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GWF2_RBX1_38_17_gwf2_scaffold_1446

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Displaying items 1-30 of 34 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF2_RBX1_38_17_gwf2_scaffold_1446_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

2..289
DNA (288bp) protein (96aa)
ribulose-phosphate 3-epimerase (EC:5.1.3.1) id=24609860 bin=RAAC11 species=Porphyromonas levii genus=Porphyromonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=RAAC11 organism_group=Unknown_CP
ribulose-phosphate 3-epimerase (EC:5.1.3.1); K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1] Tax=GWF2_RBX1_38_17_curated
ribulose-phosphate 3-epimerase (EC:5.1.3.1)
GWF2_RBX1_38_17_gwf2_scaffold_1446_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

664..948
DNA (285bp) protein (95aa)
id=24609861 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
id=24609861 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_1446_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

963..1415
DNA (453bp) protein (151aa)
id=24609862 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
id=24609862 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_1446_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

1494..2303
DNA (810bp) protein (270aa)
beta-phosphoglucomutase; K01838 beta-phosphoglucomutase [EC:5.4.2.6] id=24609863 bin=RAAC11 species=Sebaldella termitidis genus=Sebaldella taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=RAAC11 organism_group=Unknown_CP
beta-phosphoglucomutase; K01838 beta-phosphoglucomutase [EC:5.4.2.6] Tax=GWF2_RBX1_38_17_curated
beta-phosphoglucomutase
GWF2_RBX1_38_17_gwf2_scaffold_1446_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

2677..3915
DNA (1239bp) protein (413aa)
hypothetical protein id=24609864 bin=RAAC11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RAAC11 organism_group=Unknown_CP
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWF2_RBX1_38_17_gwf2_scaffold_1446_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

4278..6368
DNA (2091bp) protein (697aa)
Chemotaxis sensory transducer id=3227277 bin=GWF2_OP9-related_38_17 species=[Clostridium] stercorarium genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
chemotaxis protein Tax=GWF2_RBX1_38_17_curated
pilJ; protein PilJ
GWF2_RBX1_38_17_gwf2_scaffold_1446_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

6507..7328
DNA (822bp) protein (274aa)
Rhodanese domain protein id=1981531 bin=GWE2_RBX1_39_32 species=Desulfovibrio desulfuricans genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Rhodanese domain-containing protein Tax=GWF2_RBX1_38_17_curated
rhodanese domain-containing protein
GWF2_RBX1_38_17_gwf2_scaffold_1446_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(7579..9669)
DNA (2091bp) protein (697aa)
Methyl-accepting chemotaxis sensory transducer id=1981533 bin=GWE2_RBX1_39_32 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
methyl-accepting chemotaxis sensory transducer; K03406 methyl-accepting chemotaxis protein Tax=GWF2_RBX1_38_17_curated
methyl-accepting chemotaxis sensory transducer
GWF2_RBX1_38_17_gwf2_scaffold_1446_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

10323..10544
DNA (222bp) protein (74aa)
id=1981535 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1981535 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_1446_10
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

10755..11327
DNA (573bp) protein (191aa)
RNA polymerase sigma factor id=1981577 bin=GWE2_RBX1_39_32 species=unknown genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
RNA polymerase sigma factor, sigma-70 family Tax=GWF2_RBX1_38_17_curated
RNA polymerase sigma factor, sigma-70 family
GWF2_RBX1_38_17_gwf2_scaffold_1446_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

11293..11646
DNA (354bp) protein (118aa)
id=1981578 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1981578 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_1446_12
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

11683..12153
DNA (471bp) protein (157aa)
Structural maintenance of chromosomes protein id=1981579 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Structural maintenance of chromosomes protein Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_1446_13
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

12241..13473
DNA (1233bp) protein (411aa)
TPR domain-containing protein id=1981580 bin=GWE2_RBX1_39_32 species=unknown genus=Brachyspira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
TPR domain-containing protein Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_1446_14
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

13550..14467
DNA (918bp) protein (306aa)
Uncharacterized protein id=3227415 bin=GWF2_OP9-related_38_17 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWF2_RBX1_38_17_gwf2_scaffold_1446_15
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

