ggKbase home page

GWF2_NC10X_70_14_gwf2_scaffold_5106

Search features with annotation key words

Displaying items 1-30 of 31 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF2_NC10X_70_14_gwf2_scaffold_5106_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(3..437)
DNA (435bp) protein (145aa)
acd12; hypothetical protein (EC:1.3.99.-) Tax=GWA2_Rokubacteria_70_23_curated
acyl-CoA dehydrogenase (EC:1.3.99.2)
Putative acyl-CoA dehydrogenase id=4287899 bin=GWF2_Methylomirabilis_70_14 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
GWF2_NC10X_70_14_gwf2_scaffold_5106_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

642..863
DNA (222bp) protein (74aa)
Methylmalonyl-CoA decarboxylase, gamma subunit id=4287901 bin=GWF2_Methylomirabilis_70_14 species=Veillonella sp. oral taxon 780 genus=Veillonella taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
methylmalonyl-CoA decarboxylase, subunit gamma Tax=GWA2_Rokubacteria_70_23_curated
methylmalonyl-CoA decarboxylase, subunit gamma
GWF2_NC10X_70_14_gwf2_scaffold_5106_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

879..1058
DNA (180bp) protein (60aa)
id=4767917 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
id=4767917 Tax=GWA2_Rokubacteria_70_23_curated
GWF2_NC10X_70_14_gwf2_scaffold_5106_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

1051..2187
DNA (1137bp) protein (379aa)
mmdB; putative methylmalonyl-CoA decarboxylase beta-subunit (EC:4.1.1.41); K01572 oxaloacetate decarboxylase, beta subunit [EC:4.1.1.3] Tax=GWA2_Rokubacteria_70_23_curated
mmdB; putative methylmalonyl-CoA decarboxylase beta-subunit (EC:4.1.1.41)
Putative methylmalonyl-CoA decarboxylase beta-subunit id=4287903 bin=GWF2_Methylomirabilis_70_14 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
GWF2_NC10X_70_14_gwf2_scaffold_5106_5
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

2226..2453
DNA (228bp) protein (76aa)
Major facilitator superfamily protein id=4767883 bin=GWC2_Methylomirabilis_70_24 species=Afipia broomeae genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
major facilitator superfamily protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
GWF2_NC10X_70_14_gwf2_scaffold_5106_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(2432..2818)
DNA (387bp) protein (129aa)
Glyoxalase/bleomycin resistance protein/dioxygenase id=4767881 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
dioxygenase Tax=GWA2_Rokubacteria_70_23_curated
dioxygenase
GWF2_NC10X_70_14_gwf2_scaffold_5106_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

2844..4076
DNA (1233bp) protein (411aa)
Fosmidomycin resistance protein id=4287908 bin=GWF2_Methylomirabilis_70_14 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
fosmidomycin resistance protein; K08223 MFS transporter, FSR family, fosmidomycin resistance protein Tax=GWA2_Rokubacteria_70_23_curated
fosmidomycin resistance protein
GWF2_NC10X_70_14_gwf2_scaffold_5106_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

4069..4914
DNA (846bp) protein (282aa)
tRNA (adenine-N(1)-)-methyltransferase (EC:2.1.1.36); K07442 tRNA (adenine57-N1/adenine58-N1)-methyltransferase [EC:2.1.1.219 2.1.1.220] Tax=GWA2_Rokubacteria_70_23_curated
tRNA (Adenine-N(1)-)-methyltransferase id=4287911 bin=GWF2_Methylomirabilis_70_14 species=Dictyoglomus turgidum genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
tRNA (adenine-N(1)-)-methyltransferase
GWF2_NC10X_70_14_gwf2_scaffold_5106_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

5020..6933
DNA (1914bp) protein (638aa)
peptidyl-prolyl cis-trans isomerase; K03770 peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] Tax=GWA2_Rokubacteria_70_23_curated
PpiC-type peptidyl-prolyl cis-trans isomerase id=4767875 bin=GWC2_Methylomirabilis_70_24 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
GWF2_NC10X_70_14_gwf2_scaffold_5106_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

