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GWF2_Lentisphaerae_50_93_gwf2_scaffold_2764

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF2_Lentisphaerae_50_93_gwf2_scaffold_2764_1
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

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comp(3..293)
DNA (291bp) protein (97aa)
two component transcriptional regulator, LuxR family protein id=3921253 bin=GWF2_Lentisphaerae_50_93 species=Verrucomicrobium spinosum genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
two component LuxR family transcriptional regulator Tax=GWF2_Lentisphaerae_50_93_curated
two component LuxR family transcriptional regulator
GWF2_Lentisphaerae_50_93_gwf2_scaffold_2764_2
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

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comp(561..1250)
DNA (690bp) protein (230aa)
Putative uncharacterized protein id=3921254 bin=GWF2_Lentisphaerae_50_93 species=Photobacterium sp. AK15 genus=Photobacterium taxon_order=Vibrionales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
hypothetical protein Tax=GWF2_Lentisphaerae_50_93_curated
hypothetical protein
GWF2_Lentisphaerae_50_93_gwf2_scaffold_2764_3
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

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1538..2122
DNA (585bp) protein (195aa)
Signal transduction histidine kinase, nitrogen specific, NtrB id=3921255 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
signal transduction histidine kinase, nitrogen specific, NtrB Tax=GWF2_Lentisphaerae_50_93_curated
signal transduction histidine kinase, nitrogen specific, NtrB
GWF2_Lentisphaerae_50_93_gwf2_scaffold_2764_4
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

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comp(2147..2320)
DNA (174bp) protein (58aa)
id=3921256 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
id=3921256 Tax=GWF2_Lentisphaerae_50_93_curated
GWF2_Lentisphaerae_50_93_gwf2_scaffold_2764_5
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

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comp(3027..3893)
DNA (867bp) protein (289aa)
hypothetical protein Tax=GWF2_Lentisphaerae_50_93_curated
Putative uncharacterized protein id=3921258 bin=GWF2_Lentisphaerae_50_93 species=Leptospira meyeri genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
hypothetical protein
GWF2_Lentisphaerae_50_93_gwf2_scaffold_2764_6
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

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comp(3890..4498)
DNA (609bp) protein (203aa)
Putative uncharacterized protein id=3921259 bin=GWF2_Lentisphaerae_50_93 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
hypothetical protein Tax=GWF2_Lentisphaerae_50_93_curated
hypothetical protein
GWF2_Lentisphaerae_50_93_gwf2_scaffold_2764_7
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

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4797..5828
DNA (1032bp) protein (344aa)
Transcriptional regulator araR (HTH fused to periplasmic-binding domain) id=3921260 bin=GWF2_Lentisphaerae_50_93 species=Anoxybacillus flavithermus genus=Anoxybacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
araR; transcriptional regulator AraR; K02103 GntR family transcriptional regulator, arabinose operon transcriptional repressor Tax=GWF2_Lentisphaerae_50_93_curated
araR; transcriptional regulator AraR
GWF2_Lentisphaerae_50_93_gwf2_scaffold_2764_8
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

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5847..6560
DNA (714bp) protein (238aa)
Putative uncharacterized protein id=3921261 bin=GWF2_Lentisphaerae_50_93 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
prepilin-type N-terminal cleavage/methylation domain Tax=GWF2_Lentisphaerae_50_93_curated
hypothetical protein
GWF2_Lentisphaerae_50_93_gwf2_scaffold_2764_9
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

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6560..9055
DNA (2496bp) protein (832aa)
beta-mannosidase (EC:3.2.1.25); K01192 beta-mannosidase [EC:3.2.1.25] Tax=GWF2_Lentisphaerae_50_93_curated
beta-mannosidase (EC:3.2.1.25)
Glycosyl hydrolases family 2, immunoglobulin-like beta-sandwich domain id=3921262 bin=GWF2_Lentisphaerae_50_93 species=Verrucomicrobiae bacterium DG1235 genus=unknown taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
GWF2_Lentisphaerae_50_93_gwf2_scaffold_2764_10
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

