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GWF2_NC10X_70_14_gwf2_scaffold_2218

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Displaying items 1-30 of 33 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF2_NC10X_70_14_gwf2_scaffold_2218_1
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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46..399
DNA (354bp) protein (118aa)
Putative uncharacterized protein id=3775388 bin=GWF2_Methylomirabilis_70_14 species=Oscillatoria nigro-viridis genus=Oscillatoria taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=RBG_13_Deltaproteobacteria_47_9_curated
hypothetical protein
GWF2_NC10X_70_14_gwf2_scaffold_2218_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(1148..2125)
DNA (978bp) protein (326aa)
TRAP transporter solute receptor, TAXI family id=3775391 bin=GWF2_Methylomirabilis_70_14 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
TRAP transporter solute receptor, TAXI family; K07080 Tax=GWA2_Rokubacteria_70_23_curated
TRAP transporter solute receptor, TAXI family
GWF2_NC10X_70_14_gwf2_scaffold_2218_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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2267..4375
DNA (2109bp) protein (703aa)
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9); K01473 N-methylhydantoinase A [EC:3.5.2.14] Tax=GWA2_Rokubacteria_70_23_curated
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9)
5-oxoprolinase (ATP-hydrolyzing) id=4771369 bin=GWC2_Methylomirabilis_70_24 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
GWF2_NC10X_70_14_gwf2_scaffold_2218_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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4375..5187
DNA (813bp) protein (271aa)
Methyltransferase domain protein id=3775395 bin=GWF2_Methylomirabilis_70_14 species=Paenibacillus sp. HGF7 genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
type 12 methyltransferase Tax=GWA2_Rokubacteria_70_23_curated
methyltransferase type 12
GWF2_NC10X_70_14_gwf2_scaffold_2218_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

5193..7112
DNA (1920bp) protein (640aa)
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9); K01474 N-methylhydantoinase B [EC:3.5.2.14] Tax=GWA2_Rokubacteria_70_23_curated
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9)
5-oxoprolinase (ATP-hydrolyzing) id=3775397 bin=GWF2_Methylomirabilis_70_14 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
GWF2_NC10X_70_14_gwf2_scaffold_2218_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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7220..7993
DNA (774bp) protein (258aa)
Alpha/beta hydrolase fold protein id=3775399 bin=GWF2_Methylomirabilis_70_14 species=Granulicella mallensis genus=Granulicella taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
alpha/beta hydrolase fold protein Tax=GWA2_Rokubacteria_70_23_curated
alpha/beta hydrolase fold protein
GWF2_NC10X_70_14_gwf2_scaffold_2218_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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8466..9746
DNA (1281bp) protein (427aa)
Probable Leu/Ile/Val-binding protein id=3775401 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Pelagibacter ubique genus=Candidatus Pelagibacter taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
braC; Leu/Ile/Val-binding protein Tax=GWA2_Rokubacteria_70_23_curated
braC; Leu/Ile/Val-binding protein
GWF2_NC10X_70_14_gwf2_scaffold_2218_8
unknown

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9950..10156
DNA (207bp) protein (69aa)

This feature has no annotations

GWF2_NC10X_70_14_gwf2_scaffold_2218_9
BJP_IG2069_Syntrophobacterales_47_18, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(10093..11286)
DNA (1194bp) protein (398aa)
Major facilitator superfamily MFS_1 id=3775403 bin=GWF2_Methylomirabilis_70_14 species=Desulfotomaculum hydrothermale genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
major facilitator superfamily protein
Tax=BJP_IG2069_Syntrophobacterales_47_18
GWF2_NC10X_70_14_gwf2_scaffold_2218_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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11546..12412
DNA (867bp) protein (289aa)
Branched-chain amino acid transport protein id=3775469 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Pelagibacter ubique genus=Candidatus Pelagibacter taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
braD; branched chain amino acid ABC transporter; K01997 branched-chain amino acid transport system permease protein Tax=GWA2_Rokubacteria_70_23_curated
braD; branched chain amino acid ABC transporter
GWF2_NC10X_70_14_gwf2_scaffold_2218_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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12412..13374
DNA (963bp) protein (321aa)
Inner-membrane translocator id=4771378 bin=GWC2_Methylomirabilis_70_24 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein Tax=GWA2_Rokubacteria_70_23_curated
inner-membrane translocator
GWF2_NC10X_70_14_gwf2_scaffold_2218_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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13375..14100
DNA (726bp) protein (242aa)
LivG-like protein id=3775474 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Pelagibacter ubique genus=Candidatus Pelagibacter taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
LivG-like protein; K01995 branched-chain amino acid transport system ATP-binding protein Tax=GWA2_Rokubacteria_70_23_curated
LivG-like protein
GWF2_NC10X_70_14_gwf2_scaffold_2218_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

14109..14816
DNA (708bp) protein (236aa)
Probable high-affinity branched-chain amino acid transport ATP-binding protein id=4771380 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Pelagibacter ubique genus=Candidatus Pelagibacter taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
braG; high-affinity branched-chain amino acid transport ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein Tax=GWA2_Rokubacteria_70_23_curated
braG; high-affinity branched-chain amino acid transport ATP-binding protein
GWF2_NC10X_70_14_gwf2_scaffold_2218_14
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

