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GWF2_RBX1_38_17_gwf2_scaffold_402

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Displaying items 1-30 of 80 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF2_RBX1_38_17_gwf2_scaffold_402_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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272..1087
DNA (816bp) protein (272aa)
id=1974020 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1974020 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_402_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(1156..4272)
DNA (3117bp) protein (1039aa)
pcrA; ATP-dependent helicase; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12] Tax=GWF2_RBX1_38_17_curated
ATP-dependent DNA helicase PcrA id=1983699 bin=GWD2_RBX1-related_39_127 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
hypothetical protein
GWF2_RBX1_38_17_gwf2_scaffold_402_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(4272..7394)
DNA (3123bp) protein (1041aa)
UvrD/REP helicase id=24608175 bin=RAAC11 species=Methanosphaerula palustris genus=Methanosphaerula taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=RAAC11 organism_group=Unknown_CP
UvrD/REP helicase Tax=GWF2_RBX1_38_17_curated
UvrD/REP helicase
GWF2_RBX1_38_17_gwf2_scaffold_402_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

7562..7771
DNA (210bp) protein (70aa)
Putative uncharacterized protein id=1974013 bin=GWE2_RBX1_39_32 species=Methanoplanus limicola genus=Methanoplanus taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWF2_RBX1_38_17_gwf2_scaffold_402_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

7783..8889
DNA (1107bp) protein (369aa)
Putative uncharacterized protein id=4153349 bin=GWF2_OP9-related_38_17 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWF2_RBX1_38_17_gwf2_scaffold_402_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(8986..9738)
DNA (753bp) protein (251aa)
Periplasmic component of amino acid ABC-type transporter/signal transduction system id=1973965 bin=GWE2_RBX1_39_32 species=Photobacterium sp. AK15 genus=Photobacterium taxon_order=Vibrionales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWF2_RBX1_38_17_gwf2_scaffold_402_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

