ggKbase home page

GWF2_Lentisphaerae_50_93_gwf2_scaffold_1057

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1057_1
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(136..993)
DNA (858bp) protein (286aa)
id=2677196 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
id=2677196 Tax=GWF2_Lentisphaerae_50_93_curated
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1057_2
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(1055..1888)
DNA (834bp) protein (278aa)
id=2677198 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
id=2677198 Tax=GWF2_Lentisphaerae_50_93_curated
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1057_3
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(1890..5252)
DNA (3363bp) protein (1121aa)
Putative uncharacterized protein id=2677199 bin=GWF2_Lentisphaerae_50_93 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
hypothetical protein Tax=GWF2_Lentisphaerae_50_93_curated
hypothetical protein
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1057_4
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(5261..8632)
DNA (3372bp) protein (1124aa)
Putative uncharacterized protein id=2677201 bin=GWF2_Lentisphaerae_50_93 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
hypothetical protein Tax=GWF2_Lentisphaerae_50_93_curated
hypothetical protein
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1057_5
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(8683..9147)
DNA (465bp) protein (155aa)
id=2677370 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
id=2677370 Tax=GWF2_Lentisphaerae_50_93_curated
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1057_6
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(9170..12547)
DNA (3378bp) protein (1126aa)
Putative uncharacterized protein id=2677371 bin=GWF2_Lentisphaerae_50_93 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
Putative uncharacterized protein Tax=GWF2_Lentisphaerae_50_93_curated
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1057_7
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(12593..13531)
DNA (939bp) protein (313aa)
hypothetical protein GobsU_15593 id=2677372 bin=GWF2_Lentisphaerae_50_93 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
hypothetical protein Tax=GWF2_Lentisphaerae_50_93_curated
curli assembly protein CsgG
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1057_8
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(13805..14926)
DNA (1122bp) protein (374aa)
id=2677373 Tax=GWF2_Lentisphaerae_50_93_curated
id=2677373 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1057_9
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(15083..15817)
DNA (735bp) protein (245aa)
id=2677374 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
id=2677374 Tax=GWF2_Lentisphaerae_50_93_curated
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1057_10
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(15804..16055)
DNA (252bp) protein (84aa)
Tax=GWF2_Lentisphaerae_50_93_curated
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1057_11
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(16052..16597)
DNA (546bp) protein (182aa)
RNA polymerase sigma factor RpoE id=2677375 bin=GWF2_Lentisphaerae_50_93 species=Neisseria sp. oral taxon 014 genus=Neisseria taxon_order=Neisseriales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
rpoE; ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWF2_Lentisphaerae_50_93_curated
rpoE; RNA polymerase sigma factor RpoE
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1057_12
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

16717..17988
DNA (1272bp) protein (424aa)
peptidase M48, Ste24p; K06013 STE24 endopeptidase [EC:3.4.24.84] Tax=GWF2_Lentisphaerae_50_93_curated
Endopeptidase id=2677376 bin=GWF2_Lentisphaerae_50_93 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
M48 family peptidase
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1057_13
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

18375..19187
DNA (813bp) protein (271aa)
thymidylate kinase (EC:2.7.4.9); K00943 dTMP kinase [EC:2.7.4.9] Tax=GWF2_Lentisphaerae_50_93_curated
thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase id=2677377 bin=GWF2_Lentisphaerae_50_93 species=Clostridium botulinum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1057_14
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

19162..20214
DNA (1053bp) protein (351aa)
DnaX; DNA polymerase III, gamma/tau subunits; K02341 DNA polymerase III subunit delta' [EC:2.7.7.7] Tax=GWF2_Lentisphaerae_50_93_curated
DNA polymerase III subunits gamma and tau id=2677378 bin=GWF2_Lentisphaerae_50_93 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
DnaX; DNA polymerase III, gamma/tau subunits
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1057_15
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

20252..21058
DNA (807bp) protein (269aa)
Esterase/lipase-like protein id=2677379 bin=GWF2_Lentisphaerae_50_93 species=Paenibacillus lactis genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
esterase/lipase-like protein Tax=GWF2_Lentisphaerae_50_93_curated
esterase/lipase-like protein
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1057_16
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

