ggKbase home page

GWF2_Lentisphaerae_49_21_gwf2_scaffold_1636

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF2_Lentisphaerae_49_21_gwf2_scaffold_1636_1
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

comp(822..1403)
DNA (582bp) protein (194aa)
id=3416096 bin=GWF2_Lentisphaerae_49_21 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
id=3416096 Tax=GWF2_Lentisphaerae_49_21_curated
GWF2_Lentisphaerae_49_21_gwf2_scaffold_1636_2
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

comp(1458..1844)
DNA (387bp) protein (129aa)
Putative uncharacterized protein id=3416098 bin=GWF2_Lentisphaerae_49_21 species=Methylomicrobium album genus=Methylomicrobium taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
Putative uncharacterized protein Tax=GWF2_Lentisphaerae_49_21_curated
GWF2_Lentisphaerae_49_21_gwf2_scaffold_1636_trna_1
unknown

Not on your lists

1959..2030
DNA (72bp)
transferRNA
GWF2_Lentisphaerae_49_21_gwf2_scaffold_1636_3
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

comp(2065..4416)
DNA (2352bp) protein (784aa)
PAS/PAC sensor hybrid histidine kinase id=3416101 bin=GWF2_Lentisphaerae_49_21 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
multi-sensor hybrid histidine kinase Tax=GWF2_Lentisphaerae_49_21_curated
multi-sensor hybrid histidine kinase
GWF2_Lentisphaerae_49_21_gwf2_scaffold_1636_4
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

comp(4609..5052)
DNA (444bp) protein (148aa)
Response regulator receiver protein id=3416107 bin=GWF2_Lentisphaerae_49_21 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
response regulator receiver protein Tax=GWF2_Lentisphaerae_49_21_curated
response regulator receiver protein
GWF2_Lentisphaerae_49_21_gwf2_scaffold_1636_5
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

comp(5326..7524)
DNA (2199bp) protein (733aa)
multi-sensor signal transduction histidine kinase Tax=GWF2_Lentisphaerae_49_21_curated
Multi-sensor signal transduction histidine kinase id=3416111 bin=GWF2_Lentisphaerae_49_21 species=unknown genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
histidine kinase
GWF2_Lentisphaerae_49_21_gwf2_scaffold_1636_6
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

comp(7514..13042)
DNA (5529bp) protein (1843aa)
HAMP domain-containing sensor histidine kinase response regulator Tax=GWF2_Lentisphaerae_49_21_curated
PAS sensor protein id=3416114 bin=GWF2_Lentisphaerae_49_21 species=Holophaga foetida genus=Holophaga taxon_order=Holophagales taxon_class=Holophagae phylum=Acidobacteria tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
HAMP domain-containing sensor histidine kinase response regulator
GWF2_Lentisphaerae_49_21_gwf2_scaffold_1636_7
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

13321..13800
DNA (480bp) protein (160aa)
Putative uncharacterized protein id=3416117 bin=GWF2_Lentisphaerae_49_21 species=Trichomonas vaginalis genus=Trichomonas taxon_order=Trichomonadida taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
hypothetical protein Tax=GWF2_Lentisphaerae_49_21_curated
hypothetical protein
GWF2_Lentisphaerae_49_21_gwf2_scaffold_1636_8
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

comp(13899..14822)
DNA (924bp) protein (308aa)
Quinolinate synthase A id=3416121 bin=GWF2_Lentisphaerae_49_21 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
quinolinate synthase A Tax=GWF2_Lentisphaerae_49_21_curated
quinolinate synthase A
GWF2_Lentisphaerae_49_21_gwf2_scaffold_1636_9
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

14930..15595
DNA (666bp) protein (222aa)
hypothetical protein; K09778 hypothetical protein Tax=GWF2_Lentisphaerae_49_21_curated
Putative uncharacterized protein id=3416124 bin=GWF2_Lentisphaerae_49_21 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
hypothetical protein
GWF2_Lentisphaerae_49_21_gwf2_scaffold_1636_10
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

comp(15644..15937)
DNA (294bp) protein (98aa)
Tax=GWF2_Lentisphaerae_49_21_curated
GWF2_Lentisphaerae_49_21_gwf2_scaffold_1636_trna_2
unknown

