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GWF2_RBX1_38_17_gwf2_scaffold_1344

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Displaying items 1-30 of 41 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF2_RBX1_38_17_gwf2_scaffold_1344_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

158..1186
DNA (1029bp) protein (343aa)
3-deoxy-7-phosphoheptulonate synthase (EC:2.5.1.54); K03856 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] Tax=GWF2_RBX1_38_17_curated
Phospho-2-dehydro-3-deoxyheptonate aldolase (Phospho-2-keto-3-deoxyheptonate aldolase) (DAHP synthetase) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase) id=2168624 bin=GWE2_RBX1_39_32 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
aroG-2; 3-deoxy-7-phosphoheptulonate synthase
GWF2_RBX1_38_17_gwf2_scaffold_1344_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(1183..1713)
DNA (531bp) protein (177aa)
Putative uncharacterized protein id=2168623 bin=GWE2_RBX1_39_32 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Putative uncharacterized protein Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_1344_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(1966..2145)
DNA (180bp) protein (60aa)
id=2168622 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2168622 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_1344_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

2458..3852
DNA (1395bp) protein (465aa)
AMMECR1-domain protein id=2168621 bin=GWE2_RBX1_39_32 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
AMMECR1 domain-containing protein; K06990 Tax=GWF2_RBX1_38_17_curated
AMMECR1 domain-containing protein
GWF2_RBX1_38_17_gwf2_scaffold_1344_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

3869..4294
DNA (426bp) protein (142aa)
Response regulator containing a CheY-like receiver domain and an HD-GYP domain (Fragment) id=2168620 bin=GWE2_RBX1_39_32 species=Hydrogenivirga sp. 128-5-R1-1 genus=Hydrogenivirga taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
PAS/PAC sensor protein Tax=GWF2_RBX1_38_17_curated
PAS/PAC sensor protein
GWF2_RBX1_38_17_gwf2_scaffold_1344_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(4289..5581)
DNA (1293bp) protein (431aa)
hisD; histidinol dehydrogenase HisD (EC:1.1.1.23) Tax=GWF2_RBX1_38_17_curated
hisD; histidinol dehydrogenase HisD (EC:1.1.1.23)
Histidinol dehydrogenase id=2105514 bin=GWD2_RBX1-related_39_127 species=Clostridium acidurici genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWF2_RBX1_38_17_gwf2_scaffold_1344_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

