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GWF2_Lentisphaerae_50_93_gwf2_scaffold_2543

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF2_Lentisphaerae_50_93_gwf2_scaffold_2543_1
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

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comp(1..1767)
DNA (1767bp) protein (589aa)
S-layer domain protein id=3865664 bin=GWF2_Lentisphaerae_50_93 species=Paenibacillus sp. genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
S-layer protein Tax=GWF2_Lentisphaerae_50_93_curated
hypothetical protein
GWF2_Lentisphaerae_50_93_gwf2_scaffold_2543_2
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(2142..5582)
DNA (3441bp) protein (1147aa)
Protein sidekick-2 id=3865666 bin=GWF2_Lentisphaerae_50_93 species=Shewanella baltica genus=Shewanella taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
fibronectin type III domain-containing protein Tax=GWF2_Lentisphaerae_50_93_curated
fibronectin type III domain-containing protein
GWF2_Lentisphaerae_50_93_gwf2_scaffold_2543_3
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

5855..6883
DNA (1029bp) protein (343aa)
Putative uncharacterized protein id=3865668 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
Putative uncharacterized protein Tax=GWF2_Lentisphaerae_50_93_curated
GWF2_Lentisphaerae_50_93_gwf2_scaffold_2543_4
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

7077..7496
DNA (420bp) protein (140aa)
id=3865670 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
id=3865670 Tax=GWF2_Lentisphaerae_50_93_curated
GWF2_Lentisphaerae_50_93_gwf2_scaffold_2543_5
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

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comp(7621..8640)
DNA (1020bp) protein (340aa)
Chaperone DnaJ domain protein id=3865671 bin=GWF2_Lentisphaerae_50_93 species=Opitutus terrae genus=Opitutus taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
chaperone DnaJ domain-containing protein; K05516 curved DNA-binding protein Tax=GWF2_Lentisphaerae_50_93_curated
chaperone DnaJ domain-containing protein
GWF2_Lentisphaerae_50_93_gwf2_scaffold_2543_6
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(9686..10012)
DNA (327bp) protein (109aa)
recombinase XerD n=1 Tax=SAR324 cluster bacterium SCGC AAA001-C10 RepID=UPI000288F8B9
tmRNA Tax=GWF2_Lentisphaerae_50_93_curated
tmRNA
GWF2_Lentisphaerae_50_93_gwf2_scaffold_2543_7
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(10374..10613)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0S0P8_9BRAD
excinuclease ABC subunit C Tax=GWF2_Lentisphaerae_50_93_curated
excinuclease ABC subunit C
GWF2_Lentisphaerae_50_93_gwf2_scaffold_2543_trna_1
unknown

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comp(10743..10816)
DNA (74bp)
transferRNA
GWF2_Lentisphaerae_50_93_gwf2_scaffold_2543_8
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(10970..11740)
DNA (771bp) protein (257aa)
Exodeoxyribonuclease III id=3865674 bin=GWF2_Lentisphaerae_50_93 species=Methanolobus psychrophilus genus=Methanolobus taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
exodeoxyribonuclease III Tax=GWF2_Lentisphaerae_50_93_curated
exodeoxyribonuclease III
GWF2_Lentisphaerae_50_93_gwf2_scaffold_2543_9
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

11868..13850
DNA (1983bp) protein (661aa)
phospholipid-lipopolysaccharide ABC transporter; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] Tax=GWF2_Lentisphaerae_50_93_curated
Phospholipid-lipopolysaccharide ABC transporter id=3865676 bin=GWF2_Lentisphaerae_50_93 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
phospholipid-lipopolysaccharide ABC transporter
GWF2_Lentisphaerae_50_93_gwf2_scaffold_2543_10
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

14349..15386
DNA (1038bp) protein (346aa)
fatty acid desaturase (acyl-lipid desaturase) (EC:1.14.19.-); K10255 omega-6 fatty acid desaturase (delta-12 desaturase) [EC:1.14.19.-] Tax=GWF2_Lentisphaerae_50_93_curated
fatty acid desaturase (acyl-lipid desaturase) (EC:1.14.19.-)
Fatty acid desaturase (Acyl-lipid desaturase) id=3865678 bin=GWF2_Lentisphaerae_50_93 species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
GWF2_Lentisphaerae_50_93_gwf2_scaffold_2543_11
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

15484..15735
DNA (252bp) protein (84aa)
Putative uncharacterized protein id=3865680 bin=GWF2_Lentisphaerae_50_93 species=Methanoplanus limicola genus=Methanoplanus taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
hypothetical protein Tax=GWF2_Lentisphaerae_50_93_curated
hypothetical protein
GWF2_Lentisphaerae_50_93_gwf2_scaffold_2543_12
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

15947..16564
DNA (618bp) protein (206aa)
Putative uncharacterized protein id=3865682 bin=GWF2_Lentisphaerae_50_93 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
hlpA; Outer membrane protein; K06142 outer membrane protein Tax=GWF2_Lentisphaerae_50_93_curated
hlpA; Outer membrane protein
GWF2_Lentisphaerae_50_93_gwf2_scaffold_2543_13
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

16617..17663
DNA (1047bp) protein (349aa)
lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; K02536 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] Tax=GWF2_Lentisphaerae_50_93_curated
UDP-3-O-acylglucosamine N-acyltransferase id=3865684 bin=GWF2_Lentisphaerae_50_93 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
GWF2_Lentisphaerae_50_93_gwf2_scaffold_2543_14
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