14566..15141
DNA (576bp) protein (192aa)
UPI00020A99FE related cluster id=1981582 bin=GWE2_RBX1_39_32 species=Thermodesulfobium narugense genus=Thermodesulfobium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
rubrerythrin Tax=GWF2_RBX1_38_17_curated
rubrerythrin
GWF2_RBX1_38_17_gwf2_scaffold_1446_16
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(15323..17659)
DNA (2337bp) protein (779aa)
hypothetical protein; K02564 glucosamine-6-phosphate deaminase [EC:3.5.99.6] Tax=GWF2_RBX1_38_17_curated
Glucosamine/galactosamine-6-phosphate isomerase id=1981583 bin=GWE2_RBX1_39_32 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein
GWF2_RBX1_38_17_gwf2_scaffold_1446_17
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

17930..18442
DNA (513bp) protein (171aa)
Putative uncharacterized protein id=1981584 bin=GWE2_RBX1_39_32 species=Sulfurospirillum deleyianum genus=Sulfurospirillum taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWF2_RBX1_38_17_gwf2_scaffold_1446_18
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

18577..19002
DNA (426bp) protein (142aa)
Putative uncharacterized protein id=1981585 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Putative uncharacterized protein Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_1446_19
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

19398..20912
DNA (1515bp) protein (505aa)
oxidoreductase; K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4] Tax=GWF2_RBX1_38_17_curated
Oxidoreductase id=1981586 bin=GWE2_RBX1_39_32 species=Oscillibacter valericigenes genus=Oscillibacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
oxidoreductase
GWF2_RBX1_38_17_gwf2_scaffold_1446_20
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

21255..21974
DNA (720bp) protein (240aa)
id=1981587 bin=GWE2_RBX1_39_32 species=Leptospira vanthielii genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1981587 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_1446_21
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(21971..23098)
DNA (1128bp) protein (376aa)
metC3; cystathionine beta-lyase MetC (EC:4.4.1.8)
Cystathionine beta-lyase id=1777180 bin=GWD2_RBX1-related_39_127 species=unknown genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
cystathionine beta-lyase/cystathionine gamma-synthase Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_1446_22
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(23124..24056)
DNA (933bp) protein (311aa)
cysteine synthase a; K01738 cysteine synthase A [EC:2.5.1.47] Tax=GWF2_RBX1_38_17_curated
Cysteine synthase A id=1777182 bin=GWD2_RBX1-related_39_127 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
cysteine synthase a
GWF2_RBX1_38_17_gwf2_scaffold_1446_23
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(24232..25734)
DNA (1503bp) protein (501aa)
id=1981590 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1981590 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_1446_24
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(25816..27204)
DNA (1389bp) protein (463aa)
capsular polysaccharide biosynthesis protein; K01912 phenylacetate-CoA ligase [EC:6.2.1.30] Tax=GWF2_RBX1_38_17_curated
Capsular polysaccharide biosynthesis protein id=1981591 bin=GWE2_RBX1_39_32 species=Methanohalobium evestigatum genus=Methanohalobium taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
capsular polysaccharide biosynthesis protein
GWF2_RBX1_38_17_gwf2_scaffold_1446_25
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(27226..28704)
DNA (1479bp) protein (493aa)
EpsN protein id=24609885 bin=RAAC11 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=RAAC11 organism_group=Unknown_CP
EpsN protein Tax=GWF2_RBX1_38_17_curated
EpsN protein
GWF2_RBX1_38_17_gwf2_scaffold_1446_26
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(29020..29700)
DNA (681bp) protein (227aa)
id=1981593 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1981593 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_1446_27
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

30112..31014
DNA (903bp) protein (301aa)
Secretion protein HlyD family protein id=1981594 bin=GWE2_RBX1_39_32 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
secretion protein HlyD; K01993 HlyD family secretion protein Tax=GWF2_RBX1_38_17_curated
secretion protein HlyD
GWF2_RBX1_38_17_gwf2_scaffold_1446_28
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

31340..32473
DNA (1134bp) protein (378aa)
id=1981595 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1981595 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_1446_29
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(32521..33588)
DNA (1068bp) protein (356aa)
Radical SAM domain protein id=1981596 bin=GWE2_RBX1_39_32 species=Leptonema illini genus=Leptonema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWF2_RBX1_38_17_gwf2_scaffold_1446_30
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(33594..34676)
DNA (1083bp) protein (361aa)
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1); K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] id=24609890 bin=RAAC11 species=Phascolarctobacterium succinatutens genus=Phascolarctobacterium taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1); K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] Tax=GWF2_RBX1_38_17_curated
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase IspG (EC:1.17.7.1)
Displaying items 1-30 of 34 in total

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