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GWF2_Desulfobacula_41_7_gwf2_scaffold_5186

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Displaying 27 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF2_Desulfobacula_41_7_gwf2_scaffold_5186_1
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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3..362
DNA (360bp) protein (120aa)
peptide ABC transporter ATP-binding protein n=1 Tax=Desulfospira joergensenii RepID=UPI0003B5D914
dppD3; protein DppD3; K12371 dipeptide transport system ATP-binding protein Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
dppD3; protein DppD3
GWF2_Desulfobacula_41_7_gwf2_scaffold_5186_2
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

355..1332
DNA (978bp) protein (326aa)
peptide ABC transporter ATP-binding protein n=1 Tax=Desulfospira joergensenii RepID=UPI0003B7B86E
dppF2; protein DppF2; K12372 dipeptide transport system ATP-binding protein Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
dppF2; protein DppF2
GWF2_Desulfobacula_41_7_gwf2_scaffold_5186_3
Desulfobacterium autotrophicum, Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1925..2200
DNA (276bp) protein (92aa)
Transposase (IS1294 family protein) n=1 Tax=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) RepID=C0QCW9_DESAH
transposase (IS1294 family protein)
Transposase (IS1294 family protein) {ECO:0000313|EMBL:ACN17201.1}; TaxID=177437 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium.;" sourc
GWF2_Desulfobacula_41_7_gwf2_scaffold_5186_4
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2197..2451
DNA (255bp) protein (85aa)
Beta-lactamase domain protein n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NAW0_DESTT
beta-lactamase Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
beta-lactamase
GWF2_Desulfobacula_41_7_gwf2_scaffold_5186_5
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2448..3635)
DNA (1188bp) protein (396aa)
GAF sensor signal transduction histidine kinase (EC:2.7.3.-); K02482 two-component system, NtrC family, sensor kinase [EC:2.7.13.3] Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
Histidine kinase id=4964072 bin=GWA2__Bacteriovorax-rel_49_15 species=Thioalkalivibrio thiocyanoxidans genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2__Bacteriovorax-rel_49_15 organism_group=Deltaproteobacteria
histidine kinase
GWF2_Desulfobacula_41_7_gwf2_scaffold_5186_6
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3917..4996)
DNA (1080bp) protein (360aa)
Metallo-beta-lactamase family protein Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
Metallo-beta-lactamase family protein id=4546815 bin=GWC2_Syntrophus__56_31 species=Desulfovibrio hydrothermalis genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
Metallo-beta-lactamase family protein
GWF2_Desulfobacula_41_7_gwf2_scaffold_5186_7
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5136..5711)
DNA (576bp) protein (192aa)
cAMP-binding protein n=1 Tax=Desulfovibrio magneticus str. Maddingley MBC34 RepID=K6FJE7_9DELT
hypothetical protein Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
hypothetical protein
GWF2_Desulfobacula_41_7_gwf2_scaffold_5186_8
unknown

Not on your lists

5995..6273
DNA (279bp) protein (93aa)

