ggKbase home page

GWF2_Lentisphaerae_50_93_gwf2_scaffold_1141

Search features with annotation key words

Displaying items 1-30 of 77 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1141_1
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

630..2957
DNA (2328bp) protein (776aa)
Secreted protein id=2823075 bin=GWF2_Lentisphaerae_50_93 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
secreted protein Tax=GWF2_Lentisphaerae_50_93_curated
secreted protein
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1141_2
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

2967..5447
DNA (2481bp) protein (827aa)
beta-galactosidase (EC:3.2.1.23) Tax=GWF2_Lentisphaerae_50_93_curated
beta-galactosidase (EC:3.2.1.23)
Beta-galactosidase id=2823079 bin=GWF2_Lentisphaerae_50_93 species=Bacillus bataviensis genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1141_3
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(5452..6696)
DNA (1245bp) protein (415aa)
Putative uncharacterized protein id=2823085 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=Sulfurovum taxon_order=unknown taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
hypothetical protein; K07007 Tax=GWF2_Lentisphaerae_50_93_curated
hypothetical protein
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1141_4
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(6868..8469)
DNA (1602bp) protein (534aa)
Glycosyl transferase family 39 id=2823090 bin=GWF2_Lentisphaerae_50_93 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
Dolichyl-phosphate-mannose-protein mannosyltransferase Tax=GWF2_Lentisphaerae_50_93_curated
Dolichyl-phosphate-mannose-protein mannosyltransferase
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1141_5
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

8666..9865
DNA (1200bp) protein (400aa)
trpB; tryptophan synthase subunit beta (EC:4.2.1.20); K01696 tryptophan synthase beta chain [EC:4.2.1.20] Tax=GWF2_Lentisphaerae_50_93_curated
trpB; tryptophan synthase subunit beta (EC:4.2.1.20)
Tryptophan synthase beta chain id=2823095 bin=GWF2_Lentisphaerae_50_93 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1141_6
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

9918..11003
DNA (1086bp) protein (362aa)
lipopolysaccharide heptosyltransferase II; K02843 heptosyltransferase II [EC:2.4.-.-] Tax=GWF2_Lentisphaerae_50_93_curated
ADP-heptose--LPS heptosyltransferase II, putative id=2823103 bin=GWF2_Lentisphaerae_50_93 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
lipopolysaccharide heptosyltransferase II
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1141_7
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

11003..12640
DNA (1638bp) protein (546aa)
Putative uncharacterized protein id=2823109 bin=GWF2_Lentisphaerae_50_93 species=Plesiocystis pacifica genus=Plesiocystis taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
coagulation factor 5/8 type domain-containing protein Tax=GWF2_Lentisphaerae_50_93_curated
coagulation factor 5/8 type domain-containing protein
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1141_8
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

12785..13141
DNA (357bp) protein (119aa)
id=2823118 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
id=2823118 Tax=GWF2_Lentisphaerae_50_93_curated
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1141_9
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(13213..14592)
DNA (1380bp) protein (460aa)
Putative DNA-binding transcriptional regulator id=2823119 bin=GWF2_Lentisphaerae_50_93 species=Rhodanobacter sp. 115 genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
hypothetical protein Tax=GWF2_Lentisphaerae_50_93_curated
hypothetical protein
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1141_10
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(14710..15858)
DNA (1149bp) protein (383aa)
mtlD; mannitol-1-phosphate 5-dehydrogenase; K00009 mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17] Tax=GWF2_Lentisphaerae_50_93_curated
Mannitol-1-phosphate 5-dehydrogenase id=2823122 bin=GWF2_Lentisphaerae_50_93 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
mtlD; mannitol-1-phosphate 5-dehydrogenase
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1141_11
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(15906..16568)
DNA (663bp) protein (221aa)
Uncharacterized protein id=2823126 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
protein of unknown function DUF1498; K09988 hypothetical protein Tax=GWF2_Lentisphaerae_50_93_curated
hypothetical protein
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1141_12
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(16597..17610)
DNA (1014bp) protein (338aa)
PfkB domain protein id=2823130 bin=GWF2_Lentisphaerae_50_93 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
PfkB domain-containing protein Tax=GWF2_Lentisphaerae_50_93_curated
PfkB domain-containing protein
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1141_13
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(17702..18550)
DNA (849bp) protein (283aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148); K00919 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] Tax=GWF2_Lentisphaerae_50_93_curated
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase id=2823136 bin=GWF2_Lentisphaerae_50_93 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1141_14
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(18575..19561)
DNA (987bp) protein (329aa)
Oxidoreductase-like protein id=2823139 bin=GWF2_Lentisphaerae_50_93 species=Verrucomicrobium spinosum genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
mviM; dehydrogenase Tax=GWF2_Lentisphaerae_50_93_curated
mviM; dehydrogenase
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1141_15
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists


comp(19741..20028)
DNA (288bp) protein (96aa)
30S ribosomal protein S19 id=2823308 bin=GWF2_Lentisphaerae_50_93 species=Opitutus terrae genus=Opitutus taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
rpsS; 30S ribosomal protein S19; K02965 small subunit ribosomal protein S19 Tax=GWF2_Lentisphaerae_50_93_curated
rpsS; 30S ribosomal protein S19
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1141_16
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists


