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GWF2_Lentisphaerae_49_21_gwf2_scaffold_2566

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF2_Lentisphaerae_49_21_gwf2_scaffold_2566_1
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

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196..798
DNA (603bp) protein (201aa)
id=3872067 bin=GWF2_Lentisphaerae_49_21 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
id=3872067 Tax=GWF2_Lentisphaerae_49_21_curated
GWF2_Lentisphaerae_49_21_gwf2_scaffold_2566_2
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

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1066..2148
DNA (1083bp) protein (361aa)
Transcriptional regulator, LacI family id=3872068 bin=GWF2_Lentisphaerae_49_21 species=Opitutaceae bacterium TAV5 genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator Tax=GWF2_Lentisphaerae_49_21_curated
hypothetical protein
GWF2_Lentisphaerae_49_21_gwf2_scaffold_2566_3
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

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2152..2934
DNA (783bp) protein (261aa)
Type II secretory pathway pseudopilin PulG-like protein id=3872069 bin=GWF2_Lentisphaerae_49_21 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
prepilin-type N-terminal cleavage/methylation domain-containing protein Tax=GWF2_Lentisphaerae_49_21_curated
prepilin-type N-terminal cleavage/methylation domain-containing protein
GWF2_Lentisphaerae_49_21_gwf2_scaffold_2566_4
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

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2937..3674
DNA (738bp) protein (246aa)
Prepilin-type N-terminal cleavage/methylation domain-containing protein id=3872070 bin=GWF2_Lentisphaerae_49_21 species=Opitutaceae bacterium TAV1 genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
prepilin-type N-terminal cleavage / methylation domain Tax=GWF2_Lentisphaerae_49_21_curated
N-terminal cleavage protein
GWF2_Lentisphaerae_49_21_gwf2_scaffold_2566_5
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

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3756..6929
DNA (3174bp) protein (1058aa)
glycosyhydrolase
Uncharacterized protein Tax=GWF2_Lentisphaerae_49_21_curated
Uncharacterized protein id=3872071 bin=GWF2_Lentisphaerae_49_21 species=Opitutaceae bacterium TAV1 genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
GWF2_Lentisphaerae_49_21_gwf2_scaffold_2566_6
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

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7136..8236
DNA (1101bp) protein (367aa)
id=3872072 bin=GWF2_Lentisphaerae_49_21 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
id=3872072 Tax=GWF2_Lentisphaerae_49_21_curated
GWF2_Lentisphaerae_49_21_gwf2_scaffold_2566_7
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

8711..9670
DNA (960bp) protein (320aa)
polA-1; DNA polymerase I; K02335 DNA polymerase I [EC:2.7.7.7] Tax=GWF2_Lentisphaerae_49_21_curated
DNA polymerase id=3872073 bin=GWF2_Lentisphaerae_49_21 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
polA; DNA polymerase I
GWF2_Lentisphaerae_49_21_gwf2_scaffold_2566_8
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

9769..10338
DNA (570bp) protein (190aa)
id=3872074 bin=GWF2_Lentisphaerae_49_21 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
id=3872074 Tax=GWF2_Lentisphaerae_49_21_curated
GWF2_Lentisphaerae_49_21_gwf2_scaffold_2566_9
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

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10352..11392
DNA (1041bp) protein (347aa)
Uncharacterized protein id=3872134 bin=GWF2_Lentisphaerae_49_21 species=Halosarcina pallida genus=Halosarcina taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
acetyl xylan esterase Tax=GWF2_Lentisphaerae_49_21_curated
acetyl xylan esterase
GWF2_Lentisphaerae_49_21_gwf2_scaffold_2566_10
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

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comp(11456..12277)
DNA (822bp) protein (274aa)
hypothetical protein B1040_04545 id=3872135 bin=GWF2_Lentisphaerae_49_21 species=Clostridium hathewayi genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
hypothetical protein; K06167 PhnP protein Tax=GWF2_Lentisphaerae_49_21_curated
hypothetical protein
GWF2_Lentisphaerae_49_21_gwf2_scaffold_2566_trna_1
unknown

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comp(12524..12597)
DNA (74bp)
transferRNA
GWF2_Lentisphaerae_49_21_gwf2_scaffold_2566_11
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

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12735..14786
DNA (2052bp) protein (684aa)
4-amino-4-deoxy-L-arabinose transferase Tax=GWF2_Lentisphaerae_49_21_curated
4-amino-4-deoxy-L-arabinose transferase id=3872136 bin=GWF2_Lentisphaerae_49_21 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
hypothetical protein
GWF2_Lentisphaerae_49_21_gwf2_scaffold_2566_12
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

comp(14800..15636)
DNA (837bp) protein (279aa)
Transcriptional regulator, AraC family id=3872137 bin=GWF2_Lentisphaerae_49_21 species=Clostridium pasteurianum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
AraC family transcriptional regulator Tax=GWF2_Lentisphaerae_49_21_curated
hypothetical protein
GWF2_Lentisphaerae_49_21_gwf2_scaffold_2566_13
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

15921..16979
DNA (1059bp) protein (353aa)
Putative uncharacterized protein id=3872138 bin=GWF2_Lentisphaerae_49_21 species=Treponema azotonutricium genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
hypothetical protein Tax=GWF2_Lentisphaerae_49_21_curated
hypothetical protein
GWF2_Lentisphaerae_49_21_gwf2_scaffold_2566_14
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

comp(16988..17536)
DNA (549bp) protein (183aa)
Putative uncharacterized protein id=3872139 bin=GWF2_Lentisphaerae_49_21 species=Hydrogenivirga sp. 128-5-R1-1 genus=Hydrogenivirga taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
small-conductance mechanosensitive channel Tax=GWF2_Lentisphaerae_49_21_curated
small-conductance mechanosensitive channel
GWF2_Lentisphaerae_49_21_gwf2_scaffold_2566_15
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

comp(17819..19273)
DNA (1455bp) protein (485aa)
fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein Tax=GWF2_Lentisphaerae_49_21_curated
Fumarate reductase/succinate dehydrogenase flavoprotein domain protein id=3872140 bin=GWF2_Lentisphaerae_49_21 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein
GWF2_Lentisphaerae_49_21_gwf2_scaffold_2566_16
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

19368..21584
DNA (2217bp) protein (739aa)
Por secretion system C-terminal sorting domain-containing protein id=3872142 bin=GWF2_Lentisphaerae_49_21 species=Barnesiella intestinihominis genus=Barnesiella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
alpha-1,2-mannosidase Tax=GWF2_Lentisphaerae_49_21_curated
hypothetical protein
GWF2_Lentisphaerae_49_21_gwf2_scaffold_2566_17
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

comp(21805..22542)
DNA (738bp) protein (246aa)
AraC family transcriptional regulator id=3872144 bin=GWF2_Lentisphaerae_49_21 species=Paenibacillus elgii genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain Tax=GWF2_Lentisphaerae_49_21_curated
Ada regulatory protein/6-O-methylguanine-DNA methyltransferase
GWF2_Lentisphaerae_49_21_gwf2_scaffold_2566_18
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

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22970..24040
DNA (1071bp) protein (357aa)
Oxidoreductase domain protein id=3872146 bin=GWF2_Lentisphaerae_49_21 species=Paenibacillus sp. genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
Predicted dehydrogenases and related proteins Tax=GWF2_Lentisphaerae_49_21_curated
Predicted dehydrogenases and related proteins
Displaying 19 items

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