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GWF2_RBX1_38_17_gwf2_scaffold_1081

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Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF2_RBX1_38_17_gwf2_scaffold_1081_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

149..763
DNA (615bp) protein (205aa)
phosphoribosylanthranilate isomerase (EC:5.3.1.24); K01817 phosphoribosylanthranilate isomerase [EC:5.3.1.24] Tax=GWF2_RBX1_38_17_curated
phosphoribosylanthranilate isomerase (EC:5.3.1.24)
N-(5'-phosphoribosyl)anthranilate isomerase id=2719989 bin=GWF2_OP9-related_38_17 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
GWF2_RBX1_38_17_gwf2_scaffold_1081_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(909..1433)
DNA (525bp) protein (175aa)
Uncharacterized protein id=2012802 bin=GWE2_RBX1_39_32 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWF2_RBX1_38_17_gwf2_scaffold_1081_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists


comp(1640..1987)
DNA (348bp) protein (116aa)
50S ribosomal protein L20 id=2012800 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
rplT; 50S ribosomal protein L20 Tax=GWF2_RBX1_38_17_curated
50S ribosomal protein L20
GWF2_RBX1_38_17_gwf2_scaffold_1081_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists


comp(2066..2263)
DNA (198bp) protein (66aa)
50S ribosomal protein L35 id=2719998 bin=GWF2_OP9-related_38_17 species=unknown genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
rpmI; 50S ribosomal protein L35; K02916 large subunit ribosomal protein L35 Tax=GWF2_RBX1_38_17_curated
rpmI; Ribosomal protein L35
GWF2_RBX1_38_17_gwf2_scaffold_1081_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(2284..2706)
DNA (423bp) protein (141aa)
Translation initiation factor IF-3 (Fragment) id=2012797 bin=GWE2_RBX1_39_32 species=Phaeodactylum tricornutum genus=Phaeodactylum taxon_order=Naviculales taxon_class=Bacillariophyceae phylum=Bacillariophyta tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
translation initiation factor 3 (bIF-3)
GWF2_RBX1_38_17_gwf2_scaffold_1081_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(2864..4603)
DNA (1740bp) protein (580aa)
thrS; threonyl-tRNA synthetase (EC:6.1.1.3 3.1.1.-); K01868 threonyl-tRNA synthetase [EC:6.1.1.3] Tax=GWF2_RBX1_38_17_curated
thrS; threonyl-tRNA synthetase (EC:6.1.1.3 3.1.1.-)
Threonine--tRNA ligase id=2012796 bin=GWE2_RBX1_39_32 species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWF2_RBX1_38_17_gwf2_scaffold_1081_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(4610..5083)
DNA (474bp) protein (158aa)
id=24608993 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
id=24608993 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_1081_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(5326..5706)
DNA (381bp) protein (127aa)
Putative uncharacterized protein id=2012794 bin=GWE2_RBX1_39_32 species=Methanocaldococcus villosus genus=Methanocaldococcus taxon_order=Methanococcales taxon_class=Methanococci phylum=Euryarchaeota tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWF2_RBX1_38_17_gwf2_scaffold_1081_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(5707..6186)
DNA (480bp) protein (160aa)
CheC domain protein id=2012793 bin=GWE2_RBX1_39_32 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
chemotaxis protein CheC; K03409 chemotaxis protein CheX Tax=GWF2_RBX1_38_17_curated
chemotaxis protein CheC
GWF2_RBX1_38_17_gwf2_scaffold_1081_10
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(6288..6761)
DNA (474bp) protein (158aa)
Chemotaxis protein id=2012792 bin=GWE2_RBX1_39_32 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
chemotaxis protein; K03409 chemotaxis protein CheX Tax=GWF2_RBX1_38_17_curated
chemotaxis protein
GWF2_RBX1_38_17_gwf2_scaffold_1081_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(6791..7147)
DNA (357bp) protein (119aa)
Response regulator receiver protein id=2149091 bin=GWD2_RBX1-related_39_127 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
response regulator receiver protein; K03413 two-component system, chemotaxis family, response regulator CheY Tax=GWF2_RBX1_38_17_curated
response regulator receiver protein
GWF2_RBX1_38_17_gwf2_scaffold_1081_12
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(7166..9238)
DNA (2073bp) protein (691aa)
CheA signal transduction histidine kinase; K03407 two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] Tax=GWF2_RBX1_38_17_curated
CheA signal transduction histidine kinase id=2012789 bin=GWE2_RBX1_39_32 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
CheA signal transduction histidine kinase
GWF2_RBX1_38_17_gwf2_scaffold_1081_13
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(9240..10424)
DNA (1185bp) protein (395aa)
CheA signal transduction histidine kinase id=2012785 bin=GWE2_RBX1_39_32 species=unknown genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
CheA signal transduction histidine kinase Tax=GWF2_RBX1_38_17_curated
CheA signal transduction histidine kinase
GWF2_RBX1_38_17_gwf2_scaffold_1081_14
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(10430..10924)
DNA (495bp) protein (165aa)
CheW protein id=2012783 bin=GWE2_RBX1_39_32 species=unknown genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
CheW protein; K03408 purine-binding chemotaxis protein CheW Tax=GWF2_RBX1_38_17_curated
CheW protein
GWF2_RBX1_38_17_gwf2_scaffold_1081_15
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(11123..12292)
DNA (1170bp) protein (390aa)
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1 4-benzoquinol methylase-like protein id=2012781 bin=GWE2_RBX1_39_32 species=Paenibacillus terrae genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Tax=GWF2_RBX1_38_17_curated
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
GWF2_RBX1_38_17_gwf2_scaffold_1081_16
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(12323..13477)
DNA (1155bp) protein (385aa)
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1 4-benzoquinol methylase-like protein id=2012759 bin=GWE2_RBX1_39_32 species=Paenibacillus terrae genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase Tax=GWF2_RBX1_38_17_curated
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
GWF2_RBX1_38_17_gwf2_scaffold_1081_17
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(13490..14257)
DNA (768bp) protein (256aa)
rlmB; putative 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB (EC:2.1.1.-); K03218 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] Tax=GWF2_RBX1_38_17_curated
rlmB; putative 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB (EC:2.1.1.-)
RNA methyltransferase, TrmH family, group 3 id=2149070 bin=GWD2_RBX1-related_39_127 species=Mitsuokella multacida genus=Mitsuokella taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWF2_RBX1_38_17_gwf2_scaffold_1081_18
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(14242..15477)
DNA (1236bp) protein (412aa)
acetylornithine and succinylornithine aminotransferase; K00821 acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] Tax=GWF2_RBX1_38_17_curated
Acetylornithine aminotransferase id=2012757 bin=GWE2_RBX1_39_32 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
acetylornithine and succinylornithine aminotransferase
GWF2_RBX1_38_17_gwf2_scaffold_1081_19
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(15653..16555)
DNA (903bp) protein (301aa)
Tyrosine recombinase XerC id=2012756 bin=GWE2_RBX1_39_32 species=Brevibacillus laterosporus genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
xerC; site-specific tyrosine recombinase XerC; K03733 integrase/recombinase XerC Tax=GWF2_RBX1_38_17_curated
xerC_2; tyrosine recombinase XerC
GWF2_RBX1_38_17_gwf2_scaffold_1081_20
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(16558..16980)
DNA (423bp) protein (141aa)
id=2012755 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2012755 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_1081_21
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(17100..17756)
DNA (657bp) protein (219aa)
id=2012754 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2012754 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_1081_22
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(17870..18298)
DNA (429bp) protein (143aa)
id=24608978 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
id=24608978 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_1081_23
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

