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GWF2_RBX1_38_17_gwf2_scaffold_2486

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF2_RBX1_38_17_gwf2_scaffold_2486_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(38..2989)
DNA (2952bp) protein (984aa)
alpha-glucan phosphorylase (EC:2.4.1.1); K00688 starch phosphorylase [EC:2.4.1.1] Tax=GWF2_RBX1_38_17_curated
alpha-glucan phosphorylase (EC:2.4.1.1)
Alpha-glucan phosphorylase id=1973761 bin=GWE2_RBX1_39_32 species=Thermococcus litoralis genus=Thermococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWF2_RBX1_38_17_gwf2_scaffold_2486_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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3569..4990
DNA (1422bp) protein (474aa)
Putative uncharacterized protein id=1973715 bin=GWE2_RBX1_39_32 species=Natranaerobius thermophilus genus=Natranaerobius taxon_order=Natranaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein; K09749 hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWF2_RBX1_38_17_gwf2_scaffold_2486_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

5161..5349
DNA (189bp) protein (63aa)
id=1973714 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1973714 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_2486_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(5339..7666)
DNA (2328bp) protein (776aa)
DNA internalization-related competence protein ComEC/Rec2 Tax=GWF2_RBX1_38_17_curated
DNA internalization-related competence protein ComEC/Rec2 id=1973712 bin=GWE2_RBX1_39_32 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
DNA internalization-related competence protein ComEC/Rec2
GWF2_RBX1_38_17_gwf2_scaffold_2486_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(7782..8081)
DNA (300bp) protein (100aa)
id=24610790 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
id=24610790 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_2486_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(8158..8868)
DNA (711bp) protein (237aa)
purQ; phosphoribosylformylglycinamidine synthase large subunit (EC:6.3.5.3); K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] Tax=GWF2_RBX1_38_17_curated
purQ; phosphoribosylformylglycinamidine synthase large subunit (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase 1 id=1756472 bin=GWD2_RBX1-related_39_127 species=Deferribacter desulfuricans genus=Deferribacter taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWF2_RBX1_38_17_gwf2_scaffold_2486_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(8924..9178)
DNA (255bp) protein (85aa)
phosphoribosylformylglycinamidine synthase subunit PurS; K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] Tax=GWF2_RBX1_38_17_curated
Phosphoribosylformylglycinamidine synthase subunit PurS id=1973708 bin=GWE2_RBX1_39_32 species=unknown genus=Cyanothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
phosphoribosylformylglycinamidine synthase subunit PurS
GWF2_RBX1_38_17_gwf2_scaffold_2486_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

9539..11041
DNA (1503bp) protein (501aa)
Two component, sigma54 specific, transcriptional regulator, Fis family id=1973706 bin=GWE2_RBX1_39_32 species=Desulfotomaculum acetoxidans genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
two component, sigma54 specific, transcriptional regulator, Fis family; K07714 two-component system, NtrC family, response regulator AtoC Tax=GWF2_RBX1_38_17_curated
two component, sigma54 specific, transcriptional regulator, Fis family
GWF2_RBX1_38_17_gwf2_scaffold_2486_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

11463..11846
DNA (384bp) protein (128aa)
Response regulator receiver protein id=1973704 bin=GWE2_RBX1_39_32 species=Natranaerobius thermophilus genus=Natranaerobius taxon_order=Natranaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
response regulator receiver protein Tax=GWF2_RBX1_38_17_curated
response regulator receiver protein
GWF2_RBX1_38_17_gwf2_scaffold_2486_10
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

12040..12630
DNA (591bp) protein (197aa)
acyl-phosphate glycerol-3-phosphate acyltransferase; K08591 glycerol-3-phosphate acyltransferase PlsY [EC:2.3.1.15] Tax=GWF2_RBX1_38_17_curated
Glycerol-3-phosphate acyltransferase id=1973702 bin=GWE2_RBX1_39_32 species=Ilyobacter polytropus genus=Ilyobacter taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
acyl-phosphate glycerol-3-phosphate acyltransferase
GWF2_RBX1_38_17_gwf2_scaffold_2486_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

12627..13664
DNA (1038bp) protein (346aa)
glycerol 3-phosphate dehydrogenase; K00057 glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] Tax=GWF2_RBX1_38_17_curated
Glycerol-3-phosphate dehydrogenase [NAD(P)+] id=1973701 bin=GWE2_RBX1_39_32 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
ketopantoate reductase PanE/ApbA family protein
GWF2_RBX1_38_17_gwf2_scaffold_2486_12
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

13657..14034
DNA (378bp) protein (126aa)
Sigma-54 factor interaction domain-containing protein id=1973700 bin=GWE2_RBX1_39_32 species=Clostridium beijerinckii genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
two component, sigma54 specific, Fis family transcriptional regulator; K07714 two-component system, NtrC family, response regulator AtoC Tax=GWF2_RBX1_38_17_curated
two component, sigma54 specific, Fis family transcriptional regulator
GWF2_RBX1_38_17_gwf2_scaffold_2486_13
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

14021..15307
DNA (1287bp) protein (429aa)
GTPase HflX id=1973699 bin=GWE2_RBX1_39_32 species=Simkania negevensis genus=Simkania taxon_order=Chlamydiales taxon_class=Chlamydiia phylum=Chlamydiae tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hflX; GTP-binding protein hflX; K03665 GTP-binding protein HflX Tax=GWF2_RBX1_38_17_curated
hflX; GTP-binding protein hflX
GWF2_RBX1_38_17_gwf2_scaffold_2486_14
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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15372..18137
DNA (2766bp) protein (922aa)
bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon id=1973698 bin=GWE2_RBX1_39_32 species=Ornithinibacillus scapharcae genus=Ornithinibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon Tax=GWF2_RBX1_38_17_curated
bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon
GWF2_RBX1_38_17_gwf2_scaffold_2486_15
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

18125..19777
DNA (1653bp) protein (551aa)
PglZ domain-containing protein id=1973697 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
PglZ domain-containing protein Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_2486_16
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

19802..20431
DNA (630bp) protein (210aa)
70 kDa peptidyl-prolyl isomerase id=1973696 bin=GWE2_RBX1_39_32 species=Medicago truncatula genus=Medicago taxon_order=Fabales taxon_class=unknown phylum=Streptophyta tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
70 kDa peptidyl-prolyl isomerase Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_2486_17
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(20435..21061)
DNA (627bp) protein (209aa)
DNA uptake protein related DNA-binding protein id=1973695 bin=GWE2_RBX1_39_32 species=Bacillus smithii genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
DNA uptake protein related DNA-binding protein; K02237 competence protein ComEA Tax=GWF2_RBX1_38_17_curated
comEA; ComE operon protein 1
GWF2_RBX1_38_17_gwf2_scaffold_2486_trna_1
unknown

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21316..21387
DNA (72bp)
transferRNA
GWF2_RBX1_38_17_gwf2_scaffold_2486_trna_2
unknown

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21465..21538
DNA (74bp)
transferRNA
GWF2_RBX1_38_17_gwf2_scaffold_2486_18
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(21562..22395)
DNA (834bp) protein (278aa)
Uncharacterized protein id=1973694 bin=GWE2_RBX1_39_32 species=Pontibacter sp. BAB1700 genus=Pontibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
GntR family transcriptional regulator
GWF2_RBX1_38_17_gwf2_scaffold_2486_19
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(22564..24708)
DNA (2145bp) protein (715aa)
RNA binding S1 id=3850712 bin=GWF2_OP9-related_38_17 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
probable transcription accessory protein Tax=GWF2_RBX1_38_17_curated
Tex-like protein
Displaying 21 items

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