ggKbase home page

GWF2_Lentisphaerae_50_93_gwf2_scaffold_946

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF2_Lentisphaerae_50_93_gwf2_scaffold_946_1
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

2..91
DNA (90bp) protein (30aa)
id=3204256 bin=GWF2_Lentisphaerae_49_21 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
id=3204256 Tax=GWF2_Lentisphaerae_50_93_curated
GWF2_Lentisphaerae_50_93_gwf2_scaffold_946_2
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(440..1537)
DNA (1098bp) protein (366aa)
rfe; UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase; K01000 phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] Tax=GWF2_Lentisphaerae_
Phospho-N-acetylmuramoyl-pentapeptide-transferase id=4642586 bin=GWF2_Lentisphaerae_50_93 species=Methylacidiphilum infernorum genus=Methylacidiphilum taxon_order=Methylacidiphilales taxon_class=unknown phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
rfe; UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase
GWF2_Lentisphaerae_50_93_gwf2_scaffold_946_3
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(1596..3908)
DNA (2313bp) protein (771aa)
nrdJ1; ribonucleoside-diphosphate reductase NrdJ (EC:1.17.4.1); K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] Tax=GWF2_Lentisphaerae_50_93_curated
vitamin B12-dependent ribonucleoside-diphosphate reductase (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase id=4642587 bin=GWF2_Lentisphaerae_50_93 species=Ruegeria lacuscaerulensis genus=Ruegeria taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
GWF2_Lentisphaerae_50_93_gwf2_scaffold_946_4
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(4203..5735)
DNA (1533bp) protein (511aa)
Hypothetical membrane protein id=4642588 bin=GWF2_Lentisphaerae_50_93 species=Caldisericum exile genus=Caldisericum taxon_order=Caldisericales taxon_class=Caldisericia phylum=Caldiserica tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
membrane protein Tax=GWF2_Lentisphaerae_50_93_curated
membrane protein
GWF2_Lentisphaerae_50_93_gwf2_scaffold_946_5
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(5739..6686)
DNA (948bp) protein (316aa)
id=4642589 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
id=4642589 Tax=GWF2_Lentisphaerae_50_93_curated
GWF2_Lentisphaerae_50_93_gwf2_scaffold_946_6
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(6843..7115)
DNA (273bp) protein (91aa)
id=4642590 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
id=4642590 Tax=GWF2_Lentisphaerae_50_93_curated
GWF2_Lentisphaerae_50_93_gwf2_scaffold_946_7
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

7394..20413
DNA (13020bp) protein (4340aa)
RCC1 repeat-containing protein id=4642591 bin=GWF2_Lentisphaerae_50_93 species=Myxococcus fulvus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
RCC1 repeat-containing protein Tax=GWF2_Lentisphaerae_50_93_curated
RCC1 repeat-containing protein
GWF2_Lentisphaerae_50_93_gwf2_scaffold_946_8
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

20432..27232
DNA (6801bp) protein (2267aa)
hypothetical protein Tax=GWF2_Lentisphaerae_50_93_curated
YD repeat protein id=4642592 bin=GWF2_Lentisphaerae_50_93 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
type IV secretion protein Rhs
GWF2_Lentisphaerae_50_93_gwf2_scaffold_946_9
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

28032..28745
DNA (714bp) protein (238aa)
id=4642594 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
id=4642594 Tax=GWF2_Lentisphaerae_50_93_curated
GWF2_Lentisphaerae_50_93_gwf2_scaffold_946_10
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

28767..29000
DNA (234bp) protein (78aa)
Tax=GWF2_Lentisphaerae_50_93_curated
GWF2_Lentisphaerae_50_93_gwf2_scaffold_946_11
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

