ggKbase home page

GWF2_NC10X_70_14_gwf2_scaffold_5595

Search features with annotation key words

Displaying 23 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF2_NC10X_70_14_gwf2_scaffold_5595_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(70..1824)
DNA (1755bp) protein (585aa)
phospholipid-lipopolysaccharide ABC transporter; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] Tax=GWA2_Rokubacteria_70_23_curated
Lipid A export ATP-binding/permease protein MsbA id=4554908 bin=GWC2_Methylomirabilis_70_24 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
phospholipid-lipopolysaccharide ABC transporter
GWF2_NC10X_70_14_gwf2_scaffold_5595_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(1821..2927)
DNA (1107bp) protein (369aa)
Glycosyl transferase, group 1 id=4334274 bin=GWF2_Methylomirabilis_70_14 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
group 1 glycosyl transferase Tax=GWA2_Rokubacteria_70_23_curated
group 1 glycosyl transferase
GWF2_NC10X_70_14_gwf2_scaffold_5595_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(2927..4006)
DNA (1080bp) protein (360aa)
glutamine--scyllo-inositol transaminase (EC:2.6.1.50) Tax=GWA2_Rokubacteria_70_23_curated
glutamine--scyllo-inositol transaminase (EC:2.6.1.50)
DegT/DnrJ/EryC1/StrS aminotransferase id=4334275 bin=GWF2_Methylomirabilis_70_14 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
GWF2_NC10X_70_14_gwf2_scaffold_5595_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(4006..4464)
DNA (459bp) protein (153aa)
Putative oxidoreductase id=4334276 bin=GWF2_Methylomirabilis_70_14 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative oxidoreductase Tax=GWA2_Rokubacteria_70_23_curated
putative oxidoreductase
GWF2_NC10X_70_14_gwf2_scaffold_5595_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

4644..5753
DNA (1110bp) protein (370aa)
Mrp id=4554975 bin=GWC2_Methylomirabilis_70_24 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein; K03593 ATP-binding protein involved in chromosome partitioning Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
GWF2_NC10X_70_14_gwf2_scaffold_5595_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

5770..6405
DNA (636bp) protein (212aa)
ATP-dependent protease La id=4334329 bin=GWF2_Methylomirabilis_70_14 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
lon3; ATP-dependent protease La; K07157 Tax=GWA2_Rokubacteria_70_23_curated
lon3; ATP-dependent protease La
GWF2_NC10X_70_14_gwf2_scaffold_5595_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

6409..6891
DNA (483bp) protein (161aa)
protease Do (EC:3.4.21.108); K01362 [EC:3.4.21.-] Tax=GWA2_Rokubacteria_70_23_curated
Periplasmic trypsin-like serine protease protein id=4334330 bin=GWF2_Methylomirabilis_70_14 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
serine protease
GWF2_NC10X_70_14_gwf2_scaffold_5595_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

6888..7097
DNA (210bp) protein (70aa)
protease Do (EC:3.4.21.108); K01362 [EC:3.4.21.-] Tax=GWA2_Rokubacteria_70_23_curated
Protein kinase id=4334331 bin=GWF2_Methylomirabilis_70_14 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
GWF2_NC10X_70_14_gwf2_scaffold_5595_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

7914..9038
DNA (1125bp) protein (375aa)
Putative substrate-binding component of transporter id=4334332 bin=GWF2_Methylomirabilis_70_14 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
GWF2_NC10X_70_14_gwf2_scaffold_5595_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

9153..9761
DNA (609bp) protein (203aa)
TRAP-type mannitol/chloroaromatic compound transport system, small permease component id=4334333 bin=GWF2_Methylomirabilis_70_14 species=Bradyrhizobium sp. CCGE-LA001 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative transporter dctQ related transmembrane protein Tax=GWA2_Rokubacteria_70_23_curated
TRAP dicarboxylate transporter protein DctQ subunit
GWF2_NC10X_70_14_gwf2_scaffold_5595_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

10154..11113
DNA (960bp) protein (320aa)
Trap-type mannitol/chloroaromatic compound transport system, large permease component id=4334334 bin=GWF2_Methylomirabilis_70_14 species=Bradyrhizobium sp. CCGE-LA001 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
TRAP dicarboxylate transporter subunit DctM Tax=GWA2_Rokubacteria_70_23_curated
TRAP dicarboxylate transporter subunit DctM
GWF2_NC10X_70_14_gwf2_scaffold_5595_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

