ggKbase home page

GWF2_RBX1_38_17_gwf2_scaffold_602

Search features with annotation key words

Displaying items 1-30 of 70 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF2_RBX1_38_17_gwf2_scaffold_602_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

3..164
DNA (162bp) protein (54aa)
id=2127186 bin=GWD2_RBX1-related_39_127 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
id=2127186 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_602_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

335..976
DNA (642bp) protein (214aa)
Putative uncharacterized protein id=4368009 bin=GWF2_OP9-related_38_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
Putative uncharacterized protein Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_602_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

969..2528
DNA (1560bp) protein (520aa)
Signal transduction histidine kinase regulating citrate/malate metabolism id=4368010 bin=GWF2_OP9-related_38_17 species=unknown genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
histidine kinase Tax=GWF2_RBX1_38_17_curated
histidine kinase
GWF2_RBX1_38_17_gwf2_scaffold_602_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

2584..3741
DNA (1158bp) protein (386aa)
LuxR family two component transcriptional regulator id=1912723 bin=GWE2_RBX1_39_32 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
LuxR family two component transcriptional regulator Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_602_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

4100..4606
DNA (507bp) protein (169aa)
Putative adenylate/guanylate cyclase id=1912725 bin=GWE2_RBX1_39_32 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWF2_RBX1_38_17_gwf2_scaffold_602_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

4702..5940
DNA (1239bp) protein (413aa)
Glycosyl transferase group 1 id=1912727 bin=GWE2_RBX1_39_32 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
glycoside hydrolase family protein Tax=GWF2_RBX1_38_17_curated
glycoside hydrolase family protein
GWF2_RBX1_38_17_gwf2_scaffold_602_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

5967..6365
DNA (399bp) protein (133aa)
Putative uncharacterized protein id=2127255 bin=GWD2_RBX1-related_39_127 species=Microcoleus sp. PCC 7113 genus=Microcoleus taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWF2_RBX1_38_17_gwf2_scaffold_602_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

6520..7380
DNA (861bp) protein (287aa)
glycosyl transferase family protein; K12992 rhamnosyltransferase [EC:2.4.1.-] Tax=GWF2_RBX1_38_17_curated
Putative uncharacterized protein id=1912729 bin=GWE2_RBX1_39_32 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
glycosyl transferase family protein
GWF2_RBX1_38_17_gwf2_scaffold_602_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

7383..8528
DNA (1146bp) protein (382aa)
Putative uncharacterized protein id=4368042 bin=GWF2_OP9-related_38_17 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
Putative uncharacterized protein Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_602_10
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

8825..9967
DNA (1143bp) protein (381aa)
Putative uncharacterized protein id=1912731 bin=GWE2_RBX1_39_32 species=unknown genus=Shewanella taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWF2_RBX1_38_17_gwf2_scaffold_602_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

10022..12109
DNA (2088bp) protein (696aa)
probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY-like Tax=GWF2_RBX1_38_17_curated
probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY-like id=24609961 bin=RAAC11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=RAAC11 organism_group=Unknown_CP
O-linked N-acetylglucosamine transferase, SPINDLY family
GWF2_RBX1_38_17_gwf2_scaffold_602_12
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

12218..13663
DNA (1446bp) protein (482aa)
undecaprenyl-phosphate galactose phosphotransferase (EC:2.7.8.6) Tax=GWF2_RBX1_38_17_curated
Putative polysaccharide biosynthesis polyprenyl glycosylphosphotransferase id=1912759 bin=GWE2_RBX1_39_32 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
undecaprenyl-phosphate galactose phosphotransferase
GWF2_RBX1_38_17_gwf2_scaffold_602_13
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

13834..14640
DNA (807bp) protein (269aa)
Teichoic acid biosynthesis id=1912761 bin=GWE2_RBX1_39_32 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
teichoic acid biosynthesis Tax=GWF2_RBX1_38_17_curated
teichoic acid biosynthesis
GWF2_RBX1_38_17_gwf2_scaffold_602_14
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

14657..16024
DNA (1368bp) protein (456aa)
id=1912764 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1912764 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_602_15
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

