ggKbase home page

GWF2_Desulfobacula_41_7_gwf2_scaffold_7726

Search features with annotation key words

Displaying 27 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF2_Desulfobacula_41_7_gwf2_scaffold_7726_1
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

288..854
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LVC2_DESBD
hypothetical protein Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
hypothetical protein
GWF2_Desulfobacula_41_7_gwf2_scaffold_7726_2
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

851..2221
DNA (1371bp) protein (457aa)
H(+)-transporting two-sector ATPase (EC:3.6.3.14); K03498 trk system potassium uptake protein TrkH Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
H(+)-transporting two-sector ATPase (EC:3.6.3.14)
H(+)-transporting two-sector ATPase n=1 Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LVC3_DESBD
GWF2_Desulfobacula_41_7_gwf2_scaffold_7726_3
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2232..2891
DNA (660bp) protein (220aa)
TrkA-N domain protein n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7U586_DESML
TrkA-N domain-containing protein; K03499 trk system potassium uptake protein TrkA Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
TrkA-N domain-containing protein
GWF2_Desulfobacula_41_7_gwf2_scaffold_7726_4
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3088..3288
DNA (201bp) protein (67aa)
CspA2: major cold shock protein n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NEX0_DESTT
cspA2; major cold shock protein CspA2 Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
cspA2; major cold shock protein CspA2
GWF2_Desulfobacula_41_7_gwf2_scaffold_7726_5
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3408..4064
DNA (657bp) protein (219aa)
Tetratricopeptide TPR repeat-containing protein n=1 Tax=Desulfotignum phosphitoxidans DSM 13687 RepID=S0G4E0_9DELT
cytochrome c biogenesis factor Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
cytochrome c biogenesis factor
GWF2_Desulfobacula_41_7_gwf2_scaffold_7726_6
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4066..4749
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BZ04_NITHN
hypothetical protein; K07043 Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
hypothetical protein
GWF2_Desulfobacula_41_7_gwf2_scaffold_7726_7
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4778..5545)
DNA (768bp) protein (256aa)
(R)-2-hydroxyglutaryl-CoA dehydratase activator HgdC n=1 Tax=Desulfotignum phosphitoxidans DSM 13687 RepID=S0G424_9DELT
hgdC1; protein HgdC1 Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
hgdC1; protein HgdC1
GWF2_Desulfobacula_41_7_gwf2_scaffold_7726_8
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5542..6297)
DNA (756bp) protein (252aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QDI0_DESB2
short-chain dehydrogenase/reductase SDR Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
short-chain dehydrogenase/reductase SDR
GWF2_Desulfobacula_41_7_gwf2_scaffold_7726_9
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6294..7529)
DNA (1236bp) protein (412aa)
hgdA; protein HgdA (EC:4.2.1.-) Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
hgdA; protein HgdA (EC:4.2.1.-)
HgdA n=1 Tax=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) RepID=C0QDT8_DESAH
GWF2_Desulfobacula_41_7_gwf2_scaffold_7726_10
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7543..8655)
DNA (1113bp) protein (371aa)
hgdB1; protein HgdB1 (EC:4.2.1.-) Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
hgdB1; protein HgdB1 (EC:4.2.1.-)
HgdB1 n=1 Tax=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) RepID=C0QDT9_DESAH
GWF2_Desulfobacula_41_7_gwf2_scaffold_7726_11
BJP_IG2102_Syntrophobacterales_60_12, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8657..10378)
DNA (1722bp) protein (574aa)
hypothetical protein n=1 Tax=Desulfospira joergensenii RepID=UPI0003B31A10
AMP-dependent synthetase and ligase
Tax=BJP_IG2102_Syntrophobacterales_60_12
GWF2_Desulfobacula_41_7_gwf2_scaffold_7726_12
Desulfobacterium autotrophicum, Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10516..11133
DNA (618bp) protein (206aa)
HTH-type transcriptional regulator (TetR family protein) n=1 Tax=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) RepID=C0QDU0_DESAH
TetR family transcriptional regulator
HTH-type transcriptional regulator (TetR family protein) {ECO:0000313|EMBL:ACN17361.1}; TaxID=177437 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desu
GWF2_Desulfobacula_41_7_gwf2_scaffold_7726_13
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11130..11966
DNA (837bp) protein (279aa)
flagellin n=1 Tax=Desulfospira joergensenii RepID=UPI0003B47BDB
flagellin domain-containing protein; K02406 flagellin Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
fliC; flagellin
GWF2_Desulfobacula_41_7_gwf2_scaffold_7726_14
Desulfobacula toluolica, Desulfobacula, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11998..13077
DNA (1080bp) protein (360aa)
Geranylgeranyl reductase n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NQ63_DESTT
geranylgeranyl reductase
Geranylgeranyl reductase {ECO:0000313|EMBL:CCK81012.1}; TaxID=651182 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacula.;" source="Desulfobacu
GWF2_Desulfobacula_41_7_gwf2_scaffold_7726_15
RifOxyA12_full_Desulfobacula_46_16_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13348..13686
DNA (339bp) protein (113aa)
GlnB: nitrogen regulatory protein P-II n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NI18_DESTT
glnB; nitrogen regulatory protein P-II GlnB Tax=RifOxyA12_full_Desulfobacula_46_16_curated
glnB; nitrogen regulatory protein P-II GlnB
GWF2_Desulfobacula_41_7_gwf2_scaffold_7726_16
RifOxyA12_full_Desulfobacula_46_16_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13708..15093
DNA (1386bp) protein (462aa)
Amt: ammonium transporter n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NJH2_DESTT
amt; ammonium transporter Amt Tax=RifOxyA12_full_Desulfobacula_46_16_curated
amt; ammonium transporter Amt
GWF2_Desulfobacula_41_7_gwf2_scaffold_7726_17
RifOxyA12_full_Desulfobacula_46_16_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15181..16287)
DNA (1107bp) protein (369aa)
asd; aspartate-semialdehyde dehydrogenase Asd (EC:1.2.1.11) Tax=RifOxyA12_full_Desulfobacula_46_16_curated
asd; aspartate-semialdehyde dehydrogenase Asd (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NAE8_DESTT
GWF2_Desulfobacula_41_7_gwf2_scaffold_7726_18
unknown