11148..12551
DNA (1404bp) protein (468aa)
Amidase id=4334335 bin=GWF2_Methylomirabilis_70_14 species=Bradyrhizobium sp. CCGE-LA001 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amidase Tax=GWA2_Rokubacteria_70_23_curated
amidase
GWF2_NC10X_70_14_gwf2_scaffold_5595_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

12548..12724
DNA (177bp) protein (59aa)
id=4334336 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
id=4334336 Tax=GWA2_Rokubacteria_70_23_curated
GWF2_NC10X_70_14_gwf2_scaffold_5595_14
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

12767..12988
DNA (222bp) protein (74aa)
2-alkenal reductase (EC:1.3.1.74) Tax=GWA2_Rokubacteria_70_23_curated
2-alkenal reductase (EC:1.3.1.74)
2-alkenal reductase id=4334337 bin=GWF2_Methylomirabilis_70_14 species=Rhodobacter sphaeroides genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
GWF2_NC10X_70_14_gwf2_scaffold_5595_15
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

13166..13330
DNA (165bp) protein (55aa)
Putative regulatory protein, FmdB family id=4334338 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
FmdB family regulatory protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
GWF2_NC10X_70_14_gwf2_scaffold_5595_16
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

13347..13874
DNA (528bp) protein (176aa)
Pfpi family intracellular protease; K05520 protease I [EC:3.2.-.-] Tax=GWA2_Rokubacteria_70_23_curated
Intracellular protease, PfpI family id=4334339 bin=GWF2_Methylomirabilis_70_14 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Pfpi family intracellular protease
GWF2_NC10X_70_14_gwf2_scaffold_5595_17
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

13897..15669
DNA (1773bp) protein (591aa)
Carbamoyl transferase id=4334340 bin=GWF2_Methylomirabilis_70_14 species=PER_GWF2_39_17 genus=PER_GWF2_39_17 taxon_order=PER_GWF2_39_17 taxon_class=PER_GWF2_39_17 phylum=PER tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative carbamoyl transferase, NodU family Tax=GWA2_Rokubacteria_70_23_curated
carbamoyl transferase, NodU family
GWF2_NC10X_70_14_gwf2_scaffold_5595_18
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

15790..16848
DNA (1059bp) protein (353aa)
putative methyltransferase (EC:2.1.1.-) Tax=GWA2_Rokubacteria_70_23_curated
putative methyltransferase (EC:2.1.1.-)
Putative Methyltransferase id=4334341 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
GWF2_NC10X_70_14_gwf2_scaffold_5595_19
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(16775..17716)
DNA (942bp) protein (314aa)
Phosphoglycerate dehydrogenase-like oxidoreductase id=4334342 bin=GWF2_Methylomirabilis_70_14 species=Bradyrhizobium sp. WSM471 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein Tax=GWC2_Rokubacteria_70_16_curated
2-hydroxyacid dehydrogenase
GWF2_NC10X_70_14_gwf2_scaffold_5595_20
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(17713..18681)
DNA (969bp) protein (323aa)
Nucleoside-diphosphate-sugar epimerase id=4334343 bin=GWF2_Methylomirabilis_70_14 species=Leptolyngbya sp. PCC 7375 genus=Leptolyngbya taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
NAD-dependent epimerase/dehydratase Tax=GWA2_Rokubacteria_70_23_curated
NAD-dependent epimerase/dehydratase
GWF2_NC10X_70_14_gwf2_scaffold_5595_21
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(18927..19145)
DNA (219bp) protein (73aa)
Nonspecific acid phosphatase id=4334344 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Accumulibacter phosphatis genus=Candidatus Accumulibacter taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Nonspecific acid phosphatase Tax=GWA2_Rokubacteria_70_23_curated
GWF2_NC10X_70_14_gwf2_scaffold_5595_22
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

19301..19576
DNA (276bp) protein (92aa)
id=4334345 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
id=4334345 Tax=GWA2_Rokubacteria_70_23_curated
GWF2_NC10X_70_14_gwf2_scaffold_5595_23
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

19576..19818
DNA (243bp) protein (81aa)
Putative uncharacterized protein id=4334346 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
Displaying 23 items

View Taxonomy