ggKbase home page

GWF2_Lentisphaerae_49_21_gwf2_scaffold_908

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF2_Lentisphaerae_49_21_gwf2_scaffold_908_1
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

comp(447..656)
DNA (210bp) protein (70aa)
id=4611789 bin=GWF2_Lentisphaerae_49_21 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
id=4611789 Tax=GWF2_Lentisphaerae_49_21_curated
GWF2_Lentisphaerae_49_21_gwf2_scaffold_908_2
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

comp(963..1169)
DNA (207bp) protein (69aa)
id=4611790 bin=GWF2_Lentisphaerae_49_21 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
id=4611790 Tax=GWF2_Lentisphaerae_49_21_curated
GWF2_Lentisphaerae_49_21_gwf2_scaffold_908_3
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

1416..2399
DNA (984bp) protein (328aa)
LacI family transcriptional regulator id=4611791 bin=GWF2_Lentisphaerae_49_21 species=unknown genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
LacI family transcriptional regulator Tax=GWF2_Lentisphaerae_49_21_curated
Transcriptional regulator, LacI family protein
GWF2_Lentisphaerae_49_21_gwf2_scaffold_908_4
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

2444..3838
DNA (1395bp) protein (465aa)
Transcriptional regulator/sugar kinase-like protein id=4611792 bin=GWF2_Lentisphaerae_49_21 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
hypothetical protein Tax=GWF2_Lentisphaerae_49_21_curated
transcriptional regulator
GWF2_Lentisphaerae_49_21_gwf2_scaffold_908_5
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

3980..5155
DNA (1176bp) protein (392aa)
Oxidoreductase family, NAD-binding Rossmann fold protein id=4611793 bin=GWF2_Lentisphaerae_49_21 species=Treponema phagedenis genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
putative dehydrogenase Tax=GWF2_Lentisphaerae_49_21_curated
putative dehydrogenase
GWF2_Lentisphaerae_49_21_gwf2_scaffold_908_6
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

5318..6166
DNA (849bp) protein (283aa)
DNA-binding transcriptional dual regulator id=4611795 bin=GWF2_Lentisphaerae_49_21 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
LmbE family protein Tax=GWF2_Lentisphaerae_49_21_curated
LmbE family protein
GWF2_Lentisphaerae_49_21_gwf2_scaffold_908_7
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

6294..7196
DNA (903bp) protein (301aa)
Uncharacterized protein id=4611797 bin=GWF2_Lentisphaerae_49_21 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
hypothetical protein Tax=GWF2_Lentisphaerae_49_21_curated
hypothetical protein
GWF2_Lentisphaerae_49_21_gwf2_scaffold_908_8
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

7316..8419
DNA (1104bp) protein (368aa)
Putative uncharacterized protein id=4611894 bin=GWF2_Lentisphaerae_49_21 species=Akkermansia muciniphila genus=Akkermansia taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
hypothetical protein Tax=GWF2_Lentisphaerae_49_21_curated
hypothetical protein
GWF2_Lentisphaerae_49_21_gwf2_scaffold_908_9
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

8497..9411
DNA (915bp) protein (305aa)
NAD-dependent epimerase/dehydratase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] Tax=GWF2_Lentisphaerae_49_21_curated
NAD-dependent epimerase/dehydratase id=4611895 bin=GWF2_Lentisphaerae_49_21 species=Akkermansia muciniphila genus=Akkermansia taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
NAD-dependent epimerase/dehydratase
GWF2_Lentisphaerae_49_21_gwf2_scaffold_908_10
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

9500..9946
DNA (447bp) protein (149aa)
Putative uncharacterized protein id=4611896 bin=GWF2_Lentisphaerae_49_21 species=Leptospirillum sp. Group II '5-way CG' genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
hypothetical protein Tax=GWF2_Lentisphaerae_49_21_curated
hypothetical protein
GWF2_Lentisphaerae_49_21_gwf2_scaffold_908_trna_1
unknown

Not on your lists

10367..10447
DNA (81bp)
transferRNA
GWF2_Lentisphaerae_49_21_gwf2_scaffold_908_trna_2
unknown

Not on your lists

10700..10772
DNA (73bp)
transferRNA
GWF2_Lentisphaerae_49_21_gwf2_scaffold_908_11
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

10875..12086
DNA (1212bp) protein (404aa)
Elongation factor Tu id=4611897 bin=GWF2_Lentisphaerae_49_21 species=unknown genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
elongation factor Tu; K02358 elongation factor Tu Tax=GWF2_Lentisphaerae_49_21_curated
elongation factor Tu
GWF2_Lentisphaerae_49_21_gwf2_scaffold_908_12
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists


12185..12337
DNA (153bp) protein (51aa)
50S ribosomal protein L33 id=4611898 bin=GWF2_Lentisphaerae_49_21 species=Calditerrivibrio nitroreducens genus=Calditerrivibrio taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
LSU ribosomal protein l33p; K02913 large subunit ribosomal protein L33 Tax=GWF2_Lentisphaerae_49_21_curated
50S ribosomal protein L33
GWF2_Lentisphaerae_49_21_gwf2_scaffold_908_trna_3
unknown

Not on your lists

12350..12422
DNA (73bp)
transferRNA
GWF2_Lentisphaerae_49_21_gwf2_scaffold_908_13
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

12465..12662
DNA (198bp) protein (66aa)
Preprotein translocase, SecE subunit id=4611899 bin=GWF2_Lentisphaerae_49_21 species=Coraliomargarita akajimensis genus=Coraliomargarita taxon_order=Puniceicoccales taxon_class=Opitutae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
Preprotein translocase, SecE subunit Tax=GWF2_Lentisphaerae_49_21_curated
GWF2_Lentisphaerae_49_21_gwf2_scaffold_908_14
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