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9190..9741
DNA (552bp) protein (184aa)
id=3921263 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
id=3921263 Tax=GWF2_Lentisphaerae_50_93_curated
GWF2_Lentisphaerae_50_93_gwf2_scaffold_2764_11
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

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9761..12646
DNA (2886bp) protein (962aa)
alpha amylase id=3921264 bin=GWF2_Lentisphaerae_50_93 species=Rhodopirellula europaea genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
alpha amylase Tax=GWF2_Lentisphaerae_50_93_curated
GWF2_Lentisphaerae_50_93_gwf2_scaffold_2764_12
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

12687..15272
DNA (2586bp) protein (862aa)
alpha amylase Tax=GWF2_Lentisphaerae_50_93_curated
alpha amylase id=3921265 bin=GWF2_Lentisphaerae_50_93 species=Rhodopirellula europaea genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
GWF2_Lentisphaerae_50_93_gwf2_scaffold_2764_13
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

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15392..16915
DNA (1524bp) protein (508aa)
similar to Hexosaminidase domain-containing protein; K14459 hexosaminidase [EC:3.2.1.52] Tax=GWF2_Lentisphaerae_50_93_curated
UPI0001925F09 related cluster id=3921266 bin=GWF2_Lentisphaerae_50_93 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
N-acetyl-beta-hexosaminidase
GWF2_Lentisphaerae_50_93_gwf2_scaffold_2764_14
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

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16905..18734
DNA (1830bp) protein (610aa)
Glycoside hydrolase, family 20, catalytic core id=3921267 bin=GWF2_Lentisphaerae_50_93 species=Opitutaceae bacterium TAV5 genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
hypothetical protein Tax=GWF2_Lentisphaerae_50_93_curated
Glycoside hydrolase, family 20
GWF2_Lentisphaerae_50_93_gwf2_scaffold_2764_15
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

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18775..18924
DNA (150bp) protein (50aa)
Putative uncharacterized protein id=3921269 bin=GWF2_Lentisphaerae_50_93 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
Putative uncharacterized protein Tax=GWF2_Lentisphaerae_50_93_curated
GWF2_Lentisphaerae_50_93_gwf2_scaffold_2764_16
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

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19091..20119
DNA (1029bp) protein (343aa)
Regulatory protein GntR HTH id=3921271 bin=GWF2_Lentisphaerae_50_93 species=Pseudomonas psychrotolerans genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
Regulatory protein GntR HTH Tax=GWF2_Lentisphaerae_50_93_curated
GWF2_Lentisphaerae_50_93_gwf2_scaffold_2764_17
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

20136..20858
DNA (723bp) protein (241aa)
Putative uncharacterized protein id=3921273 bin=GWF2_Lentisphaerae_50_93 species=Opitutaceae bacterium TAV5 genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
prepilin-type N-terminal cleavage/methylation domain Tax=GWF2_Lentisphaerae_50_93_curated
hypothetical protein
GWF2_Lentisphaerae_50_93_gwf2_scaffold_2764_18
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

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20978..22177
DNA (1200bp) protein (400aa)
Peptidase M14 carboxypeptidase A id=3921276 bin=GWF2_Lentisphaerae_50_93 species=Cyclobacterium marinum genus=Cyclobacterium taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
peptidase M14 carboxypeptidase A Tax=GWF2_Lentisphaerae_50_93_curated
peptidase M14 carboxypeptidase A
GWF2_Lentisphaerae_50_93_gwf2_scaffold_2764_19
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

22174..22299
DNA (126bp) protein (42aa)
Tax=GWF2_Lentisphaerae_50_93_curated
GWF2_Lentisphaerae_50_93_gwf2_scaffold_2764_20
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

22595..23281
DNA (687bp) protein (229aa)
Efflux transporter, RND family, MFP subunit id=3921279 bin=GWF2_Lentisphaerae_50_93 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
RND family efflux transporter MFP subunit; K07799 putative multidrug efflux transporter MdtA Tax=GWF2_Lentisphaerae_50_93_curated
RND family efflux transporter MFP subunit
Displaying 20 items

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