14885..15064
DNA (180bp) protein (60aa)
id=4771381 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
id=4771381 Tax=GWA2_Rokubacteria_70_23_curated
GWF2_NC10X_70_14_gwf2_scaffold_2218_15
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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15040..15366
DNA (327bp) protein (109aa)
Thioredoxin id=4771382 bin=GWC2_Methylomirabilis_70_24 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
trx; thioredoxin; K03671 thioredoxin 1 Tax=GWA2_Rokubacteria_70_23_curated
trx; thioredoxin
GWF2_NC10X_70_14_gwf2_scaffold_2218_16
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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15378..16916
DNA (1539bp) protein (513aa)
anthranilate synthase component I (EC:4.1.3.27); K01657 anthranilate synthase component I [EC:4.1.3.27] Tax=GWA2_Rokubacteria_70_23_curated
anthranilate synthase component I (EC:4.1.3.27)
Fragment of Anthranilate synthase id=4771383 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
GWF2_NC10X_70_14_gwf2_scaffold_2218_17
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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16913..17494
DNA (582bp) protein (194aa)
glutamine amidotransferase of anthranilate synthase; K01658 anthranilate synthase component II [EC:4.1.3.27] Tax=GWA2_Rokubacteria_70_23_curated
Glutamine amidotransferase of anthranilate synthase id=3775487 bin=GWF2_Methylomirabilis_70_14 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glutamine amidotransferase of anthranilate synthase
GWF2_NC10X_70_14_gwf2_scaffold_2218_18
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

17559..18569
DNA (1011bp) protein (337aa)
thiamine-monophosphate kinase (EC:2.7.4.16); K00946 thiamine-monophosphate kinase [EC:2.7.4.16] Tax=GWA2_Rokubacteria_70_23_curated
Thiamine-monophosphate kinase id=3775490 bin=GWF2_Methylomirabilis_70_14 species=Heliobacterium modesticaldum genus=Heliobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
thiL; thiamine-monophosphate kinase
GWF2_NC10X_70_14_gwf2_scaffold_2218_19
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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18562..19839
DNA (1278bp) protein (426aa)
Putative uncharacterized protein id=4771412 bin=GWC2_Methylomirabilis_70_24 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
GWF2_NC10X_70_14_gwf2_scaffold_2218_20
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

19836..21080
DNA (1245bp) protein (415aa)
Putative uncharacterized protein id=3775497 bin=GWF2_Methylomirabilis_70_14 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
GWF2_NC10X_70_14_gwf2_scaffold_2218_21
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

21448..22122
DNA (675bp) protein (225aa)
dienelactone hydrolase-like enzyme (EC:3.1.1.45); K01061 carboxymethylenebutenolidase [EC:3.1.1.45] Tax=GWA2_Rokubacteria_70_23_curated
dienelactone hydrolase-like enzyme (EC:3.1.1.45)
Dienelactone hydrolase-like enzyme id=4771414 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
GWF2_NC10X_70_14_gwf2_scaffold_2218_22
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

22201..22437
DNA (237bp) protein (79aa)
Putative uncharacterized protein id=4771415 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Putative uncharacterized protein Tax=GWA2_Rokubacteria_70_23_curated
GWF2_NC10X_70_14_gwf2_scaffold_2218_23
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

22484..22879
DNA (396bp) protein (132aa)
id=4771416 Tax=GWA2_Rokubacteria_70_23_curated
id=4771416 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
GWF2_NC10X_70_14_gwf2_scaffold_2218_24
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(22978..23451)
DNA (474bp) protein (158aa)
50S ribosomal protein L17 id=3775509 bin=GWF2_Methylomirabilis_70_14 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rplQ; 50S ribosomal protein L17; K02879 large subunit ribosomal protein L17 Tax=GWA2_Rokubacteria_70_23_curated
rplQ; 50S ribosomal protein L17
GWF2_NC10X_70_14_gwf2_scaffold_2218_25
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(23448..24434)
DNA (987bp) protein (329aa)
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=GWA2_Rokubacteria_70_23_curated
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha id=3775512 bin=GWF2_Methylomirabilis_70_14 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
GWF2_NC10X_70_14_gwf2_scaffold_2218_26
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists


comp(24441..25064)
DNA (624bp) protein (208aa)
30S ribosomal protein S4 id=3775515 bin=GWF2_Methylomirabilis_70_14 species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rpsD; 30S ribosomal protein S4 Tax=GWA2_Rokubacteria_70_23_curated
rpsD; 30S ribosomal protein S4
GWF2_NC10X_70_14_gwf2_scaffold_2218_27
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists


comp(25077..25490)
DNA (414bp) protein (138aa)
Ribosomal protein S11 id=3775518 bin=GWF2_Methylomirabilis_70_14 species=Alicyclobacillus acidocaldarius genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 Tax=GWA2_Rokubacteria_70_23_curated
rpsK; 30S ribosomal protein S11
GWF2_NC10X_70_14_gwf2_scaffold_2218_28
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists


comp(25503..25907)
DNA (405bp) protein (135aa)
30S ribosomal protein S13 id=3775521 bin=GWF2_Methylomirabilis_70_14 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=GWA2_Rokubacteria_70_23_curated
30S ribosomal protein S13
GWF2_NC10X_70_14_gwf2_scaffold_2218_29
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(25962..26075)
DNA (114bp) protein (38aa)
Translation initiation factor IF-1 id=4799394 bin=GWC2_Methylomirabilis_70_24 species=Natranaerobius thermophilus genus=Natranaerobius taxon_order=Natranaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
50S ribosomal protein L36P; K02919 large subunit ribosomal protein L36 Tax=GWA2_Rokubacteria_70_23_curated
50S ribosomal protein L36P
GWF2_NC10X_70_14_gwf2_scaffold_2218_30
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(26088..26306)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 id=3775528 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
infA; translation initiation factor IF-1; K02518 translation initiation factor IF-1 Tax=GWA2_Rokubacteria_70_23_curated
infA; translation initiation factor IF-1
Displaying items 1-30 of 33 in total

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