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GWF2_Desulfobacula_41_7_gwf2_scaffold_10887

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF2_Desulfobacula_41_7_gwf2_scaffold_10887_1
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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3..941
DNA (939bp) protein (313aa)
Helicase, Snf2 family n=1 Tax=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) RepID=C0QG17_DESAH
Helicase, Snf2 family Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
Helicase, Snf2 family
GWF2_Desulfobacula_41_7_gwf2_scaffold_10887_2
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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1034..1363
DNA (330bp) protein (110aa)
Thioredoxin n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NC79_DESTT
trxA; Thioredoxin TrxA Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
trxA; Thioredoxin TrxA
GWF2_Desulfobacula_41_7_gwf2_scaffold_10887_3
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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1376..2299
DNA (924bp) protein (308aa)
trxB; thioredoxin reductase TrxB (EC:1.8.1.9) Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
trxB; thioredoxin reductase TrxB (EC:1.8.1.9)
TrxB: thioredoxin reductase n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0N247_DESTT
GWF2_Desulfobacula_41_7_gwf2_scaffold_10887_4
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2296..2949
DNA (654bp) protein (218aa)
transporter n=1 Tax=Desulfospira joergensenii RepID=UPI0003B6C9A9
DNA uptake lipoprotein Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
DNA uptake lipoprotein
GWF2_Desulfobacula_41_7_gwf2_scaffold_10887_5
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3033..3227
DNA (195bp) protein (65aa)
50S ribosomal protein L28 n=1 Tax=Desulfospira joergensenii RepID=UPI0003B450E7
rpmB; 50S ribosomal protein L28 RpmB Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
rpmB; 50S ribosomal protein L28 RpmB
GWF2_Desulfobacula_41_7_gwf2_scaffold_10887_6
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3312..5468)
DNA (2157bp) protein (719aa)
relA; GTP pyrophosphokinase RelA (EC:2.7.6.5) Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
relA; GTP pyrophosphokinase RelA (EC:2.7.6.5)
RelA: GTP pyrophosphokinase n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NKR2_DESTT
GWF2_Desulfobacula_41_7_gwf2_scaffold_10887_7
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(5479..6987)
DNA (1509bp) protein (503aa)
proS; prolyl-tRNA synthetase ProS (EC:6.1.1.15) Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
proS; prolyl-tRNA synthetase ProS (EC:6.1.1.15)
Proline--tRNA ligase n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NND7_DESTT
GWF2_Desulfobacula_41_7_gwf2_scaffold_10887_8
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6974..8050)
DNA (1077bp) protein (359aa)
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase IspG (EC:1.17.7.1) Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase IspG (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NCF1_DESTT
GWF2_Desulfobacula_41_7_gwf2_scaffold_10887_9
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8194..9036)
DNA (843bp) protein (281aa)
Xylose isomerase domain protein, TIM barrel n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NKQ8_DESTT
xylose isomerase domain-containing protein Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
xylose isomerase domain-containing protein
GWF2_Desulfobacula_41_7_gwf2_scaffold_10887_10
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9024..10295)
DNA (1272bp) protein (424aa)
Sensor protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2H128_9BACT
PAS domain S-box Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
PAS domain S-box
GWF2_Desulfobacula_41_7_gwf2_scaffold_10887_11
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10337..11287)
DNA (951bp) protein (317aa)
Cobalamin biosynthesis protein CobD n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NND3_DESTT
cbiB; cobalamin biosynthesis protein CbiB Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
cbiB; cobalamin biosynthesis protein CbiB
GWF2_Desulfobacula_41_7_gwf2_scaffold_10887_12
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11280..12365)
DNA (1086bp) protein (362aa)
cobD; threonine-phosphate decarboxylase CobD (EC:4.1.1.81) Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
cobD; threonine-phosphate decarboxylase CobD (EC:4.1.1.81)
CobD: threonine-phosphate decarboxylase n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NCE9_DESTT
GWF2_Desulfobacula_41_7_gwf2_scaffold_10887_13
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12379..13131)
DNA (753bp) protein (251aa)
Cobalamin synthase n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NPS4_DESTT
cobS; cobalamin synthase CobS Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
cobS; cobalamin synthase CobS
GWF2_Desulfobacula_41_7_gwf2_scaffold_10887_14
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13134..14075)
DNA (942bp) protein (314aa)
Radical SAM domain protein n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NSZ7_DESTT
radical SAM domain-containing protein Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
radical SAM domain-containing protein
GWF2_Desulfobacula_41_7_gwf2_scaffold_10887_15
RifOxyA12_full_Desulfobacula_46_16_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14072..14614)
DNA (543bp) protein (181aa)
CobU: predicted bifunctional adenosylcobalamin biosynthesis protein n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NKQ3_DESTT
cobU; bifunctional adenosylcobalamin biosynthesis protein CobU Tax=RifOxyA12_full_Desulfobacula_46_16_curated
cobU; bifunctional adenosylcobalamin biosynthesis protein CobU
GWF2_Desulfobacula_41_7_gwf2_scaffold_10887_16
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14763..15149)
DNA (387bp) protein (129aa)
two component system sensor histidine kinase, GAF region (EC:2.7.3.-) Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
two component system sensor histidine kinase, GAF region (EC:2.7.3.-)
Two component system sensor histidine kinase, GAF region n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NNC8_DESTT
Displaying 16 items

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