9902..11518
DNA (1617bp) protein (539aa)
methyl-accepting chemotaxis sensory transducer with Cache sensor; K03406 methyl-accepting chemotaxis protein Tax=GWF2_RBX1_38_17_curated
Methyl-accepting chemotaxis sensory transducer with Cache sensor id=1973960 bin=GWE2_RBX1_39_32 species=Ornithinibacillus scapharcae genus=Ornithinibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
methyl-accepting chemotaxis sensory transducer with Cache sensor
GWF2_RBX1_38_17_gwf2_scaffold_402_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(11508..12230)
DNA (723bp) protein (241aa)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase id=1973956 bin=GWE2_RBX1_39_32 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
phosphoglycerate mutase 1 family Tax=GWF2_RBX1_38_17_curated
phosphoglycerate mutase 1 family
GWF2_RBX1_38_17_gwf2_scaffold_402_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(12276..12944)
DNA (669bp) protein (223aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 id=1973948 bin=GWE2_RBX1_39_32 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
phosphatase/phosphohexomutase HAD superfamily Tax=GWF2_RBX1_38_17_curated
phosphatase/phosphohexomutase HAD superfamily
GWF2_RBX1_38_17_gwf2_scaffold_402_10
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(12941..13714)
DNA (774bp) protein (258aa)
Putative uncharacterized protein id=1983707 bin=GWD2_RBX1-related_39_127 species=Meiothermus ruber genus=Meiothermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
hypothetical protein; K07043 Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWF2_RBX1_38_17_gwf2_scaffold_402_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(13827..14291)
DNA (465bp) protein (155aa)
Uncharacterized protein id=1973938 bin=GWE2_RBX1_39_32 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
phospholipid-binding protein, PBP family Tax=GWF2_RBX1_38_17_curated
phospholipid-binding protein, PBP family
GWF2_RBX1_38_17_gwf2_scaffold_402_12
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(14458..15198)
DNA (741bp) protein (247aa)
id=24608166 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
id=24608166 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_402_13
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(15198..15671)
DNA (474bp) protein (158aa)
id=1973936 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1973936 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_402_14
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(15915..16313)
DNA (399bp) protein (133aa)
Heat shock protein Hsp20 id=1983711 bin=GWD2_RBX1-related_39_127 species=unknown genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
heat shock protein Hsp20 Tax=GWF2_RBX1_38_17_curated
heat shock protein Hsp20
GWF2_RBX1_38_17_gwf2_scaffold_402_15
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(16332..16751)
DNA (420bp) protein (140aa)
Heat shock protein Hsp20 id=1973930 bin=GWE2_RBX1_39_32 species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
heat shock protein Hsp20; K13993 HSP20 family protein Tax=GWF2_RBX1_38_17_curated
heat shock protein Hsp20
GWF2_RBX1_38_17_gwf2_scaffold_402_16
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(16828..17286)
DNA (459bp) protein (153aa)
Uncharacterized protein id=1973928 bin=GWE2_RBX1_39_32 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWF2_RBX1_38_17_gwf2_scaffold_402_17
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(17496..18029)
DNA (534bp) protein (178aa)
NUDIX hydrolase id=1973926 bin=GWE2_RBX1_39_32 species=Clostridium cellulovorans genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
NUDIX hydrolase Tax=GWF2_RBX1_38_17_curated
NUDIX hydrolase
GWF2_RBX1_38_17_gwf2_scaffold_402_18
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(18075..18578)
DNA (504bp) protein (168aa)
Nitroreductase id=1973924 bin=GWE2_RBX1_39_32 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
nitroreductase Tax=GWF2_RBX1_38_17_curated
nitroreductase
GWF2_RBX1_38_17_gwf2_scaffold_402_19
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(18609..19145)
DNA (537bp) protein (179aa)
cyclic phosphodiesterase (EC:3.1.4.-)
2 3 cyclic phosphodiesterase id=1973922 bin=GWE2_RBX1_39_32 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_402_20
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(19229..19846)
DNA (618bp) protein (206aa)
Putative uncharacterized protein id=1983787 bin=GWD2_RBX1-related_39_127 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
hypothetical protein; K07053 Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWF2_RBX1_38_17_gwf2_scaffold_402_21
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(19862..21601)
DNA (1740bp) protein (580aa)
UPF0313 protein TherJR_1432 id=4153379 bin=GWF2_OP9-related_38_17 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
radical SAM protein Tax=GWF2_RBX1_38_17_curated
radical SAM protein
GWF2_RBX1_38_17_gwf2_scaffold_402_22
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(21703..24180)
DNA (2478bp) protein (826aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase id=1973919 bin=GWE2_RBX1_39_32 species=Spirochaeta thermophila genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWF2_RBX1_38_17_gwf2_scaffold_402_23
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(24183..24530)
DNA (348bp) protein (116aa)
Putative uncharacterized protein id=1973918 bin=GWE2_RBX1_39_32 species=Dysgonomonas gadei genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
transcriptional regulator Tax=GWF2_RBX1_38_17_curated
transcriptional regulator
GWF2_RBX1_38_17_gwf2_scaffold_402_24
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(24724..26145)
DNA (1422bp) protein (474aa)
id=1973917 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1973917 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_402_25
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(26164..26985)
DNA (822bp) protein (274aa)
id=1973916 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1973916 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_402_26
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(27278..28933)
DNA (1656bp) protein (552aa)
Uncharacterized protein id=1973915 bin=GWE2_RBX1_39_32 species=Glaciecola arctica genus=Glaciecola taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
cell wall binding repeat 2-containing protein Tax=GWF2_RBX1_38_17_curated
cell wall binding repeat 2-containing protein
GWF2_RBX1_38_17_gwf2_scaffold_402_27
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(29242..30108)
DNA (867bp) protein (289aa)
radical SAM domain-containing protein id=1983802 bin=GWD2_RBX1-related_39_127 species=Clostridium arbusti genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
putative Fe-S oxidoreductase Tax=GWF2_RBX1_38_17_curated
putative Fe-S oxidoreductase
GWF2_RBX1_38_17_gwf2_scaffold_402_28
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(30262..30684)
DNA (423bp) protein (141aa)
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein id=1973913 bin=GWE2_RBX1_39_32 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
pyridoxamine 5'-phosphate oxidase-like FMN-binding protein Tax=GWF2_RBX1_38_17_curated
pyridoxamine 5'-phosphate oxidase-like FMN-binding protein
GWF2_RBX1_38_17_gwf2_scaffold_402_trna_4
unknown

Not on your lists

comp(30783..30857)
DNA (75bp)
transferRNA
GWF2_RBX1_38_17_gwf2_scaffold_402_29
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(31068..32141)
DNA (1074bp) protein (358aa)
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor id=24610711 bin=RAAC11 species=unknown genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor Tax=GWF2_RBX1_38_17_curated
RpoD subfamily RNA polymerase sigma-70 subunit
Displaying items 1-30 of 80 in total

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