29179..29586
DNA (408bp) protein (136aa)
Putative uncharacterized protein id=4642596 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
Putative uncharacterized protein Tax=GWF2_Lentisphaerae_50_93_curated
GWF2_Lentisphaerae_50_93_gwf2_scaffold_946_12
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(30209..30553)
DNA (345bp) protein (115aa)
id=4642597 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
id=4642597 Tax=GWF2_Lentisphaerae_50_93_curated
GWF2_Lentisphaerae_50_93_gwf2_scaffold_946_13
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(30555..31118)
DNA (564bp) protein (188aa)
id=4642598 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
id=4642598 Tax=GWF2_Lentisphaerae_50_93_curated
GWF2_Lentisphaerae_50_93_gwf2_scaffold_946_14
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

31403..33352
DNA (1950bp) protein (650aa)
dnaG; DNA primase Tax=GWF2_Lentisphaerae_50_93_curated
DNA primase id=4642599 bin=GWF2_Lentisphaerae_50_93 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
dnaG; DNA primase
GWF2_Lentisphaerae_50_93_gwf2_scaffold_946_15
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

33507..34424
DNA (918bp) protein (306aa)
Site-specific DNA tyrosine recombinase id=4642600 bin=GWF2_Lentisphaerae_50_93 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
xerD; site-specific tyrosine recombinase XerD-family; K04763 integrase/recombinase XerD Tax=GWF2_Lentisphaerae_50_93_curated
xerD; site-specific recombinase XerD
GWF2_Lentisphaerae_50_93_gwf2_scaffold_946_16
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

34421..35341
DNA (921bp) protein (307aa)
Tyrosine recombinase XerD id=4642601 bin=GWF2_Lentisphaerae_50_93 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
tyrosine recombinase XerD; K04763 integrase/recombinase XerD Tax=GWF2_Lentisphaerae_50_93_curated
tyrosine recombinase XerD
GWF2_Lentisphaerae_50_93_gwf2_scaffold_946_17
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

35350..36966
DNA (1617bp) protein (539aa)
YD repeat-containing protein Tax=GWF2_Lentisphaerae_50_93_curated
RHS repeat-associated core domain protein id=4642602 bin=GWF2_Lentisphaerae_50_93 species=Opitutaceae bacterium TAV5 genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
type IV secretion protein Rhs
GWF2_Lentisphaerae_50_93_gwf2_scaffold_946_18
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

36981..37973
DNA (993bp) protein (331aa)
id=4642603 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
id=4642603 Tax=GWF2_Lentisphaerae_50_93_curated
GWF2_Lentisphaerae_50_93_gwf2_scaffold_946_19
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

38054..38536
DNA (483bp) protein (161aa)
id=4642604 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
id=4642604 Tax=GWF2_Lentisphaerae_50_93_curated
GWF2_Lentisphaerae_50_93_gwf2_scaffold_946_20
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

38835..40127
DNA (1293bp) protein (431aa)
Putative uncharacterized protein id=4642605 bin=GWF2_Lentisphaerae_50_93 species=Chlorobium chlorochromatii genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
hypothetical protein Tax=GWF2_Lentisphaerae_50_93_curated
hypothetical protein rbh
GWF2_Lentisphaerae_50_93_gwf2_scaffold_946_21
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(40450..40638)
DNA (189bp) protein (63aa)
IS66 family transposase truncated id=4642606 bin=GWF2_Lentisphaerae_50_93 species=Myxococcus fulvus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
IS66 family transposase truncated Tax=GWF2_Lentisphaerae_50_93_curated
IS66 family transposase truncated
GWF2_Lentisphaerae_50_93_gwf2_scaffold_946_22
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

40951..46110
DNA (5160bp) protein (1720aa)
Cell surface protein id=4642608 bin=GWF2_Lentisphaerae_50_93 species=Methanosarcina acetivorans genus=Methanosarcina taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
cell surface protein Tax=GWF2_Lentisphaerae_50_93_curated
cell surface protein
GWF2_Lentisphaerae_50_93_gwf2_scaffold_946_23
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

46298..46813
DNA (516bp) protein (172aa)
id=4642609 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
id=4642609 Tax=GWF2_Lentisphaerae_50_93_curated
Displaying 23 items

View Taxonomy