7162..7716
DNA (555bp) protein (185aa)
Isochorismatase hydrolase id=4767873 bin=GWC2_Methylomirabilis_70_24 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
isochorismatase hydrolase Tax=GWA2_Rokubacteria_70_23_curated
isochorismatase hydrolase
GWF2_NC10X_70_14_gwf2_scaffold_5106_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

7791..9068
DNA (1278bp) protein (426aa)
ATPase id=4288028 bin=GWF2_Methylomirabilis_70_14 species=Thermus thermophilus genus=Thermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative GTP-binding protein; K07133 Tax=GWA2_Rokubacteria_70_23_curated
putative GTP-binding protein
GWF2_NC10X_70_14_gwf2_scaffold_5106_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(9525..10727)
DNA (1203bp) protein (401aa)
Major facilitator superfamily MFS_1 id=4288029 bin=GWF2_Methylomirabilis_70_14 species=Streptomyces rimosus genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
major facilitator superfamily protein Tax=GWA2_Rokubacteria_70_23_curated
major facilitator superfamily protein
GWF2_NC10X_70_14_gwf2_scaffold_5106_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(10782..14114)
DNA (3333bp) protein (1111aa)
Acriflavin resistance protein id=4288031 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
GWF2_NC10X_70_14_gwf2_scaffold_5106_14
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(14114..15436)
DNA (1323bp) protein (441aa)
Putative Macrolide-specific efflux protein macA id=4288033 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Macrolide-specific efflux protein macA Tax=GWA2_Rokubacteria_70_23_curated
Macrolide-specific efflux protein macA
GWF2_NC10X_70_14_gwf2_scaffold_5106_15
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

15516..16013
DNA (498bp) protein (166aa)
Transcription elongation factor GreA id=4288035 bin=GWF2_Methylomirabilis_70_14 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
transcription elongation factor GreA; K03624 transcription elongation factor GreA Tax=GWA2_Rokubacteria_70_23_curated
transcription elongation factor GreA
GWF2_NC10X_70_14_gwf2_scaffold_5106_16
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(16024..17151)
DNA (1128bp) protein (376aa)
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
Putative uncharacterized protein id=3635561 bin=GWC2_Methylomirabilis_70_16 species=Nostoc punctiforme genus=Nostoc taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
GWF2_NC10X_70_14_gwf2_scaffold_5106_17
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(17599..18162)
DNA (564bp) protein (188aa)
Putative uncharacterized protein id=4288038 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
GWF2_NC10X_70_14_gwf2_scaffold_5106_18
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(18186..18890)
DNA (705bp) protein (235aa)
ABC transporter related id=4387953 bin=GWC2_Methylomirabilis_70_24 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
LivF; ABC-type branched-chain amino acid transport systems, ATPase component; K01996 branched-chain amino acid transport system ATP-binding protein Tax=GWA2_Rokubacteria_70_23_curated
LivF; ABC-type branched-chain amino acid transport systems, ATPase component
GWF2_NC10X_70_14_gwf2_scaffold_5106_19
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(18890..19510)
DNA (621bp) protein (207aa)
D-hydantoinase id=4387955 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Lyngbya taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
isochorismatase Tax=GWA2_Rokubacteria_70_23_curated
isochorismatase
GWF2_NC10X_70_14_gwf2_scaffold_5106_20
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(19507..21018)
DNA (1512bp) protein (504aa)
Allantoinase id=4288045 bin=GWF2_Methylomirabilis_70_14 species=Fischerella sp. JSC-11 genus=Fischerella taxon_order=Stigonematales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
dihydroorotase-like cyclic amidohydrolase Tax=GWA2_Rokubacteria_70_23_curated
dihydroorotase-like cyclic amidohydrolase
GWF2_NC10X_70_14_gwf2_scaffold_5106_21
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(21020..21751)
DNA (732bp) protein (244aa)
ABC transporter ATP-binding protein id=4387959 bin=GWC2_Methylomirabilis_70_24 species=Azospirillum brasilense genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
ABC transporter ATP-binding protein Tax=GWA2_Rokubacteria_70_23_curated
ABC transporter ATP-binding protein
GWF2_NC10X_70_14_gwf2_scaffold_5106_22
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(21754..22713)
DNA (960bp) protein (320aa)
Putative branched-chain amino acid ABC transporter (Permease protein); livM-like protein id=4387961 bin=GWC2_Methylomirabilis_70_24 species=Polymorphum gilvum genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
branched-chain amino acid ABC transporter permease; K01998 branched-chain amino acid transport system permease protein Tax=GWA2_Rokubacteria_70_23_curated
branched-chain amino acid ABC transporter permease
GWF2_NC10X_70_14_gwf2_scaffold_5106_23
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(22706..23578)
DNA (873bp) protein (291aa)
Inner-membrane translocator id=4387964 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein Tax=GWA2_Rokubacteria_70_23_curated
branched-chain amino acid ABC transporter permease
GWF2_NC10X_70_14_gwf2_scaffold_5106_24
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(23912..25096)
DNA (1185bp) protein (395aa)
ABC-type branched-chain amino acid transport system, periplasmic component id=4288054 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
extracellular ligand-binding receptor Tax=GWA2_Rokubacteria_70_23_curated
extracellular ligand-binding receptor
GWF2_NC10X_70_14_gwf2_scaffold_5106_25
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

