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GWF2_RBX1_38_17_gwf2_scaffold_2348

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF2_RBX1_38_17_gwf2_scaffold_2348_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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3..1295
DNA (1293bp) protein (431aa)
homoaconitate hydratase family protein; K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] Tax=GWF2_RBX1_38_17_curated
3-isopropylmalate dehydratase id=1733681 bin=GWD2_RBX1-related_39_127 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
homoaconitate hydratase family protein
GWF2_RBX1_38_17_gwf2_scaffold_2348_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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1364..1915
DNA (552bp) protein (184aa)
leuD; 3-isopropylmalate dehydratase small subunit (EC:4.2.1.33); K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] Tax=GWF2_RBX1_38_17_curated
leuD; 3-isopropylmalate dehydratase small subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit id=1733680 bin=GWD2_RBX1-related_39_127 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWF2_RBX1_38_17_gwf2_scaffold_2348_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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1943..3016
DNA (1074bp) protein (358aa)
3-isopropylmalate dehydrogenase (EC:1.1.1.85); K00052 3-isopropylmalate dehydrogenase [EC:1.1.1.85] Tax=GWF2_RBX1_38_17_curated
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase id=1749879 bin=GWE2_RBX1_39_32 species=unknown genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWF2_RBX1_38_17_gwf2_scaffold_2348_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(3219..3611)
DNA (393bp) protein (131aa)
id=1749878 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1749878 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_2348_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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3913..5532
DNA (1620bp) protein (540aa)
2-isopropylmalate synthase (EC:2.3.1.182); K01649 2-isopropylmalate synthase [EC:2.3.3.13] Tax=GWF2_RBX1_38_17_curated
2-isopropylmalate synthase (EC:2.3.1.182)
2-isopropylmalate synthase/homocitrate synthase family protein id=3811013 bin=GWF2_OP9-related_38_17 species=Caldalkalibacillus thermarum genus=Caldalkalibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
GWF2_RBX1_38_17_gwf2_scaffold_2348_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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5507..6814
DNA (1308bp) protein (436aa)
diaminopimelate decarboxylase (EC:4.1.1.20); K01586 diaminopimelate decarboxylase [EC:4.1.1.20] Tax=GWF2_RBX1_38_17_curated
Diaminopimelate decarboxylase id=1749871 bin=GWE2_RBX1_39_32 species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
diaminopimelate decarboxylase
GWF2_RBX1_38_17_gwf2_scaffold_2348_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

6818..7657
DNA (840bp) protein (280aa)
Uncharacterized protein id=1749868 bin=GWE2_RBX1_39_32 species=Tepidanaerobacter acetatoxydans genus=Tepidanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
ybbP; putative enzyme with DAC domain protein
GWF2_RBX1_38_17_gwf2_scaffold_2348_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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7674..8465
DNA (792bp) protein (264aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11); K00606 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] Tax=GWF2_RBX1_38_17_curated
3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase id=1749864 bin=GWE2_RBX1_39_32 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWF2_RBX1_38_17_gwf2_scaffold_2348_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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8535..9194
DNA (660bp) protein (220aa)
serine O-acetyltransferase (EC:2.3.1.30); K00640 serine O-acetyltransferase [EC:2.3.1.30] Tax=GWF2_RBX1_38_17_curated
serine O-acetyltransferase (EC:2.3.1.30)
UPI00020A96B5 related cluster id=1749860 bin=GWE2_RBX1_39_32 species=Thermodesulfobium narugense genus=Thermodesulfobium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWF2_RBX1_38_17_gwf2_scaffold_2348_10
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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9157..10506
DNA (1350bp) protein (450aa)
cysS; cysteinyl-tRNA synthetase; K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] Tax=GWF2_RBX1_38_17_curated
cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase id=1733658 bin=GWD2_RBX1-related_39_127 species=unknown genus=Thermoanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWF2_RBX1_38_17_gwf2_scaffold_2348_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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10558..11406
DNA (849bp) protein (283aa)
formyltetrahydrofolate deformylase; K01433 formyltetrahydrofolate deformylase [EC:3.5.1.10] id=24609518 bin=RAAC11 species=Desulfovibrio africanus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RAAC11 organism_group=Unknown_CP
formyltetrahydrofolate deformylase; K01433 formyltetrahydrofolate deformylase [EC:3.5.1.10] Tax=GWF2_RBX1_38_17_curated
formyltetrahydrofolate deformylase
GWF2_RBX1_38_17_gwf2_scaffold_2348_12
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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11463..12023
DNA (561bp) protein (187aa)
GTP cyclohydrolase I (EC:3.5.4.16) id=24609519 bin=RAAC11 species=unknown genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
GTP cyclohydrolase I (EC:3.5.4.16) Tax=GWF2_RBX1_38_17_curated
GTP cyclohydrolase I (EC:3.5.4.16)
GWF2_RBX1_38_17_gwf2_scaffold_2348_13
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(12170..13276)
DNA (1107bp) protein (369aa)
deoxyhypusine synthase; K00809 deoxyhypusine synthase [EC:2.5.1.46] Tax=GWF2_RBX1_38_17_curated
Deoxyhypusine synthase-like protein id=1749848 bin=GWE2_RBX1_39_32 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
deoxyhypusine synthase
GWF2_RBX1_38_17_gwf2_scaffold_2348_14
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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13447..14550
DNA (1104bp) protein (368aa)
YcdH id=1749846 bin=GWE2_RBX1_39_32 species=Bacillus sp. SG-1 genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
zinc ABC transporter extracellular binding protein; K09815 zinc transport system substrate-binding protein Tax=GWF2_RBX1_38_17_curated
zinc ABC transporter extracellular binding protein
GWF2_RBX1_38_17_gwf2_scaffold_2348_15
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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14591..15361
DNA (771bp) protein (257aa)
ABC transporter; K09817 zinc transport system ATP-binding protein [EC:3.6.3.-] Tax=GWF2_RBX1_38_17_curated
ABC transporter related id=1749843 bin=GWE2_RBX1_39_32 species=unknown genus=Sulfurihydrogenibium taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
ABC transporter
GWF2_RBX1_38_17_gwf2_scaffold_2348_16
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