Not on your lists

16162..16234
DNA (73bp)
transferRNA
GWF2_Lentisphaerae_49_21_gwf2_scaffold_1636_11
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

comp(16337..17581)
DNA (1245bp) protein (415aa)
Phosphatidylserine decarboxylase-related id=3416129 bin=GWF2_Lentisphaerae_49_21 species=Chlorobium ferrooxidans genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
phosphatidylserine decarboxylase Tax=GWF2_Lentisphaerae_49_21_curated
phosphatidylserine decarboxylase
GWF2_Lentisphaerae_49_21_gwf2_scaffold_1636_12
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

comp(17702..18988)
DNA (1287bp) protein (429aa)
HipA-like protein; K07154 serine/threonine-protein kinase HipA [EC:2.7.11.1] Tax=GWF2_Lentisphaerae_49_21_curated
HipA-like protein id=3416132 bin=GWF2_Lentisphaerae_49_21 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
HipA-like protein
GWF2_Lentisphaerae_49_21_gwf2_scaffold_1636_13
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

comp(18981..19289)
DNA (309bp) protein (103aa)
Transcriptional regulator, XRE family id=3416135 bin=GWF2_Lentisphaerae_49_21 species=Pelodictyon phaeoclathratiforme genus=Pelodictyon taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
XRE family transcriptional regulator Tax=GWF2_Lentisphaerae_49_21_curated
XRE family transcriptional regulator
GWF2_Lentisphaerae_49_21_gwf2_scaffold_1636_14
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

comp(19458..20369)
DNA (912bp) protein (304aa)
Integral membrane protein, YjbE family id=3416140 bin=GWF2_Lentisphaerae_49_21 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
integral membrane protein TerC Tax=GWF2_Lentisphaerae_49_21_curated
integral membrane protein TerC
GWF2_Lentisphaerae_49_21_gwf2_scaffold_1636_15
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

comp(20450..21322)
DNA (873bp) protein (291aa)
Transcriptional regulator, AraC family id=3416144 bin=GWF2_Lentisphaerae_49_21 species=Planctomyces brasiliensis genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
AraC family transcriptional regulator; K02854 AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR Tax=GWF2_Lentisphaerae_49_21_curated
AraC family transcriptional regulator
GWF2_Lentisphaerae_49_21_gwf2_scaffold_1636_16
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

21468..23921
DNA (2454bp) protein (818aa)
glycoside hydrolase family protein; K01192 beta-mannosidase [EC:3.2.1.25] Tax=GWF2_Lentisphaerae_49_21_curated
Beta-mannosidase id=3416148 bin=GWF2_Lentisphaerae_49_21 species=Sphaerochaeta coccoides genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
glycoside hydrolase family protein
GWF2_Lentisphaerae_49_21_gwf2_scaffold_1636_17
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

comp(24009..25067)
DNA (1059bp) protein (353aa)
Arabinose metabolism transcriptional repressor id=3416152 bin=GWF2_Lentisphaerae_49_21 species=Clostridium hathewayi genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
LacI family transcriptional regulator; K02103 GntR family transcriptional regulator, arabinose operon transcriptional repressor Tax=GWF2_Lentisphaerae_49_21_curated
LacI family transcriptional regulator
GWF2_Lentisphaerae_49_21_gwf2_scaffold_1636_18
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

comp(25083..28127)
DNA (3045bp) protein (1015aa)
beta-phosphoglucomutase; K01838 beta-phosphoglucomutase [EC:5.4.2.6] Tax=GWF2_Lentisphaerae_49_21_curated
Beta-phosphoglucomutase id=3416156 bin=GWF2_Lentisphaerae_49_21 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
hypothetical protein
GWF2_Lentisphaerae_49_21_gwf2_scaffold_1636_19
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

comp(28354..30657)
DNA (2304bp) protein (768aa)
glycosyl hydrolase Tax=GWF2_Lentisphaerae_49_21_curated
Beta-galactosidase id=3416160 bin=GWF2_Lentisphaerae_49_21 species=Opitutaceae bacterium TAV5 genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
beta-galactosidase
GWF2_Lentisphaerae_49_21_gwf2_scaffold_1636_20
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

comp(30842..32527)
DNA (1686bp) protein (562aa)
hypothetical protein Tax=GWF2_Lentisphaerae_49_21_curated
Uncharacterized protein id=3416279 bin=GWF2_Lentisphaerae_49_21 species=unknown genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
hypothetical protein
GWF2_Lentisphaerae_49_21_gwf2_scaffold_1636_21
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

comp(32544..33344)
DNA (801bp) protein (267aa)
DNA topoisomerase, type IA, zn finger domain protein id=3416282 bin=GWF2_Lentisphaerae_49_21 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
DNA topoisomerase type IA Zn finger domain-containing protein Tax=GWF2_Lentisphaerae_49_21_curated
DNA topoisomerase type IA Zn finger domain-containing protein
GWF2_Lentisphaerae_49_21_gwf2_scaffold_1636_22
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

comp(33479..33772)
DNA (294bp) protein (98aa)
Putative uncharacterized protein id=3416286 bin=GWF2_Lentisphaerae_49_21 species=Methylomonas methanica genus=Methylomonas taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
hypothetical protein Tax=GWF2_Lentisphaerae_49_21_curated
hypothetical protein
Displaying 24 items

View Taxonomy