ggKbase home page

GWF2_RBX1_38_17_gwf2_scaffold_707

Search features with annotation key words

Displaying items 1-30 of 66 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF2_RBX1_38_17_gwf2_scaffold_707_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

121..705
DNA (585bp) protein (195aa)
Integrase family protein id=4442829 bin=GWF2_OP9-related_38_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=ACD58 tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
integrase family protein Tax=GWF2_RBX1_38_17_curated
Phage integrase family protein
GWF2_RBX1_38_17_gwf2_scaffold_707_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

881..1315
DNA (435bp) protein (145aa)
DNA-(Apurinic or apyrimidinic site) lyase / pyrimidine dimer DNA glycosylase id=1945442 bin=GWE2_RBX1_39_32 species=Nitrosomonas sp. genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
DNA-(apurinic or apyrimidinic site) lyase / pyrimidine dimer DNA glycosylase Tax=GWF2_RBX1_38_17_curated
DNA-(apurinic or apyrimidinic site) lyase / pyrimidine dimer DNA glycosylase
GWF2_RBX1_38_17_gwf2_scaffold_707_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

1420..3492
DNA (2073bp) protein (691aa)
methyl-accepting chemotaxis protein Tax=GWF2_RBX1_38_17_curated
Methyl-accepting chemotaxis protein id=1945443 bin=GWE2_RBX1_39_32 species=Desulfosporosinus youngiae genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
methyl-accepting chemotaxis sensory transducer with Cache sensor
GWF2_RBX1_38_17_gwf2_scaffold_707_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(3482..5320)
DNA (1839bp) protein (613aa)
para-aminobenzoate synthase subunit I; K03342 para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38] Tax=GWF2_RBX1_38_17_curated
Para-aminobenzoate synthase, subunit I id=1945445 bin=GWE2_RBX1_39_32 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
para-aminobenzoate synthase subunit I
GWF2_RBX1_38_17_gwf2_scaffold_707_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

5368..6735
DNA (1368bp) protein (456aa)
3-isopropylmalate dehydratase (EC:4.2.1.33); K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] Tax=GWF2_RBX1_38_17_curated
3-isopropylmalate dehydratase (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit id=1963378 bin=GWD2_RBX1-related_39_127 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWF2_RBX1_38_17_gwf2_scaffold_707_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

6738..7247
DNA (510bp) protein (170aa)
3-isopropylmalate dehydratase small subunit; K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] Tax=GWF2_RBX1_38_17_curated
3-isopropylmalate dehydratase small subunit id=1945449 bin=GWE2_RBX1_39_32 species=Candidatus Desulforudis audaxviator genus=Candidatus Desulforudis taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
3-isopropylmalate dehydratase small subunit
GWF2_RBX1_38_17_gwf2_scaffold_707_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(7257..8519)
DNA (1263bp) protein (421aa)
Metalloendopeptidase-like membrane protein id=1963372 bin=GWD2_RBX1-related_39_127 species=unknown genus=Thermoanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
peptidase M23 Tax=GWF2_RBX1_38_17_curated
peptidase M23
GWF2_RBX1_38_17_gwf2_scaffold_707_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

8827..9774
DNA (948bp) protein (316aa)
Putative glycosyltransferase id=1945453 bin=GWE2_RBX1_39_32 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
putative glycosyltransferase Tax=GWF2_RBX1_38_17_curated
putative glycosyltransferase
GWF2_RBX1_38_17_gwf2_scaffold_707_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

9771..10991
DNA (1221bp) protein (407aa)
id=4442837 bin=GWF2_OP9-related_38_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
id=4442837 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_707_10
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

11021..12454
DNA (1434bp) protein (478aa)
Cobalamin B12-binding:Radical SAM id=1945456 bin=GWE2_RBX1_39_32 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
methyltransferase Tax=GWF2_RBX1_38_17_curated
methyltransferase
GWF2_RBX1_38_17_gwf2_scaffold_707_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

12549..13478
DNA (930bp) protein (310aa)
Membrane protein, putative id=4442839 bin=GWF2_OP9-related_38_17 species=Dictyoglomus thermophilum genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWF2_RBX1_38_17_gwf2_scaffold_707_12
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

13462..14070
DNA (609bp) protein (203aa)
Methylase involved in ubiquinone/menaquinone biosynthesis id=4442840 bin=GWF2_OP9-related_38_17 species=Opitutaceae bacterium TAV1 genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
methyltransferase type 11 Tax=GWF2_RBX1_38_17_curated
SAM-dependent methyltransferase
GWF2_RBX1_38_17_gwf2_scaffold_707_13
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

14067..15611
DNA (1545bp) protein (515aa)
Putative uncharacterized protein id=4442841 bin=GWF2_OP9-related_38_17 species=Geobacter sp. M18 genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWF2_RBX1_38_17_gwf2_scaffold_707_14
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

15677..17233
DNA (1557bp) protein (519aa)
Putative uncharacterized protein id=1945464 bin=GWE2_RBX1_39_32 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWF2_RBX1_38_17_gwf2_scaffold_707_15
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

17251..18012
DNA (762bp) protein (254aa)
Putative uncharacterized protein id=1945466 bin=GWE2_RBX1_39_32 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
type 11 methyltransferase
GWF2_RBX1_38_17_gwf2_scaffold_707_16
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