This feature has no annotations

GWF2_Desulfobacula_41_7_gwf2_scaffold_5186_9
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6415..7113
DNA (699bp) protein (233aa)
AzlC: branched-chain amino acid transport protein n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NT47_DESTT
azlC; branched-chain amino acid transport protein AzlC Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
azlC; branched-chain amino acid transport protein AzlC
GWF2_Desulfobacula_41_7_gwf2_scaffold_5186_10
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7106..7414
DNA (309bp) protein (103aa)
Prediced branched-chain amino acid transport protein, related to AzlD n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NKW1_DESTT
branched-chain amino acid transport protein Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
branched-chain amino acid transport protein
GWF2_Desulfobacula_41_7_gwf2_scaffold_5186_11
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7426..8268
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Desulfospira joergensenii RepID=UPI0003B52E5D
hypothetical protein Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
hypothetical protein
GWF2_Desulfobacula_41_7_gwf2_scaffold_5186_12
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8298..8738)
DNA (441bp) protein (147aa)
PspC: phage shock protein C n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NT44_DESTT
pspC; phage shock protein C PspC Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
pspC; phage shock protein C PspC
GWF2_Desulfobacula_41_7_gwf2_scaffold_5186_13
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8982..9665)
DNA (684bp) protein (228aa)
PspA: phage shock protein A n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NNH4_DESTT
pspA; phage shock protein A PspA Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
pspA; phage shock protein A PspA
GWF2_Desulfobacula_41_7_gwf2_scaffold_5186_14
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9888..10973
DNA (1086bp) protein (362aa)
PspF: sigma54-specific transcriptional activator of phage shock protein operon n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NCI3_DESTT
pspF; sigma54-specific transcriptional activator of phage shock protein operon PspF Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
pspF; sigma54-specific transcriptional activator of phage shock protein operon PspF
GWF2_Desulfobacula_41_7_gwf2_scaffold_5186_15
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11185..11535
DNA (351bp) protein (117aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Ferroglobus placidus DSM 10642 RepID=D3RY22_FERPA id=1247808 bin=RBG9 species=Ferroglobus placidus genus=Ferroglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=RBG9 organism_group=Chloroflexi
4Fe-4S ferredoxin Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
4Fe-4S ferredoxin
GWF2_Desulfobacula_41_7_gwf2_scaffold_5186_16
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11569..11958
DNA (390bp) protein (130aa)
Putative 4Fe-4S ferredoxin n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NFU0_DESTT
4Fe-4S ferredoxin Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
4Fe-4S ferredoxin
GWF2_Desulfobacula_41_7_gwf2_scaffold_5186_17
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11968..12156
DNA (189bp) protein (63aa)
Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
GWF2_Desulfobacula_41_7_gwf2_scaffold_5186_18
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12131..14206)
DNA (2076bp) protein (692aa)
peptigoglycan-binding protein LysM n=1 Tax=Desulfospira joergensenii RepID=UPI0003B686E5
LysM repeat-containing protein Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
LysM repeat-containing protein
GWF2_Desulfobacula_41_7_gwf2_scaffold_5186_19
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14301..15482)
DNA (1182bp) protein (394aa)
aminotransferase n=1 Tax=Desulfospira joergensenii RepID=UPI0003B4BF6C
GntR family transcriptional regulator Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
GntR family transcriptional regulator
GWF2_Desulfobacula_41_7_gwf2_scaffold_5186_20
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15932..16414
DNA (483bp) protein (161aa)
Xanthine phosphoribosyltransferase (EC:2.4.2.22); K00769 xanthine phosphoribosyltransferase [EC:2.4.2.22] Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
Xanthine phosphoribosyltransferase (EC:2.4.2.22)
xanthine phosphoribosyltransferase n=1 Tax=Desulfospira joergensenii RepID=UPI0003B46736
GWF2_Desulfobacula_41_7_gwf2_scaffold_5186_21
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16469..17698)
DNA (1230bp) protein (410aa)
argG; argininosuccinate synthase ArgG (EC:6.3.4.5) Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
argG; argininosuccinate synthase ArgG (EC:6.3.4.5)
Argininosuccinate synthase n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NPX8_DESTT
GWF2_Desulfobacula_41_7_gwf2_scaffold_5186_22
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18080..18721)
DNA (642bp) protein (214aa)
Regulatory protein TetR n=1 Tax=Desulfovibrio desulfuricans ND132 RepID=F0JIM6_DESDE
regulatory protein TetR Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
regulatory protein TetR
GWF2_Desulfobacula_41_7_gwf2_scaffold_5186_23
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18821..19354)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NNH1_DESTT
hypothetical protein Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
hypothetical protein
GWF2_Desulfobacula_41_7_gwf2_scaffold_5186_24
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19551..19664
DNA (114bp) protein (38aa)
Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
GWF2_Desulfobacula_41_7_gwf2_scaffold_5186_25
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19890..20225)
DNA (336bp) protein (112aa)
Conserved uncharacterized protein n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NJY8_DESTT
hypothetical protein Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
hypothetical protein
GWF2_Desulfobacula_41_7_gwf2_scaffold_5186_26
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20548..20874
DNA (327bp) protein (109aa)
entB; isochorismatase (EC:3.3.2.1)
isochorismatase hydrolase Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
Isochorismatase family protein id=2377014 bin=GWA2_Bacteroidetes_33_15 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_33_15 organism_group=Bacteroidetes
GWF2_Desulfobacula_41_7_gwf2_scaffold_5186_27
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20896..22749)
DNA (1854bp) protein (618aa)
Predicted AAA ATPase chaperone n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NTS2_DESTT
AAA ATPase chaperone Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
AAA ATPase chaperone
Displaying 27 items

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