972 bin=GWF2_Clostridiales_38_85 species=butyrate-producing bacterium SS3/4 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
Type I restriction-modification system methyltransferase subunit Tax=GWF2_Clostridiales_38_85_curated
Type I restriction-modification system methyltransferase subunit
GWF2_Clostridiales_38_85_gwf2_scaffold_958_6
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

4221..5315
DNA (1095bp) protein (365aa)
Restriction enzyme BgcI subunit beta id=4651973 bin=GWF2_Clostridiales_38_85 species=Bifidobacterium gallicum genus=Bifidobacterium taxon_order=Bifidobacteriales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
putative methylase Tax=GWF2_Clostridiales_38_85_curated
putative methylase
GWF2_Clostridiales_38_85_gwf2_scaffold_958_7
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

5420..6931
DNA (1512bp) protein (504aa)
Putative uncharacterized protein id=4651974 bin=GWF2_Clostridiales_38_85 species=Coprobacillus sp. 8_2_54BFAA genus=Coprobacillus taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
Predicted ATP-dependent endonuclease of the OLD family Tax=GWF2_Clostridiales_38_85_curated
Predicted ATP-dependent endonuclease of the OLD family
GWF2_Clostridiales_38_85_gwf2_scaffold_958_8
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

6976..7389
DNA (414bp) protein (138aa)
Putative uncharacterized protein id=4651975 bin=GWF2_Clostridiales_38_85 species=Coprobacillus sp. 8_2_54BFAA genus=Coprobacillus taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
Putative uncharacterized protein Tax=GWF2_Clostridiales_38_85_curated
GWF2_Clostridiales_38_85_gwf2_scaffold_958_9
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

7405..9141
DNA (1737bp) protein (579aa)
hypothetical protein; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12] Tax=GWF2_Clostridiales_38_85_curated
Putative uncharacterized protein id=4651976 bin=GWF2_Clostridiales_38_85 species=Coprobacillus sp. 8_2_54BFAA genus=Coprobacillus taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
hypothetical protein
GWF2_Clostridiales_38_85_gwf2_scaffold_958_10
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(9210..9587)
DNA (378bp) protein (126aa)
Putative uncharacterized protein id=4651977 bin=GWF2_Clostridiales_38_85 species=Eubacterium sp. 3_1_31 genus=Eubacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
hypothetical protein Tax=GWF2_Clostridiales_38_85_curated
hypothetical protein
GWF2_Clostridiales_38_85_gwf2_scaffold_958_11
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(9741..10775)
DNA (1035bp) protein (345aa)
Putative plasmid recombination enzyme id=4651978 bin=GWF2_Clostridiales_38_85 species=Marvinbryantia formatexigens genus=Marvinbryantia taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
Plasmid recombination enzyme. Tax=GWF2_Clostridiales_38_85_curated
Plasmid recombination enzyme.
GWF2_Clostridiales_38_85_gwf2_scaffold_958_12
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(11057..11770)
DNA (714bp) protein (238aa)
Uncharacterized protein id=4651979 bin=GWF2_Clostridiales_38_85 species=Selenomonas ruminantium genus=Selenomonas taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
hypothetical protein Tax=GWF2_Clostridiales_38_85_curated
hypothetical protein
GWF2_Clostridiales_38_85_gwf2_scaffold_958_13
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(11771..12040)
DNA (270bp) protein (90aa)
Uncharacterized protein (Fragment) id=4651980 bin=GWF2_Clostridiales_38_85 species=human gut metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
hypothetical protein Tax=GWF2_Clostridiales_38_85_curated
hypothetical protein
GWF2_Clostridiales_38_85_gwf2_scaffold_958_14
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(12049..12198)
DNA (150bp) protein (50aa)
id=4651981 bin=GWF2_Clostridiales_38_85 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
id=4651981 Tax=GWF2_Clostridiales_38_85_curated
GWF2_Clostridiales_38_85_gwf2_scaffold_958_15
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(12188..12520)
DNA (333bp) protein (111aa)
Uncharacterized protein id=4651982 bin=GWF2_Clostridiales_38_85 species=human gut metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
hypothetical protein Tax=GWF2_Clostridiales_38_85_curated
hypothetical protein
GWF2_Clostridiales_38_85_gwf2_scaffold_958_16
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(12524..13576)
DNA (1053bp) protein (351aa)
Phage integrase id=4651983 bin=GWF2_Clostridiales_38_85 species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
Site-specific recombinase XerD Tax=GWF2_Clostridiales_38_85_curated
Site-specific recombinase XerD
GWF2_Clostridiales_38_85_gwf2_scaffold_958_17
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(13580..13777)
DNA (198bp) protein (66aa)
Putative uncharacterized protein id=4651984 bin=GWF2_Clostridiales_38_85 species=Clostridium sp. ASF356 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
hypothetical protein Tax=GWF2_Clostridiales_38_85_curated
hypothetical protein
GWF2_Clostridiales_38_85_gwf2_scaffold_958_18
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