16066..17268
DNA (1203bp) protein (401aa)
glycosyltransferase id=24609957 bin=RAAC11 species=Verrucomicrobium spinosum genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=RAAC11 organism_group=Unknown_CP
glycosyltransferase Tax=GWF2_RBX1_38_17_curated
glycosyltransferase
GWF2_RBX1_38_17_gwf2_scaffold_602_16
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(17273..18316)
DNA (1044bp) protein (348aa)
BioB; biotin synthase and related enzymes; K01012 biotin synthetase [EC:2.8.1.6] Tax=GWF2_RBX1_38_17_curated
Biotin synthase and related enzymes id=1912768 bin=GWE2_RBX1_39_32 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
BioB; biotin synthase and related enzymes
GWF2_RBX1_38_17_gwf2_scaffold_602_17
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(18334..19581)
DNA (1248bp) protein (416aa)
Small GTP-binding protein id=2127276 bin=GWD2_RBX1-related_39_127 species=Alkaliphilus metalliredigens genus=Alkaliphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
small GTP-binding protein Tax=GWF2_RBX1_38_17_curated
small GTP-binding protein
GWF2_RBX1_38_17_gwf2_scaffold_602_18
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(19623..21002)
DNA (1380bp) protein (460aa)
Iron-only hydrogenase maturation protein HydG id=2127278 bin=GWD2_RBX1-related_39_127 species=Desulfovibrio vulgaris genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
thiH; thiamine biosynthesis protein ThiH; K03150 thiamine biosynthesis ThiH Tax=GWF2_RBX1_38_17_curated
biotin and thiamin synthesis associated protein
GWF2_RBX1_38_17_gwf2_scaffold_602_19
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(21033..23303)
DNA (2271bp) protein (757aa)
hydrogenase, Fe-only; K00336 NADH-quinone oxidoreductase subunit G [EC:1.6.5.3] id=24609953 bin=RAAC11 species=Holophaga foetida genus=Holophaga taxon_order=Holophagales taxon_class=Holophagae phylum=Acidobacteria tax=RAAC11 organism_group=Unknown_CP
hydrogenase, Fe-only; K00336 NADH-quinone oxidoreductase subunit G [EC:1.6.5.3] Tax=GWF2_RBX1_38_17_curated
hydrogenase, Fe-only
GWF2_RBX1_38_17_gwf2_scaffold_602_20
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(23386..25179)
DNA (1794bp) protein (598aa)
hydB; Fe-hydrogenase subunit beta; K00335 NADH-quinone oxidoreductase subunit F [EC:1.6.5.3] Tax=GWF2_RBX1_38_17_curated
NAD-reducing hydrogenase subunit HoxF id=1912780 bin=GWE2_RBX1_39_32 species=Caloramator australicus genus=Caloramator taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hydB; Fe-hydrogenase subunit beta
GWF2_RBX1_38_17_gwf2_scaffold_602_21
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(25176..25529)
DNA (354bp) protein (118aa)
Ferredoxin id=2127284 bin=GWD2_RBX1-related_39_127 species=Clostridiaceae bacterium L21-TH-D2 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
Ferredoxin Tax=GWF2_RBX1_38_17_curated
Ferredoxin
GWF2_RBX1_38_17_gwf2_scaffold_602_22
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(25583..26200)
DNA (618bp) protein (206aa)
rex; redox-sensing transcriptional repressor Rex; K01926 redox-sensing transcriptional repressor id=24609950 bin=RAAC11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Verrucomicrobia tax=RAAC11 organism_group=Unknown_CP
rex; redox-sensing transcriptional repressor Rex; K01926 redox-sensing transcriptional repressor Tax=GWF2_RBX1_38_17_curated
rex; redox-sensing transcriptional repressor Rex
GWF2_RBX1_38_17_gwf2_scaffold_602_23
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(26263..26718)
DNA (456bp) protein (152aa)
Response regulator receiver id=2127288 bin=GWD2_RBX1-related_39_127 species=Holophaga foetida genus=Holophaga taxon_order=Holophagales taxon_class=Holophagae phylum=Acidobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
response regulator receiver protein Tax=GWF2_RBX1_38_17_curated
response regulator receiver protein
GWF2_RBX1_38_17_gwf2_scaffold_602_24
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(26734..27315)
DNA (582bp) protein (194aa)
Response regulator receiver id=2127290 bin=GWD2_RBX1-related_39_127 species=Holophaga foetida genus=Holophaga taxon_order=Holophagales taxon_class=Holophagae phylum=Acidobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
response regulator receiver protein Tax=GWF2_RBX1_38_17_curated
response regulator receiver protein
GWF2_RBX1_38_17_gwf2_scaffold_602_25
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(27363..28994)
DNA (1632bp) protein (544aa)
Putative uncharacterized protein id=2127292 bin=GWD2_RBX1-related_39_127 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
PAS sensor protein Tax=GWF2_RBX1_38_17_curated
PAS sensor protein
GWF2_RBX1_38_17_gwf2_scaffold_602_26
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(29026..30171)
DNA (1146bp) protein (382aa)
Putative uncharacterized protein id=1912798 bin=GWE2_RBX1_39_32 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
response regulator receiver protein Tax=GWF2_RBX1_38_17_curated
response regulator receiver protein
GWF2_RBX1_38_17_gwf2_scaffold_602_27
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(30164..31375)
DNA (1212bp) protein (404aa)
Putative uncharacterized protein id=1912801 bin=GWE2_RBX1_39_32 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
response regulator receiver protein Tax=GWF2_RBX1_38_17_curated
response regulator receiver protein
GWF2_RBX1_38_17_gwf2_scaffold_602_28
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(31396..32538)
DNA (1143bp) protein (381aa)
Putative uncharacterized protein id=1912804 bin=GWE2_RBX1_39_32 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
response regulator receiver protein Tax=GWF2_RBX1_38_17_curated
response regulator receiver protein
GWF2_RBX1_38_17_gwf2_scaffold_602_29
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(32737..34254)
DNA (1518bp) protein (506aa)
Nif-specific regulatory protein id=1912807 bin=GWE2_RBX1_39_32 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Nif-specific regulatory protein Tax=GWF2_RBX1_38_17_curated
Nif-specific regulatory protein
GWF2_RBX1_38_17_gwf2_scaffold_602_30
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(34317..34781)
DNA (465bp) protein (155aa)
Acetyltransferase, GNAT family id=1912810 bin=GWE2_RBX1_39_32 species=Syntrophobotulus glycolicus genus=Syntrophobotulus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
acetyltransferase, GNAT family Tax=GWF2_RBX1_38_17_curated
acetyltransferase, GNAT family
Displaying items 1-30 of 70 in total

View Taxonomy