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GWF2_Desulfobacula_41_7_gwf2_scaffold_4567

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Displaying 28 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF2_Desulfobacula_41_7_gwf2_scaffold_4567_1
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..546
DNA (546bp) protein (182aa)
thymidylate synthase (EC:2.1.1.-) Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
thymidylate synthase (EC:2.1.1.-)
Putative thymidylate synthase n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0N2M5_DESTT
GWF2_Desulfobacula_41_7_gwf2_scaffold_4567_2
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

563..1024
DNA (462bp) protein (154aa)
GCN5-related N-acetyltransferase n=2 Tax=Shewanella RepID=A1RFK9_SHESW
N-acetyltransferase GCN5; K02348 ElaA protein Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
N-acetyltransferase GCN5
GWF2_Desulfobacula_41_7_gwf2_scaffold_4567_3
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1099..1590)
DNA (492bp) protein (164aa)
universal stress protein UspA n=1 Tax=Desulfospira joergensenii RepID=UPI0003B61681
uspA14; protein UspA14 Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
uspA14; protein UspA14
GWF2_Desulfobacula_41_7_gwf2_scaffold_4567_4
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1669..2328)
DNA (660bp) protein (220aa)
hypothetical protein n=1 Tax=Desulfospira joergensenii RepID=UPI0003B75304
HTH-type transcriptional regulator Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
HTH-type transcriptional regulator
GWF2_Desulfobacula_41_7_gwf2_scaffold_4567_5
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4085..4195)
DNA (111bp) protein (37aa)
Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
GWF2_Desulfobacula_41_7_gwf2_scaffold_4567_6
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4288..5034
DNA (747bp) protein (249aa)
amino acid ABC transporter periplasmic protein Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
ABC-type amino acid transport/signal transduction systems, periplasmic component/domain id=2956330 bin=GWC1_Spirochaetes_27_15 species=Hahella chejuensis genus=Hahella taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
amino acid ABC transporter periplasmic protein
GWF2_Desulfobacula_41_7_gwf2_scaffold_4567_7
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5116..5541)
DNA (426bp) protein (142aa)
Isochorismatase hydrolase n=1 Tax=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) RepID=A7GKJ5_BACCN
isochorismatase hydrolase Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
isochorismatase hydrolase
GWF2_Desulfobacula_41_7_gwf2_scaffold_4567_8
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5690..6286
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI00036C9ABF
AraC family transcriptional regulator Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
AraC family transcriptional regulator
GWF2_Desulfobacula_41_7_gwf2_scaffold_4567_9
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6359..8272)
DNA (1914bp) protein (638aa)
molecular chaperone DnaK n=1 Tax=Desulfospira joergensenii RepID=UPI0003B658C3
chaperone protein DnaK; K04043 molecular chaperone DnaK Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
chaperone protein DnaK
GWF2_Desulfobacula_41_7_gwf2_scaffold_4567_10
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8491..11661
DNA (3171bp) protein (1057aa)
Putative uncharacterized protein n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YH27_9DELT
signal transduction histidine kinase, nitrogen specific, NtrB Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
signal transduction histidine kinase, nitrogen specific, NtrB
GWF2_Desulfobacula_41_7_gwf2_scaffold_4567_11
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11767..12111)
DNA (345bp) protein (115aa)
N-6 DNA methylase; K03427 type I restriction enzyme M protein [EC:2.1.1.72] Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
Putative site-specific DNA-methyltransferase (adenine-specific) (EC:2.1.1.72)
Probable type I restriction enzyme BthVORF4518P M protein n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YF37_9DELT
GWF2_Desulfobacula_41_7_gwf2_scaffold_4567_12
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12519..12680
DNA (162bp) protein (54aa)
Putative uncharacterized protein n=1 Tax=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) RepID=C0QG98_DESAH
hypothetical protein; K09117 hypothetical protein Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
hypothetical protein
GWF2_Desulfobacula_41_7_gwf2_scaffold_4567_13
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12722..14395
DNA (1674bp) protein (558aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XHC7_9FIRM
peptidase M20 Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
Peptidase M20
GWF2_Desulfobacula_41_7_gwf2_scaffold_4567_14