12687..13250
DNA (564bp) protein (188aa)
Transcription antitermination protein nusG id=4611900 bin=GWF2_Lentisphaerae_49_21 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
NusG antitermination factor; K02601 transcriptional antiterminator NusG Tax=GWF2_Lentisphaerae_49_21_curated
transcription antitermination protein NusG
GWF2_Lentisphaerae_49_21_gwf2_scaffold_908_15
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists


13344..13772
DNA (429bp) protein (143aa)
50S ribosomal protein L11 id=4611901 bin=GWF2_Lentisphaerae_49_21 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
rplK; ribosomal protein L11; K02867 large subunit ribosomal protein L11 Tax=GWF2_Lentisphaerae_49_21_curated
rplK; 50S ribosomal protein L11
GWF2_Lentisphaerae_49_21_gwf2_scaffold_908_16
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists


13765..14472
DNA (708bp) protein (236aa)
50S ribosomal protein L1 id=4611902 bin=GWF2_Lentisphaerae_49_21 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
50S ribosomal protein L1; K02863 large subunit ribosomal protein L1 Tax=GWF2_Lentisphaerae_49_21_curated
50S ribosomal protein L1
GWF2_Lentisphaerae_49_21_gwf2_scaffold_908_17
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists


14469..14993
DNA (525bp) protein (175aa)
50S ribosomal protein L10 id=4611903 bin=GWF2_Lentisphaerae_49_21 species=Coraliomargarita akajimensis genus=Coraliomargarita taxon_order=Puniceicoccales taxon_class=Opitutae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
50S ribosomal protein L10; K02864 large subunit ribosomal protein L10 Tax=GWF2_Lentisphaerae_49_21_curated
50S ribosomal protein L10
GWF2_Lentisphaerae_49_21_gwf2_scaffold_908_18
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists


15017..15424
DNA (408bp) protein (136aa)
50S ribosomal protein L7/L12 id=4611904 bin=GWF2_Lentisphaerae_49_21 species=unknown genus=unknown taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
rplL; 50S ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12 Tax=GWF2_Lentisphaerae_49_21_curated
rplL; 50S ribosomal protein L7/L12
GWF2_Lentisphaerae_49_21_gwf2_scaffold_908_19
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

15563..19390
DNA (3828bp) protein (1276aa)
rpoB; DNA-directed RNA polymerase subunit beta; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Tax=GWF2_Lentisphaerae_49_21_curated
DNA-directed RNA polymerase subunit beta id=4611905 bin=GWF2_Lentisphaerae_49_21 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
DNA-directed RNA polymerase subunit beta
GWF2_Lentisphaerae_49_21_gwf2_scaffold_908_20
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

19409..23593
DNA (4185bp) protein (1395aa)
rpoC; DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Tax=GWF2_Lentisphaerae_49_21_curated
DNA-directed RNA polymerase subunit beta' id=4611906 bin=GWF2_Lentisphaerae_49_21 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
rpoC; DNA-directed RNA polymerase subunit beta'
GWF2_Lentisphaerae_49_21_gwf2_scaffold_908_21
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists


23680..24051
DNA (372bp) protein (124aa)
30S ribosomal protein S12 id=4611907 bin=GWF2_Lentisphaerae_49_21 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
rpsL; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 Tax=GWF2_Lentisphaerae_49_21_curated
rpsL; 30S ribosomal protein S12
GWF2_Lentisphaerae_49_21_gwf2_scaffold_908_22
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists


24149..24619
DNA (471bp) protein (157aa)
30S ribosomal protein S7 id=4611908 bin=GWF2_Lentisphaerae_49_21 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
30S ribosomal protein S7; K02992 small subunit ribosomal protein S7 Tax=GWF2_Lentisphaerae_49_21_curated
30S ribosomal protein S7
GWF2_Lentisphaerae_49_21_gwf2_scaffold_908_23
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

24650..26767
DNA (2118bp) protein (706aa)
Elongation factor G id=4611909 bin=GWF2_Lentisphaerae_49_21 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
translation elongation factor G; K02355 elongation factor G Tax=GWF2_Lentisphaerae_49_21_curated
translation elongation factor G
GWF2_Lentisphaerae_49_21_gwf2_scaffold_908_24
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists


26764..27093
DNA (330bp) protein (110aa)
30S ribosomal protein S10 id=4611910 bin=GWF2_Lentisphaerae_49_21 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
rpsJ; 30S ribosomal protein S10; K02946 small subunit ribosomal protein S10 Tax=GWF2_Lentisphaerae_49_21_curated
rpsJ; 30S ribosomal protein S10
GWF2_Lentisphaerae_49_21_gwf2_scaffold_908_25
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists


27143..27787
DNA (645bp) protein (215aa)
50S ribosomal protein L3 id=4611911 bin=GWF2_Lentisphaerae_49_21 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 Tax=GWF2_Lentisphaerae_49_21_curated
50S ribosomal protein L3
GWF2_Lentisphaerae_49_21_gwf2_scaffold_908_26
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists


27798..28460
DNA (663bp) protein (221aa)
50S ribosomal protein L4 id=4611912 bin=GWF2_Lentisphaerae_49_21 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
rplD; 50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 Tax=GWF2_Lentisphaerae_49_21_curated
rplD; 50S ribosomal protein L4
GWF2_Lentisphaerae_49_21_gwf2_scaffold_908_27
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists


28475..28756
DNA (282bp) protein (94aa)
50S ribosomal protein L23 id=4611913 bin=GWF2_Lentisphaerae_49_21 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
rplW; 50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 Tax=GWF2_Lentisphaerae_49_21_curated
rplW; 50S ribosomal protein L23
Displaying items 1-30 of 48 in total

View Taxonomy