21121..22308
DNA (1188bp) protein (396aa)
Endoglucanase id=2677380 bin=GWF2_Lentisphaerae_50_93 species=Glaciecola arctica genus=Glaciecola taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
glycoside hydrolase family protein Tax=GWF2_Lentisphaerae_50_93_curated
glycoside hydrolase
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1057_17
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(22672..23727)
DNA (1056bp) protein (352aa)
queA; S-adenosylmethionine--tRNA ribosyltransferase-isomerase; K07568 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:5.-.-.-] Tax=GWF2_Lentisphaerae_50_93_curated
S-adenosylmethionine:tRNA ribosyltransferase-isomerase id=2677381 bin=GWF2_Lentisphaerae_50_93 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
queA; S-adenosylmethionine--tRNA ribosyltransferase-isomerase
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1057_18
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(23690..25216)
DNA (1527bp) protein (509aa)
glycogen/starch synthase (EC:2.4.1.21); K00703 starch synthase [EC:2.4.1.21] Tax=GWF2_Lentisphaerae_50_93_curated
glycogen/starch synthase (EC:2.4.1.21)
Glycogen synthase id=2677382 bin=GWF2_Lentisphaerae_50_93 species=Psychromonas ingrahamii genus=Psychromonas taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1057_19
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(25262..26110)
DNA (849bp) protein (283aa)
Putative uncharacterized protein id=2677383 bin=GWF2_Lentisphaerae_50_93 species=Alloprevotella rava genus=Alloprevotella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
hypothetical protein Tax=GWF2_Lentisphaerae_50_93_curated
hypothetical protein
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1057_20
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(26294..26941)
DNA (648bp) protein (216aa)
Putative uncharacterized protein id=2677384 bin=GWF2_Lentisphaerae_50_93 species=Runella slithyformis genus=Runella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
hypothetical protein Tax=GWF2_Lentisphaerae_50_93_curated
hypothetical protein
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1057_21
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

27067..28320
DNA (1254bp) protein (418aa)
icd; isocitrate dehydrogenase; K00031 isocitrate dehydrogenase [EC:1.1.1.42] Tax=GWF2_Lentisphaerae_50_93_curated
Isocitrate dehydrogenase [NADP] id=2677385 bin=GWF2_Lentisphaerae_50_93 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
icd; isocitrate dehydrogenase
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1057_22
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

28342..29604
DNA (1263bp) protein (421aa)
Cell division protein ftsA id=2677387 bin=GWF2_Lentisphaerae_50_93 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
cell division protein FtsA; K03590 cell division protein FtsA Tax=GWF2_Lentisphaerae_50_93_curated
cell division protein FtsA
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1057_23
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

29627..30793
DNA (1167bp) protein (389aa)
Cell division protein FtsZ id=2677392 bin=GWF2_Lentisphaerae_50_93 species=Pseudanabaena sp. PCC 7367 genus=Pseudanabaena taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
cell division protein FtsZ Tax=GWF2_Lentisphaerae_50_93_curated
cell division protein FtsZ
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1057_24
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

30790..31692
DNA (903bp) protein (301aa)
Peptidase M28 id=2677396 bin=GWF2_Lentisphaerae_50_93 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
putative aminopeptidase Tax=GWF2_Lentisphaerae_50_93_curated
putative aminopeptidase
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1057_25
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

31815..32648
DNA (834bp) protein (278aa)
id=2677398 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
id=2677398 Tax=GWF2_Lentisphaerae_50_93_curated
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1057_26
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

32693..33985
DNA (1293bp) protein (431aa)
NupC id=2677399 bin=GWF2_Lentisphaerae_50_93 species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
nupC; protein NupC; K03317 concentrative nucleoside transporter, CNT family Tax=GWF2_Lentisphaerae_50_93_curated
nupC; protein NupC
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1057_27
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

34049..34855
DNA (807bp) protein (269aa)
dapF; diaminopimelate epimerase (EC:5.1.1.7); K01778 diaminopimelate epimerase [EC:5.1.1.7] Tax=GWF2_Lentisphaerae_50_93_curated
dapF; diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase id=2677402 bin=GWF2_Lentisphaerae_50_93 species=Hydrogenivirga sp. 128-5-R1-1 genus=Hydrogenivirga taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1057_28
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

34870..35736
DNA (867bp) protein (289aa)
dapA; dihydrodipicolinate synthase/N-acetylneuraminate lyase; K01714 dihydrodipicolinate synthase [EC:4.2.1.52] Tax=GWF2_Lentisphaerae_50_93_curated
Dihydrodipicolinate synthase id=2677408 bin=GWF2_Lentisphaerae_50_93 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
dapA; dihydrodipicolinate synthase/N-acetylneuraminate lyase
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1057_29
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

35809..36369
DNA (561bp) protein (187aa)
id=2677413 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
id=2677413 Tax=GWF2_Lentisphaerae_50_93_curated
GWF2_Lentisphaerae_50_93_gwf2_scaffold_1057_30
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

36366..36953
DNA (588bp) protein (196aa)
Protein serine/threonine/tyrosine phosphatase, putative id=2677414 bin=GWF2_Lentisphaerae_50_93 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
hypothetical protein Tax=GWF2_Lentisphaerae_50_93_curated
protein serine/threonine/tyrosine phosphatase
Displaying items 1-30 of 36 in total

View Taxonomy