5973..6584
DNA (612bp) protein (204aa)
id=2168618 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2168618 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_1344_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(6641..7975)
DNA (1335bp) protein (445aa)
3-phosphoshikimate 1-carboxyvinyltransferase; K00800 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] Tax=GWF2_RBX1_38_17_curated
3-phosphoshikimate 1-carboxyvinyltransferase id=3113779 bin=GWF2_OP9-related_38_17 species=Bacillus sp. 2_A_57_CT2 genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
3-phosphoshikimate 1-carboxyvinyltransferase
GWF2_RBX1_38_17_gwf2_scaffold_1344_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(7972..8613)
DNA (642bp) protein (214aa)
ATP phosphoribosyltransferase (EC:2.4.2.17) Tax=GWF2_RBX1_38_17_curated
ATP phosphoribosyltransferase (EC:2.4.2.17)
ATP phosphoribosyltransferase id=2168616 bin=GWE2_RBX1_39_32 species=Pseudanabaena sp. PCC 7367 genus=Pseudanabaena taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWF2_RBX1_38_17_gwf2_scaffold_1344_10
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(8613..9482)
DNA (870bp) protein (290aa)
ATP phosphoribosyltransferase regulatory subunit id=2105521 bin=GWD2_RBX1-related_39_127 species=Caldanaerobacter subterraneus genus=Caldanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
HisS2; histidyl-tRNA synthetase; K02502 ATP phosphoribosyltransferase regulatory subunit Tax=GWF2_RBX1_38_17_curated
HisS2; histidyl-tRNA synthetase
GWF2_RBX1_38_17_gwf2_scaffold_1344_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(9593..10735)
DNA (1143bp) protein (381aa)
Two component transcriptional regulator, winged helix family id=2168570 bin=GWE2_RBX1_39_32 species=Halobacteroides halobius genus=Halobacteroides taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain Tax=GWF2_RBX1_38_17_curated
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
GWF2_RBX1_38_17_gwf2_scaffold_1344_12
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(10821..11540)
DNA (720bp) protein (240aa)
Putative uncharacterized protein id=2168567 bin=GWE2_RBX1_39_32 species=uncultured archaeon genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWF2_RBX1_38_17_gwf2_scaffold_1344_13
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(11679..13013)
DNA (1335bp) protein (445aa)
id=2168566 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2168566 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_1344_14
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(13087..17106)
DNA (4020bp) protein (1340aa)
Putative uncharacterized protein id=2168564 bin=GWE2_RBX1_39_32 species=Gloeocapsa sp. PCC 73106 genus=Gloeocapsa taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
FG-GAP repeat-containing protein Tax=GWF2_RBX1_38_17_curated
FG-GAP repeat-containing protein
GWF2_RBX1_38_17_gwf2_scaffold_1344_15
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(17204..18904)
DNA (1701bp) protein (567aa)
hypothetical protein Tax=GWF2_RBX1_38_17_curated
Putative uncharacterized protein id=2168562 bin=GWE2_RBX1_39_32 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein
GWF2_RBX1_38_17_gwf2_scaffold_1344_16
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(18891..19355)
DNA (465bp) protein (155aa)
TadE family protein id=2168560 bin=GWE2_RBX1_39_32 species=Natranaerobius thermophilus genus=Natranaerobius taxon_order=Natranaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
TadE family protein Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_1344_17
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(19725..20150)
DNA (426bp) protein (142aa)
TadE family protein id=2168559 bin=GWE2_RBX1_39_32 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
TadE family protein Tax=GWF2_RBX1_38_17_curated
TadE family protein
GWF2_RBX1_38_17_gwf2_scaffold_1344_18
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(20256..20876)
DNA (621bp) protein (207aa)
Sua5/YciO/YrdC/YwlC family protein id=2105559 bin=GWD2_RBX1-related_39_127 species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
Sua5/YciO/YrdC/YwlC family protein; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein Tax=GWF2_RBX1_38_17_curated
Sua5/YciO/YrdC/YwlC family protein
GWF2_RBX1_38_17_gwf2_scaffold_1344_19
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

21048..22310
DNA (1263bp) protein (421aa)
putative periplasmic protein (DUF2233) id=24610746 bin=RAAC11 species=Sporomusa ovata genus=Sporomusa taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
putative periplasmic protein (DUF2233) Tax=GWF2_RBX1_38_17_curated
Protein of unknown function DUF2233, periplasmic
GWF2_RBX1_38_17_gwf2_scaffold_1344_20
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(22354..23604)
DNA (1251bp) protein (417aa)
acetate kinase; K00925 acetate kinase [EC:2.7.2.1] Tax=GWF2_RBX1_38_17_curated
Acetate kinase id=3113962 bin=GWF2_OP9-related_38_17 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
acetate kinase
GWF2_RBX1_38_17_gwf2_scaffold_1344_21
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(23601..24623)
DNA (1023bp) protein (341aa)
phosphotransacetylase (EC:2.3.1.8); K00625 phosphate acetyltransferase [EC:2.3.1.8] id=24610748 bin=RAAC11 species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
phosphotransacetylase (EC:2.3.1.8); K00625 phosphate acetyltransferase [EC:2.3.1.8] Tax=GWF2_RBX1_38_17_curated
phosphotransacetylase (EC:2.3.1.8)
GWF2_RBX1_38_17_gwf2_scaffold_1344_22
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