comp(20028..20864)
DNA (837bp) protein (279aa)
50S ribosomal protein L2 id=2823311 bin=GWF2_Lentisphaerae_50_93 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 Tax=GWF2_Lentisphaerae_50_93_curated
50S ribosomal protein L2
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1141_17
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists


comp(20887..21168)
DNA (282bp) protein (94aa)
50S ribosomal protein L23 id=2823314 bin=GWF2_Lentisphaerae_50_93 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
rplW; 50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 Tax=GWF2_Lentisphaerae_50_93_curated
rplW; 50S ribosomal protein L23
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1141_18
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists


comp(21184..21849)
DNA (666bp) protein (222aa)
50S ribosomal protein L4 id=2823316 bin=GWF2_Lentisphaerae_50_93 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
rplD; 50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 Tax=GWF2_Lentisphaerae_50_93_curated
rplD; 50S ribosomal protein L4
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1141_19
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists


comp(21860..22504)
DNA (645bp) protein (215aa)
50S ribosomal protein L3 id=2823318 bin=GWF2_Lentisphaerae_50_93 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 Tax=GWF2_Lentisphaerae_50_93_curated
50S ribosomal protein L3
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1141_20
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists


comp(22554..22883)
DNA (330bp) protein (110aa)
30S ribosomal protein S10 id=2823323 bin=GWF2_Lentisphaerae_50_93 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
rpsJ; 30S ribosomal protein S10; K02946 small subunit ribosomal protein S10 Tax=GWF2_Lentisphaerae_50_93_curated
rpsJ; 30S ribosomal protein S10
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1141_21
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(22880..24997)
DNA (2118bp) protein (706aa)
Elongation factor G id=2823328 bin=GWF2_Lentisphaerae_50_93 species=Acetonema longum genus=Acetonema taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
translation elongation factor G; K02355 elongation factor G Tax=GWF2_Lentisphaerae_50_93_curated
translation elongation factor G
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1141_22
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists


comp(25027..25497)
DNA (471bp) protein (157aa)
30S ribosomal protein S7 id=2823332 bin=GWF2_Lentisphaerae_50_93 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
30S ribosomal protein S7; K02992 small subunit ribosomal protein S7 Tax=GWF2_Lentisphaerae_50_93_curated
30S ribosomal protein S7
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1141_23
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists


comp(25596..25967)
DNA (372bp) protein (124aa)
30S ribosomal protein S12 id=2823334 bin=GWF2_Lentisphaerae_50_93 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
rpsL; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 Tax=GWF2_Lentisphaerae_50_93_curated
rpsL; 30S ribosomal protein S12
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1141_24
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(26054..30232)
DNA (4179bp) protein (1393aa)
rpoC; DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Tax=GWF2_Lentisphaerae_50_93_curated
DNA-directed RNA polymerase subunit beta' id=2823335 bin=GWF2_Lentisphaerae_50_93 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
rpoC; DNA-directed RNA polymerase subunit beta'
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1141_25
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(30250..34077)
DNA (3828bp) protein (1276aa)
rpoB; DNA-directed RNA polymerase subunit beta; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Tax=GWF2_Lentisphaerae_50_93_curated
DNA-directed RNA polymerase subunit beta id=2823336 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
DNA-directed RNA polymerase subunit beta
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1141_26
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists


comp(34207..34608)
DNA (402bp) protein (134aa)
50S ribosomal protein L7/L12 id=2823337 bin=GWF2_Lentisphaerae_50_93 species=Desulfurispirillum indicum genus=Desulfurispirillum taxon_order=Chrysiogenales taxon_class=Chrysiogenetes phylum=Chrysiogenetes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
50S ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12 Tax=GWF2_Lentisphaerae_50_93_curated
50S ribosomal protein L7/L12
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1141_27
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists


comp(34633..35157)
DNA (525bp) protein (175aa)
50S ribosomal protein L10 id=2823338 bin=GWF2_Lentisphaerae_50_93 species=Coraliomargarita akajimensis genus=Coraliomargarita taxon_order=Puniceicoccales taxon_class=Opitutae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
50S ribosomal protein L10; K02864 large subunit ribosomal protein L10 Tax=GWF2_Lentisphaerae_50_93_curated
50S ribosomal protein L10
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1141_28
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists


comp(35154..35861)
DNA (708bp) protein (236aa)
50S ribosomal protein L1 id=2823339 bin=GWF2_Lentisphaerae_50_93 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
50S ribosomal protein L1; K02863 large subunit ribosomal protein L1 Tax=GWF2_Lentisphaerae_50_93_curated
50S ribosomal protein L1
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1141_29
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists


comp(35854..36282)
DNA (429bp) protein (143aa)
50S ribosomal protein L11 id=2823340 bin=GWF2_Lentisphaerae_50_93 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
rplK; 50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 Tax=GWF2_Lentisphaerae_50_93_curated
rplK; 50S ribosomal protein L11
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1141_30
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(36377..36940)
DNA (564bp) protein (188aa)
Transcription antitermination protein nusG id=2823341 bin=GWF2_Lentisphaerae_50_93 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
NusG antitermination factor; K02601 transcriptional antiterminator NusG Tax=GWF2_Lentisphaerae_50_93_curated
NusG antitermination factor
Displaying items 1-30 of 77 in total

View Taxonomy