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GWF2_Lentisphaerae_50_93_gwf2_scaffold_1807

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1807_1
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(3..167)
DNA (165bp) protein (55aa)
id=3913747 bin=GWF2_Lentisphaerae_49_21 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
id=3913747 Tax=GWF2_Lentisphaerae_50_93_curated
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1807_2
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(355..690)
DNA (336bp) protein (112aa)
nuclease; K01174 micrococcal nuclease [EC:3.1.31.1] Tax=GWF2_Lentisphaerae_50_93_curated
Thermonuclease id=3576443 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=Sulfurihydrogenibium taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
nuclease
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1807_3
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(784..2388)
DNA (1605bp) protein (535aa)
Nif-specific regulatory protein id=3576447 bin=GWF2_Lentisphaerae_50_93 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
Nif-specific regulatory protein Tax=GWF2_Lentisphaerae_50_93_curated
Nif-specific regulatory protein
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1807_4
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

3317..4141
DNA (825bp) protein (275aa)
nitrogenase iron protein; K02588 nitrogenase iron protein NifH [EC:1.18.6.1] Tax=GWF2_Lentisphaerae_50_93_curated
Nitrogenase iron protein id=3576451 bin=GWF2_Lentisphaerae_50_93 species=Verrucomicrobiae bacterium DG1235 genus=unknown taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
nitrogenase iron protein
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1807_5
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

4228..4560
DNA (333bp) protein (111aa)
Nitrogen regulatory protein P-II id=3576454 bin=GWF2_Lentisphaerae_50_93 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
nitrogen regulatory protein P-II; K02589 nitrogen regulatory protein PII 1 Tax=GWF2_Lentisphaerae_50_93_curated
nitrogen regulatory protein P-II
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1807_6
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

4575..4961
DNA (387bp) protein (129aa)
Nitrogen regulatory protein P-II id=3576457 bin=GWF2_Lentisphaerae_50_93 species=Dehalococcoides mccartyi genus=Dehalococcoides taxon_order=Dehalococcoidales taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
nitrogen regulatory protein P-II; K02590 nitrogen regulatory protein PII 2 Tax=GWF2_Lentisphaerae_50_93_curated
nitrogen regulatory protein P-II
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1807_7
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

4979..6601
DNA (1623bp) protein (541aa)
nitrogenase molybdenum-iron protein subunit alpha (EC:1.18.6.1); K02586 nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1] Tax=GWF2_Lentisphaerae_50_93_curated
nitrogenase molybdenum-iron protein subunit alpha (EC:1.18.6.1)
Nitrogenase protein alpha chain id=3576459 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=unknown taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1807_8
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

6617..8002
DNA (1386bp) protein (462aa)
nifK; Nitrogenase molybdenum-iron protein beta chain (EC:1.18.6.1) Tax=GWF2_Lentisphaerae_50_93_curated
nifK; Nitrogenase molybdenum-iron protein beta chain (EC:1.18.6.1)
Nitrogenase molybdenum-iron protein beta chain id=3576461 bin=GWF2_Lentisphaerae_50_93 species=Desulfovibrio desulfuricans genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1807_9
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

8023..10845
DNA (2823bp) protein (941aa)
nitrogenase MoFe cofactor biosynthesis protein NifE (EC:1.18.6.1); K02587 nitrogenase molybdenum-cofactor synthesis protein NifE Tax=GWF2_Lentisphaerae_50_93_curated
nitrogenase MoFe cofactor biosynthesis protein NifE (EC:1.18.6.1)
Nitrogenase MoFe cofactor biosynthesis protein NifE id=3576605 bin=GWF2_Lentisphaerae_50_93 species=Chlorobium chlorochromatii genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1807_10
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

10858..12126
DNA (1269bp) protein (423aa)
Nitrogenase cofactor biosynthesis protein NifB id=3576612 bin=GWF2_Lentisphaerae_50_93 species=Chlorobium phaeobacteroides genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
nitrogenase cofactor biosynthesis protein NifB; K02585 nitrogen fixation protein NifB Tax=GWF2_Lentisphaerae_50_93_curated
nitrogenase cofactor biosynthesis protein NifB
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1807_11
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

12191..12490
DNA (300bp) protein (100aa)
Ferredoxin, 2Fe-2S id=3576618 bin=GWF2_Lentisphaerae_50_93 species=Dehalococcoides mccartyi genus=Dehalococcoides taxon_order=Dehalococcoidales taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
ferredoxin, 2Fe-2S Tax=GWF2_Lentisphaerae_50_93_curated
ferredoxin, 2Fe-2S
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1807_12
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

12541..13671
DNA (1131bp) protein (377aa)
pyruvate carboxyltransferase; K02594 homocitrate synthase NifV [EC:2.3.3.14] Tax=GWF2_Lentisphaerae_50_93_curated
Pyruvate carboxyltransferase id=3576623 bin=GWF2_Lentisphaerae_50_93 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
pyruvate carboxyltransferase
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1807_13
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