15378..16178
DNA (801bp) protein (267aa)
ABC-3 protein; K09816 zinc transport system permease protein id=24609523 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
ABC-3 protein; K09816 zinc transport system permease protein Tax=GWF2_RBX1_38_17_curated
ABC-3 protein
GWF2_RBX1_38_17_gwf2_scaffold_2348_17
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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16180..17076
DNA (897bp) protein (299aa)
Putative uncharacterized protein id=1749839 bin=GWE2_RBX1_39_32 species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWF2_RBX1_38_17_gwf2_scaffold_2348_18
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

17097..17603
DNA (507bp) protein (169aa)
id=1749838 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1749838 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_2348_19
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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17717..18730
DNA (1014bp) protein (338aa)
2-nitropropane dioxygenase; K02371 enoyl-[acyl carrier protein] reductase II [EC:1.3.1.-] Tax=GWF2_RBX1_38_17_curated
2-nitropropane dioxygenase, NPD id=1733640 bin=GWD2_RBX1-related_39_127 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
2-nitropropane dioxygenase
GWF2_RBX1_38_17_gwf2_scaffold_2348_20
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(18765..19775)
DNA (1011bp) protein (337aa)
hypothetical protein id=24609527 bin=RAAC11 species=Clostridium kluyveri genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWF2_RBX1_38_17_gwf2_scaffold_2348_21
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(19801..20880)
DNA (1080bp) protein (360aa)
Glycosyl transferase family 2 id=1749832 bin=GWE2_RBX1_39_32 species=ACD73 genus=ACD73 taxon_order=ACD73 taxon_class=ACD73 phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
glycosyl transferase family protein Tax=GWF2_RBX1_38_17_curated
glycosyl transferase family protein
GWF2_RBX1_38_17_gwf2_scaffold_2348_22
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(20935..22014)
DNA (1080bp) protein (360aa)
Putative mannosyltransferase id=1749830 bin=GWE2_RBX1_39_32 species=ACD73 genus=ACD73 taxon_order=ACD73 taxon_class=ACD73 phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
family 2 glycosyl transferase; K07011 Tax=GWF2_RBX1_38_17_curated
family 2 glycosyl transferase
GWF2_RBX1_38_17_gwf2_scaffold_2348_23
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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22019..22327
DNA (309bp) protein (103aa)
id=24609530 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
id=24609530 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_2348_24
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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22469..22783
DNA (315bp) protein (105aa)
DNA polymerase beta domain protein region id=1733630 bin=GWD2_RBX1-related_39_127 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
DNA polymerase subunit beta Tax=GWF2_RBX1_38_17_curated
DNA polymerase subunit beta
GWF2_RBX1_38_17_gwf2_scaffold_2348_25
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

22764..23147
DNA (384bp) protein (128aa)
id=1749816 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1749816 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_2348_26
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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23692..24870
DNA (1179bp) protein (393aa)
Putative uncharacterized protein id=1733627 bin=GWD2_RBX1-related_39_127 species=Candidatus Amoebophilus asiaticus genus=Candidatus Amoebophilus taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWF2_RBX1_38_17_gwf2_scaffold_2348_27
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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25042..25590
DNA (549bp) protein (183aa)
Glycosyl transferase, group 1 family id=1749812 bin=GWE2_RBX1_39_32 species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Glycosyl transferase, group 1 family Tax=GWF2_RBX1_38_17_curated
Displaying 27 items

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