18496..19701
DNA (1206bp) protein (402aa)
queuine tRNA-ribosyltransferase (EC:2.4.2.29); K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29] Tax=GWF2_RBX1_38_17_curated
queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase id=2149060 bin=GWD2_RBX1-related_39_127 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWF2_RBX1_38_17_gwf2_scaffold_1081_24
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

19716..21044
DNA (1329bp) protein (443aa)
Protein translocase subunit SecD id=2149058 bin=GWD2_RBX1-related_39_127 species=Dethiosulfovibrio peptidovorans genus=Dethiosulfovibrio taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
protein-export membrane protein, SecD/SecF family Tax=GWF2_RBX1_38_17_curated
protein-export membrane protein, SecD/SecF family
GWF2_RBX1_38_17_gwf2_scaffold_1081_25
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

21059..22012
DNA (954bp) protein (318aa)
Protein translocase subunit SecF id=2012750 bin=GWE2_RBX1_39_32 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
secF; preprotein translocase subunit SecF; K03074 preprotein translocase subunit SecF Tax=GWF2_RBX1_38_17_curated
secF; preprotein translocase subunit SecF
GWF2_RBX1_38_17_gwf2_scaffold_1081_26
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

22078..24414
DNA (2337bp) protein (779aa)
DNA translocase FtsK/SpoIIIE id=2012749 bin=GWE2_RBX1_39_32 species=Clostridiaceae bacterium L21-TH-D2 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
ftsK; DNA translocase FtsK/SpoIIIE; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family Tax=GWF2_RBX1_38_17_curated
ftsK; DNA translocase FtsK/SpoIIIE
GWF2_RBX1_38_17_gwf2_scaffold_1081_27
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

24444..25730
DNA (1287bp) protein (429aa)
homoserine dehydrogenase (EC:1.1.1.3); K00003 homoserine dehydrogenase [EC:1.1.1.3] Tax=GWF2_RBX1_38_17_curated
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase id=2012748 bin=GWE2_RBX1_39_32 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWF2_RBX1_38_17_gwf2_scaffold_1081_28
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

25727..26488
DNA (762bp) protein (254aa)
type IV prepilin leader peptidase PilD; K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] Tax=GWF2_RBX1_38_17_curated
Type 4 prepilin-like proteins leader peptide-processing enzyme id=2012747 bin=GWE2_RBX1_39_32 species=Dictyoglomus thermophilum genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
type IV prepilin leader peptidase PilD
GWF2_RBX1_38_17_gwf2_scaffold_1081_29
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

26472..26891
DNA (420bp) protein (140aa)
id=24608971 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
id=24608971 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_1081_30
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

26884..27162
DNA (279bp) protein (93aa)
id=2012745 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2012745 Tax=GWF2_RBX1_38_17_curated
Displaying items 1-30 of 48 in total

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