17683..18468
DNA (786bp) protein (262aa)
Putative TPR-domain containing protein id=3865686 bin=GWF2_Lentisphaerae_50_93 species=Leptospirillum ferrooxidans genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
putative TPR-domain containing protein Tax=GWF2_Lentisphaerae_50_93_curated
TPR-domain containing protein
GWF2_Lentisphaerae_50_93_gwf2_scaffold_2543_15
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

18541..20340
DNA (1800bp) protein (600aa)
DNA mismatch repair protein MutL id=3865688 bin=GWF2_Lentisphaerae_50_93 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
DNA mismatch repair protein MutL; K03572 DNA mismatch repair protein MutL Tax=GWF2_Lentisphaerae_50_93_curated
hypothetical protein
GWF2_Lentisphaerae_50_93_gwf2_scaffold_2543_16
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

20530..21561
DNA (1032bp) protein (344aa)
Protein kinase family protein id=3865690 bin=GWF2_Lentisphaerae_50_93 species=Strongylocentrotus purpuratus genus=Strongylocentrotus taxon_order=Echinoida taxon_class=Echinoidea phylum=Echinodermata tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
hypothetical protein Tax=GWF2_Lentisphaerae_50_93_curated
hypothetical protein
GWF2_Lentisphaerae_50_93_gwf2_scaffold_2543_17
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

21595..23715
DNA (2121bp) protein (707aa)
translation elongation factor EF-G Tax=GWF2_Lentisphaerae_50_93_curated
Elongation factor G id=3865692 bin=GWF2_Lentisphaerae_50_93 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
translation elongation factor EF-G
GWF2_Lentisphaerae_50_93_gwf2_scaffold_2543_18
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

23727..24095
DNA (369bp) protein (123aa)
id=3865694 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
id=3865694 Tax=GWF2_Lentisphaerae_50_93_curated
GWF2_Lentisphaerae_50_93_gwf2_scaffold_2543_19
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

24111..25301
DNA (1191bp) protein (397aa)
Putative oxygen-independent coproporphyrinogen III oxidase id=3865695 bin=GWF2_Lentisphaerae_50_93 species=Desulfosporosinus meridiei genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
oxygen-independent coproporphyrinogen III oxidase Tax=GWF2_Lentisphaerae_50_93_curated
oxygen-independent coproporphyrinogen III oxidase
GWF2_Lentisphaerae_50_93_gwf2_scaffold_2543_20
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(25402..26031)
DNA (630bp) protein (210aa)
Putative uncharacterized protein id=3865697 bin=GWF2_Lentisphaerae_50_93 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
hypothetical protein Tax=GWF2_Lentisphaerae_50_93_curated
hypothetical protein
GWF2_Lentisphaerae_50_93_gwf2_scaffold_2543_21
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(26033..27163)
DNA (1131bp) protein (377aa)
Putative uncharacterized protein id=3865699 bin=GWF2_Lentisphaerae_50_93 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
hypothetical protein Tax=GWF2_Lentisphaerae_50_93_curated
hypothetical protein
GWF2_Lentisphaerae_50_93_gwf2_scaffold_2543_22
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(27391..27804)
DNA (414bp) protein (138aa)
Putative uncharacterized protein id=3865701 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
Putative uncharacterized protein Tax=GWF2_Lentisphaerae_50_93_curated
GWF2_Lentisphaerae_50_93_gwf2_scaffold_2543_23
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists


comp(27916..29247)
DNA (1332bp) protein (444aa)
glyQS; Glycine--tRNA ligase (EC:6.1.1.14) Tax=GWF2_Lentisphaerae_50_93_curated
glyQS; Glycine--tRNA ligase (EC:6.1.1.14)
Glycine--tRNA ligase id=3865703 bin=GWF2_Lentisphaerae_50_93 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
GWF2_Lentisphaerae_50_93_gwf2_scaffold_2543_24
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

29560..29823
DNA (264bp) protein (88aa)
Putative uncharacterized protein id=3865705 bin=GWF2_Lentisphaerae_50_93 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
prevent-host-death family protein Tax=GWF2_Lentisphaerae_50_93_curated
hypothetical protein
GWF2_Lentisphaerae_50_93_gwf2_scaffold_2543_25
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

29827..30276
DNA (450bp) protein (150aa)
SsrA-binding protein id=3865775 bin=GWF2_Lentisphaerae_50_93 species=Natranaerobius thermophilus genus=Natranaerobius taxon_order=Natranaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
SsrA-binding protein; K03664 SsrA-binding protein Tax=GWF2_Lentisphaerae_50_93_curated
SsrA-binding protein
GWF2_Lentisphaerae_50_93_gwf2_scaffold_2543_26
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

30276..30971
DNA (696bp) protein (232aa)
protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77); K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] Tax=GWF2_Lentisphaerae_50_93_curated
protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77)
Protein-L-isoaspartate O-methyltransferase id=3865782 bin=GWF2_Lentisphaerae_50_93 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
GWF2_Lentisphaerae_50_93_gwf2_scaffold_2543_27
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

31214..33439
DNA (2226bp) protein (742aa)
helicase, RecD/TraA family (EC:3.1.11.5); K03581 exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] Tax=GWF2_Lentisphaerae_50_93_curated
helicase, RecD/TraA family (EC:3.1.11.5)
Helicase, RecD/TraA family id=3865786 bin=GWF2_Lentisphaerae_50_93 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
Displaying 28 items

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