ggKbase home page

GWF2_RBX1_38_17_gwf2_scaffold_3211

Search features with annotation key words

Displaying 13 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF2_RBX1_38_17_gwf2_scaffold_3211_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(3..12608)
DNA (12606bp) protein (4202aa)
id=1923738 Tax=GWF2_RBX1_38_17_curated
id=1923738 bin=GWD2_RBX1-related_39_127 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWF2_RBX1_38_17_gwf2_scaffold_3211_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(12977..13285)
DNA (309bp) protein (103aa)
id=2162282 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2162282 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_3211_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(13288..15729)
DNA (2442bp) protein (814aa)
id=2162281 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2162281 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_3211_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(15900..17177)
DNA (1278bp) protein (426aa)
id=2162280 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2162280 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_3211_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

17550..19073
DNA (1524bp) protein (508aa)
glycogen/starch synthase; K00703 starch synthase [EC:2.4.1.21] Tax=GWF2_RBX1_38_17_curated
glycogen/starch synthase (EC:2.4.1.21)
Glycogen synthase id=4026396 bin=GWF2_OP9-related_38_17 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
GWF2_RBX1_38_17_gwf2_scaffold_3211_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(19112..19948)
DNA (837bp) protein (279aa)
id=2162276 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2162276 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_3211_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(19935..21173)
DNA (1239bp) protein (413aa)
id=4026402 bin=GWF2_OP9-related_38_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
id=4026402 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_3211_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

21375..23999
DNA (2625bp) protein (875aa)
glycogen debranching enzyme/alpha-amylase (EC:3.2.1.1); K01176 alpha-amylase [EC:3.2.1.1] Tax=GWF2_RBX1_38_17_curated
glycogen debranching enzyme/alpha-amylase (EC:3.2.1.1)
Glycogen debranching enzyme/alpha-amylase id=4026405 bin=GWF2_OP9-related_38_17 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
GWF2_RBX1_38_17_gwf2_scaffold_3211_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(23996..26218)
DNA (2223bp) protein (741aa)
4-alpha-glucanotransferase id=24608753 bin=RAAC11 species=Acetivibrio cellulolyticus genus=Acetivibrio taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
4-alpha-glucanotransferase Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_3211_10
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(26588..26896)
DNA (309bp) protein (103aa)
id=2162231 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2162231 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_3211_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(26921..28981)
DNA (2061bp) protein (687aa)
id=4026413 bin=GWF2_OP9-related_38_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
id=4026413 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_3211_12
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(29182..34344)
DNA (5163bp) protein (1721aa)
tRNA-dihydrouridine synthase Tax=GWF2_RBX1_38_17_curated
tRNA-dihydrouridine synthase id=4026415 bin=GWF2_OP9-related_38_17 species=Clostridium novyi genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
GWF2_RBX1_38_17_gwf2_scaffold_3211_13
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(34368..35411)
DNA (1044bp) protein (348aa)
id=2162228 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2162228 Tax=GWF2_RBX1_38_17_curated
Displaying 13 items

View Taxonomy