25081..25530
DNA (450bp) protein (150aa)
NrdR family transcriptional regulator; K07738 transcriptional repressor NrdR id=24610749 bin=RAAC11 species=unknown genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
NrdR family transcriptional regulator; K07738 transcriptional repressor NrdR Tax=GWF2_RBX1_38_17_curated
NrdR family transcriptional regulator
GWF2_RBX1_38_17_gwf2_scaffold_1344_23
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

25566..28022
DNA (2457bp) protein (819aa)
anaerobic ribonucleoside-triphosphate reductase; K00527 ribonucleoside-triphosphate reductase [EC:1.17.4.2] Tax=GWF2_RBX1_38_17_curated
Anaerobic ribonucleoside-triphosphate reductase id=2184589 bin=GWE2_RBX1_39_32 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
anaerobic ribonucleoside-triphosphate reductase
GWF2_RBX1_38_17_gwf2_scaffold_1344_24
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

28013..28690
DNA (678bp) protein (226aa)
anaerobic ribonucleoside-triphosphate reductase activating protein; K04069 pyruvate formate lyase activating enzyme [EC:1.97.1.4] Tax=GWF2_RBX1_38_17_curated
Anaerobic ribonucleoside-triphosphate reductase activating protein id=3113970 bin=GWF2_OP9-related_38_17 species=Aminobacterium colombiense genus=Aminobacterium taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
anaerobic ribonucleoside-triphosphate reductase activating protein
GWF2_RBX1_38_17_gwf2_scaffold_1344_25
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

28772..29608
DNA (837bp) protein (279aa)
imidazole glycerol phosphate synthase subunit HisF (EC:5.3.1.16); K02500 cyclase [EC:4.1.3.-] Tax=GWF2_RBX1_38_17_curated
imidazole glycerol phosphate synthase subunit HisF (EC:5.3.1.16)
Imidazole glycerol phosphate synthase subunit HisF id=3113972 bin=GWF2_OP9-related_38_17 species=Methanothermococcus okinawensis genus=Methanothermococcus taxon_order=Methanococcales taxon_class=Methanococci phylum=Euryarchaeota tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
GWF2_RBX1_38_17_gwf2_scaffold_1344_26
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(29700..30728)
DNA (1029bp) protein (343aa)
aroG; phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54) Tax=GWF2_RBX1_38_17_curated
aroG; phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase id=3113974 bin=GWF2_OP9-related_38_17 species=Clostridium acidurici genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
GWF2_RBX1_38_17_gwf2_scaffold_1344_27
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(30761..31495)
DNA (735bp) protein (245aa)
Polysaccharide deacetylase family sporulation protein PdaB id=2184593 bin=GWE2_RBX1_39_32 species=unknown genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
polysaccharide deacetylase family sporulation protein PdaB Tax=GWF2_RBX1_38_17_curated
polysaccharide deacetylase family sporulation protein PdaB
GWF2_RBX1_38_17_gwf2_scaffold_1344_28
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(31492..32139)
DNA (648bp) protein (216aa)
Organic radical activating enzyme id=2184594 bin=GWE2_RBX1_39_32 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Radical SAM domain-containing protein Tax=GWF2_RBX1_38_17_curated
Radical SAM domain-containing protein
GWF2_RBX1_38_17_gwf2_scaffold_1344_29
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(32141..34330)
DNA (2190bp) protein (730aa)
ATP-dependent DNA helicase PcrA id=2184595 bin=GWE2_RBX1_39_32 species=Thermoanaerobacterium thermosaccharolyticum genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
ATP-dependent DNA helicase PcrA Tax=GWF2_RBX1_38_17_curated
ATP-dependent DNA helicase PcrA
GWF2_RBX1_38_17_gwf2_scaffold_1344_30
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

34543..35595
DNA (1053bp) protein (351aa)
CCA-adding enzyme id=2184596 bin=GWE2_RBX1_39_32 species=Clostridium sp. ASF502 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
polynucleotide adenylyltransferase Tax=GWF2_RBX1_38_17_curated
polynucleotide adenylyltransferase
Displaying items 1-30 of 41 in total

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