14310..14810
DNA (501bp) protein (167aa)
Helix-turn-helix id=4651985 bin=GWF2_Clostridiales_38_85 species=Faecalibacterium prausnitzii genus=Faecalibacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
Helix-turn-helix. Tax=GWF2_Clostridiales_38_85_curated
Helix-turn-helix.
GWF2_Clostridiales_38_85_gwf2_scaffold_958_19
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

14838..15236
DNA (399bp) protein (133aa)
hypothetical protein AcelC_00840 id=4651986 bin=GWF2_Clostridiales_38_85 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
hypothetical protein AcelC_00840 Tax=GWF2_Clostridiales_38_85_curated
GWF2_Clostridiales_38_85_gwf2_scaffold_958_20
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(15407..17254)
DNA (1848bp) protein (616aa)
guaA; GMP synthetase; K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] Tax=GWF2_Clostridiales_38_85_curated
guaA; GMP synthase glutamine-hydrolysing (EC:6.3.5.2)
Putative uncharacterized protein TCIL3000_0_55050 id=4652053 bin=GWF2_Clostridiales_38_85 species=Guillardia theta genus=Guillardia taxon_order=Pyrenomonadales taxon_class=Cryptophyta phylum=unknown tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
GWF2_Clostridiales_38_85_gwf2_scaffold_958_21
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(17277..18206)
DNA (930bp) protein (310aa)
Putative uncharacterized protein id=4652060 bin=GWF2_Clostridiales_38_85 species=Subdoligranulum sp. 4_3_54A2FAA genus=Subdoligranulum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
hypothetical protein Tax=GWF2_Clostridiales_38_85_curated
oxidoreductase
GWF2_Clostridiales_38_85_gwf2_scaffold_958_22
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists


18460..18726
DNA (267bp) protein (89aa)
30S ribosomal protein S15 id=4652066 bin=GWF2_Clostridiales_38_85 species=Clostridium leptum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
SSU ribosomal protein S15P Tax=GWF2_Clostridiales_38_85_curated
SSU ribosomal protein S15P
GWF2_Clostridiales_38_85_gwf2_scaffold_958_23
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

18953..21046
DNA (2094bp) protein (698aa)
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8) Tax=GWF2_Clostridiales_38_85_curated
pnp; Polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase id=4652073 bin=GWF2_Clostridiales_38_85 species=Clostridium leptum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
GWF2_Clostridiales_38_85_gwf2_scaffold_958_24
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

21193..22020
DNA (828bp) protein (276aa)
hypothetical protein
id=4652079 bin=GWF2_Clostridiales_38_85 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
id=4652079 Tax=GWF2_Clostridiales_38_85_curated
GWF2_Clostridiales_38_85_gwf2_scaffold_958_25
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

22131..25304
DNA (3174bp) protein (1058aa)
Uncharacterized protein Tax=GWF2_Clostridiales_38_85_curated
Uncharacterized protein id=4652080 bin=GWF2_Clostridiales_38_85 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
GWF2_Clostridiales_38_85_gwf2_scaffold_958_26
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

25441..26193
DNA (753bp) protein (251aa)
id=4652082 bin=GWF2_Clostridiales_38_85 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
id=4652082 Tax=GWF2_Clostridiales_38_85_curated
GWF2_Clostridiales_38_85_gwf2_scaffold_958_27
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(26249..27388)
DNA (1140bp) protein (380aa)
Putative uncharacterized protein id=4652083 bin=GWF2_Clostridiales_38_85 species=Clostridium methylpentosum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
carboxynorspermidine decarboxylase Tax=GWF2_Clostridiales_38_85_curated
carboxynorspermidine decarboxylase
GWF2_Clostridiales_38_85_gwf2_scaffold_958_28
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(27388..28596)
DNA (1209bp) protein (403aa)
carboxynorspermidine dehydrogenase (EC:1.5.1.7) Tax=GWF2_Clostridiales_38_85_curated
carboxynorspermidine dehydrogenase (EC:1.5.1.7)
Putative uncharacterized protein id=4652085 bin=GWF2_Clostridiales_38_85 species=Clostridium methylpentosum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
GWF2_Clostridiales_38_85_gwf2_scaffold_958_29
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(28596..29468)
DNA (873bp) protein (291aa)
speB; agmatinase SpeB; K01480 agmatinase [EC:3.5.3.11] Tax=GWF2_Clostridiales_38_85_curated
Agmatinase SpeB id=4652087 bin=GWF2_Clostridiales_38_85 species=Acetobacterium woodii genus=Acetobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
agmatinase Speb
GWF2_Clostridiales_38_85_gwf2_scaffold_958_30
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(29449..30309)
DNA (861bp) protein (287aa)
speE; spermidine synthase; K00797 spermidine synthase [EC:2.5.1.16] Tax=GWF2_Clostridiales_38_85_curated
speE; spermidine synthase (EC:2.5.1.16)
Spermidine synthase id=4652089 bin=GWF2_Clostridiales_38_85 species=Clostridium leptum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
Displaying items 1-30 of 43 in total

View Taxonomy