13668..14405
DNA (738bp) protein (246aa)
Possible transmembrane protein id=3576628 bin=GWF2_Lentisphaerae_50_93 species=Chryseobacterium gleum genus=Chryseobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
hypothetical protein; K07090 Tax=GWF2_Lentisphaerae_50_93_curated
Sulfite exporter TauE/SafE
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1807_14
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(14513..15679)
DNA (1167bp) protein (389aa)
VWA containing CoxE family protein id=3576632 bin=GWF2_Lentisphaerae_50_93 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
hypothetical protein Tax=GWF2_Lentisphaerae_50_93_curated
hypothetical protein
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1807_15
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(15676..17988)
DNA (2313bp) protein (771aa)
Putative uncharacterized protein id=3576636 bin=GWF2_Lentisphaerae_50_93 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
hypothetical protein Tax=GWF2_Lentisphaerae_50_93_curated
hypothetical protein
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1807_16
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(17989..19074)
DNA (1086bp) protein (362aa)
ATPase associated with various cellular activities AAA_5 id=3576639 bin=GWF2_Lentisphaerae_50_93 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
MoxR-like ATPase Tax=GWF2_Lentisphaerae_50_93_curated
MoxR-like ATPase
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1807_17
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(19093..20658)
DNA (1566bp) protein (522aa)
hypothetical protein Tax=GWF2_Lentisphaerae_50_93_curated
Putative uncharacterized protein id=3576642 bin=GWF2_Lentisphaerae_50_93 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
hypothetical protein
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1807_18
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(20655..21992)
DNA (1338bp) protein (446aa)
Zinc finger SWIM domain protein id=3576644 bin=GWF2_Lentisphaerae_50_93 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
zinc finger SWIM domain-containing protein Tax=GWF2_Lentisphaerae_50_93_curated
zinc finger SWIM domain-containing protein
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1807_19
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(22234..22653)
DNA (420bp) protein (140aa)
hypothetical protein Tax=GWF2_Lentisphaerae_50_93_curated
Putative uncharacterized protein id=3576646 bin=GWF2_Lentisphaerae_50_93 species=Prosthecochloris vibrioformis genus=Prosthecochloris taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
hypothetical protein
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1807_20
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(22919..23455)
DNA (537bp) protein (179aa)
Rubrerythrin id=3576648 bin=GWF2_Lentisphaerae_50_93 species=Thermoplasmatales archaeon SCGC AB-540-F20 genus=unknown taxon_order=Thermoplasmatales taxon_class=Thermoplasmata phylum=Euryarchaeota tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
rubrerythrin Tax=GWF2_Lentisphaerae_50_93_curated
rubrerythrin
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1807_21
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

23652..24698
DNA (1047bp) protein (349aa)
Transcriptional regulator, GntR family with LacI sensor id=3576650 bin=GWF2_Lentisphaerae_50_93 species=Paenibacillus lactis genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
LacI family transcriptional regulator Tax=GWF2_Lentisphaerae_50_93_curated
LacI family transcriptional regulator
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1807_22
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

24722..28381
DNA (3660bp) protein (1220aa)
Putative carbohydrate binding protein id=3576652 bin=GWF2_Lentisphaerae_50_93 species=Opitutaceae bacterium TAV1 genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
Putative carbohydrate binding protein Tax=GWF2_Lentisphaerae_50_93_curated
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1807_23
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

28488..29042
DNA (555bp) protein (185aa)
id=3576654 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
id=3576654 Tax=GWF2_Lentisphaerae_50_93_curated
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1807_24
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

29301..29498
DNA (198bp) protein (66aa)
Tax=GWF2_Lentisphaerae_50_93_curated
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1807_25
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

29444..31357
DNA (1914bp) protein (638aa)
glycoside hydrolase family protein Tax=GWF2_Lentisphaerae_50_93_curated
Glycosyl hydrolase family 38 N-terminal domain protein id=3576655 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
glycoside hydrolase
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1807_26
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(31526..32278)
DNA (753bp) protein (251aa)
Transcriptional regulator, AraC family id=3576657 bin=GWF2_Lentisphaerae_50_93 species=Stackebrandtia nassauensis genus=Stackebrandtia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
AraC family transcriptional regulator Tax=GWF2_Lentisphaerae_50_93_curated
AraC family transcriptional regulator
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1807_27
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

32395..33072
DNA (678bp) protein (226aa)
id=3576659 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
id=3576659 Tax=GWF2_Lentisphaerae_50_93_curated
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1807_28
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

33103..34173
DNA (1071bp) protein (357aa)
id=3576660 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
id=3576660 Tax=GWF2_Lentisphaerae_50_93_curated
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1807_29
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

34221..35549
DNA (1329bp) protein (443aa)
Putative uncharacterized protein id=3576661 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
Putative uncharacterized protein Tax=GWF2_Lentisphaerae_50_93_curated
Displaying 29 items

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