Not on your lists

16473..16655
DNA (183bp) protein (61aa)

This feature has no annotations

GWF2_Desulfobacula_41_7_gwf2_scaffold_7726_19

Not on your lists

comp(16675..17043)
DNA (369bp) protein (123aa)
AraC family transcriptional regulator n=1 Tax=Desulfospira joergensenii RepID=UPI0003B4E8A7
Transcriptional regulator, AraC family
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EKD40498.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
GWF2_Desulfobacula_41_7_gwf2_scaffold_7726_20
Paenibacillus larvae, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17164..17508
DNA (345bp) protein (115aa)
DNA methyltransferase n=1 Tax=Desulfospira joergensenii RepID=UPI0003B4DF08
Methylated-DNA-protein-cysteinemethyltransferase {ECO:0000313|EMBL:ETK28597.1}; TaxID=697286 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillu
hypothetical protein
GWF2_Desulfobacula_41_7_gwf2_scaffold_7726_21
Desulfobacula toluolica, Desulfobacula, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17505..18074)
DNA (570bp) protein (190aa)
Conserved uncharacterized protein n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NQ54_DESTT
hypothetical protein
Conserved uncharacterized protein {ECO:0000313|EMBL:CCK81002.1}; TaxID=651182 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacula.;" source="De
GWF2_Desulfobacula_41_7_gwf2_scaffold_7726_22
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

Not on your lists

comp(18052..18393)
DNA (342bp) protein (114aa)
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
GWF2_Desulfobacula_41_7_gwf2_scaffold_7726_23
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

Not on your lists

comp(18335..18733)
DNA (399bp) protein (133aa)
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
GWF2_Desulfobacula_41_7_gwf2_scaffold_7726_24
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19177..19404)
DNA (228bp) protein (76aa)
Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
GWF2_Desulfobacula_41_7_gwf2_scaffold_7726_25
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19705..20589
DNA (885bp) protein (295aa)
Permease of the drug/metabolite transporter (DMT) superfamily n=1 Tax=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) RepID=C0QC60_DESAH
permease of the drug/metabolite transporter (DMT) superfamily Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
permease of the drug/metabolite transporter (DMT) superfamily
GWF2_Desulfobacula_41_7_gwf2_scaffold_7726_26
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20626..22530)
DNA (1905bp) protein (635aa)
two component system sensor histidine kinase (EC:2.7.13.3) Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
two component system sensor histidine kinase (EC:2.7.13.3)
Two component system sensor histidine kinase n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NHZ9_DESTT
GWF2_Desulfobacula_41_7_gwf2_scaffold_7726_trna_1
unknown

Not on your lists

comp(22676..22747)
DNA (72bp)
transferRNA
Displaying 27 items

View Taxonomy