18013..18717
DNA (705bp) protein (235aa)
glycosyltransferase; K00729 dolichyl-phosphate beta-glucosyltransferase [EC:2.4.1.117] Tax=GWF2_RBX1_38_17_curated
UDP-glucose--undecaprenyl-phosphate glucosyltransferase id=1945468 bin=GWE2_RBX1_39_32 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
UDP-glucose--undecaprenyl-phosphate glucosyltransferase
GWF2_RBX1_38_17_gwf2_scaffold_707_17
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

18815..19744
DNA (930bp) protein (310aa)
Flp pilus assembly protein CpaB id=1945470 bin=GWE2_RBX1_39_32 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Flp pilus assembly protein CpaB; K02279 pilus assembly protein CpaB Tax=GWF2_RBX1_38_17_curated
Flp pilus assembly protein CpaB
GWF2_RBX1_38_17_gwf2_scaffold_707_18
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

19767..21839
DNA (2073bp) protein (691aa)
type II and III secretion system protein; K02280 pilus assembly protein CpaC id=24610527 bin=RAAC11 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
type II and III secretion system protein; K02280 pilus assembly protein CpaC Tax=GWF2_RBX1_38_17_curated
type II and III secretion system protein
GWF2_RBX1_38_17_gwf2_scaffold_707_19
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

21941..23131
DNA (1191bp) protein (397aa)
response regulator receiver protein id=1945474 bin=GWE2_RBX1_39_32 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
response regulator receiver protein; K02282 pilus assembly protein CpaE Tax=GWF2_RBX1_38_17_curated
response regulator receiver protein
GWF2_RBX1_38_17_gwf2_scaffold_707_20
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

23145..24779
DNA (1635bp) protein (545aa)
Type II secretion system protein E id=1945476 bin=GWE2_RBX1_39_32 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
type II secretion system protein E; K02283 pilus assembly protein CpaF Tax=GWF2_RBX1_38_17_curated
type II secretion system protein E
GWF2_RBX1_38_17_gwf2_scaffold_707_21
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

24797..25762
DNA (966bp) protein (322aa)
Type II secretion system F domain protein id=1945512 bin=GWE2_RBX1_39_32 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
type II secretion system F domain protein; K12510 tight adherence protein B Tax=GWF2_RBX1_38_17_curated
type II secretion system F domain protein
GWF2_RBX1_38_17_gwf2_scaffold_707_22
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

25785..26714
DNA (930bp) protein (310aa)
Type II secretion system F domain protein id=1945513 bin=GWE2_RBX1_39_32 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
type II secretion system F domain-containing protein; K12511 tight adherence protein C Tax=GWF2_RBX1_38_17_curated
type II secretion system F domain-containing protein
GWF2_RBX1_38_17_gwf2_scaffold_707_23
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

26745..27848
DNA (1104bp) protein (368aa)
id=1945515 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1945515 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_707_24
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

27895..28407
DNA (513bp) protein (171aa)
HAD superfamily (Subfamily IIIA) phosphatase, TIGR01668 id=1945517 bin=GWE2_RBX1_39_32 species=Clostridium cellulolyticum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
HAD superfamily phosphatase; K07015 Tax=GWF2_RBX1_38_17_curated
HAD superfamily phosphatase
GWF2_RBX1_38_17_gwf2_scaffold_707_25
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

28410..28886
DNA (477bp) protein (159aa)
id=1945519 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1945519 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_707_26
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

29142..31205
DNA (2064bp) protein (688aa)
Methyl-accepting chemotaxis sensory transducer id=1945520 bin=GWE2_RBX1_39_32 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
methyl-accepting chemotaxis sensory transducer Tax=GWF2_RBX1_38_17_curated
methyl-accepting chemotaxis sensory transducer
GWF2_RBX1_38_17_gwf2_scaffold_707_27
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

31592..32848
DNA (1257bp) protein (419aa)
adenylosuccinate synthetase (EC:6.3.4.4); K01939 adenylosuccinate synthase [EC:6.3.4.4] Tax=GWF2_RBX1_38_17_curated
adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase id=1963309 bin=GWD2_RBX1-related_39_127 species=Bifidobacterium animalis genus=Bifidobacterium taxon_order=Bifidobacteriales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWF2_RBX1_38_17_gwf2_scaffold_707_trna_1
unknown

Not on your lists

32935..33007
DNA (73bp)
transferRNA
GWF2_RBX1_38_17_gwf2_scaffold_707_28
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

33250..34023
DNA (774bp) protein (258aa)
SPFH domain, Band 7 family protein id=1783068 bin=GWD2_RBX1-related_39_127 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
spfh domain, band 7 family protein Tax=GWF2_RBX1_38_17_curated
spfh domain, band 7 family protein
GWF2_RBX1_38_17_gwf2_scaffold_707_29
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

34400..35779
DNA (1380bp) protein (460aa)
MATE efflux family protein id=1945526 bin=GWE2_RBX1_39_32 species=Alkaliphilus oremlandii genus=Alkaliphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
MATE efflux family protein Tax=GWF2_RBX1_38_17_curated
MATE efflux family protein
Displaying items 1-30 of 66 in total

View Taxonomy