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14430..15173)
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI00037AD2E0
putative ABC transporter substrate-binding protein Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
Conserved periplasmic binding protein of unknown function
GWF2_Desulfobacula_41_7_gwf2_scaffold_4567_15
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15419..17011
DNA (1593bp) protein (531aa)
two component system sensor protein (EC:2.7.13.3) Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
two component system sensor protein (EC:2.7.13.3)
histidine kinase n=1 Tax=Desulfospira joergensenii RepID=UPI0003B56904
GWF2_Desulfobacula_41_7_gwf2_scaffold_4567_16
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17047..17628)
DNA (582bp) protein (194aa)
Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
GWF2_Desulfobacula_41_7_gwf2_scaffold_4567_17
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18260..19360
DNA (1101bp) protein (367aa)
TrpD: anthranilate phosphoribosyltransferase n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0ND61_DESTT
trpD; anthranilate phosphoribosyltransferase TrpD Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
trpD; anthranilate phosphoribosyltransferase TrpD
GWF2_Desulfobacula_41_7_gwf2_scaffold_4567_18
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19364..19564
DNA (201bp) protein (67aa)
hypothetical protein n=1 Tax=Desulfospira joergensenii RepID=UPI0003B73830
hypothetical protein Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
hypothetical protein
GWF2_Desulfobacula_41_7_gwf2_scaffold_4567_19
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19902..21674
DNA (1773bp) protein (591aa)
cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase CobT (EC:2.4.2.21) Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase CobT (EC:2.4.2.21)
CobT: predicted nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0N3K4_DESTT
GWF2_Desulfobacula_41_7_gwf2_scaffold_4567_20
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21687..22613)
DNA (927bp) protein (309aa)
MarR family transcriptional regulator n=1 Tax=Desulfospira joergensenii RepID=UPI0003B4CF31
MarR family transcriptional regulator with acetyltransferase activity Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
transcriptional regulator
GWF2_Desulfobacula_41_7_gwf2_scaffold_4567_21
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22679..22861)
DNA (183bp) protein (61aa)
Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
GWF2_Desulfobacula_41_7_gwf2_scaffold_4567_22
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22877..23674)
DNA (798bp) protein (266aa)
Dihydropteroate synthase (DHPS) n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0N3K1_DESTT
dihydropteroate synthase (DHPS) Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
dihydropteroate synthase (DHPS) rbh
GWF2_Desulfobacula_41_7_gwf2_scaffold_4567_23
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23700..24680)
DNA (981bp) protein (327aa)
Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
GWF2_Desulfobacula_41_7_gwf2_scaffold_4567_24
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24854..25351
DNA (498bp) protein (166aa)
Putative metal-binding protein n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7WIZ5_DESOD
putative metal-binding protein Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
metal-binding protein
GWF2_Desulfobacula_41_7_gwf2_scaffold_4567_25
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25386..25763
DNA (378bp) protein (126aa)
ThiJ/PfpI n=1 Tax=Pseudomonas viridiflava UASWS0038 RepID=K6BGE9_PSEVI
ThiJ/PfpI family protein Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
ThiJ/PfpI family protein
GWF2_Desulfobacula_41_7_gwf2_scaffold_4567_26
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25779..26531
DNA (753bp) protein (251aa)
Zn-dependent hydrolase n=1 Tax=Desulfospira joergensenii RepID=UPI0003B3D44B
beta-lactamase Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
beta-lactamase
GWF2_Desulfobacula_41_7_gwf2_scaffold_4567_27
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26583..27026
DNA (444bp) protein (148aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JZS1_DESFR
lactoylglutathione lyase family protein Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
lactoylglutathione lyase family protein
GWF2_Desulfobacula_41_7_gwf2_scaffold_4567_28
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27037..27882)
DNA (846bp) protein (282aa)
rocD; ornithine aminotransferase RocD (EC:2.6.1.13) Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
rocD; ornithine aminotransferase RocD (EC:2.6.1.13)
Ornithine aminotransferase 2 n=1 Tax=Desulfotignum phosphitoxidans DSM 13687 RepID=S0FVY0_9DELT
Displaying 28 items

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