25333..25785
DNA (453bp) protein (151aa)
Acyl dehydratase id=4288058 bin=GWF2_Methylomirabilis_70_14 species=Bacillus bataviensis genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
MaoC domain-containing protein dehydratase Tax=GWA2_Rokubacteria_70_23_curated
MaoC-like protein dehydratase
GWF2_NC10X_70_14_gwf2_scaffold_5106_26
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

25789..26673
DNA (885bp) protein (295aa)
Citryl-CoA lyase id=3209651 bin=GWC2_Methylomirabilis_70_24 species=Mesorhizobium opportunistum genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
citrate lyase beta subunit Tax=GWA2_Rokubacteria_70_23_curated
citrate lyase beta subunit
GWF2_NC10X_70_14_gwf2_scaffold_5106_27
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

26774..27955
DNA (1182bp) protein (394aa)
ABC-type branched-chain amino acid transport system, periplasmic component id=4288064 bin=GWF2_Methylomirabilis_70_14 species=Idiomarina sp. A28L genus=Idiomarina taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
livK; branched-chain amino acid ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein Tax=GWA2_Rokubacteria_70_23_curated
branched-chain amino acid ABC transporter substrate-binding protein
GWF2_NC10X_70_14_gwf2_scaffold_5106_28
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

28033..28911
DNA (879bp) protein (293aa)
Inner-membrane translocator id=4288067 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein Tax=GWA2_Rokubacteria_70_23_curated
inner-membrane translocator
GWF2_NC10X_70_14_gwf2_scaffold_5106_29
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

28908..29831
DNA (924bp) protein (308aa)
ABC-type transport system permease protein II (Probable substrates branched-chain/neutral amino acids) 2 id=4288070 bin=GWF2_Methylomirabilis_70_14 species=Marinobacter sp. ELB17 genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
high-affinity branched-chain amino acid transporter membrane protein Tax=GWA2_Rokubacteria_70_23_curated
Branched-chain amino acid transport system permease protein LivM
GWF2_NC10X_70_14_gwf2_scaffold_5106_30
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

29831..30535
DNA (705bp) protein (235aa)
ABC transport system protein id=3209647 bin=GWC2_Methylomirabilis_70_24 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
livG; leucine/isoleucine/valine transporter subunit ; ATP-binding component of ABC superfamily Tax=GWA2_Rokubacteria_70_23_curated
livG; ABC-type branched-chain amino acid transport systems, ATP-binding protein I
Displaying items 1-30 of 31 in total

View Taxonomy