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GWF2_RBX1_38_17_gwf2_scaffold_2938

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF2_RBX1_38_17_gwf2_scaffold_2938_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(80..1969)
DNA (1890bp) protein (630aa)
type IIs modification methyltransferase; K06223 DNA adenine methylase [EC:2.1.1.72] Tax=GWF2_RBX1_38_17_curated
dpnM; modification methylase DpnIIA (EC:2.1.1.72)
Type IIs modification methyltransferase id=2145140 bin=GWE2_RBX1_39_32 species=unknown genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWF2_RBX1_38_17_gwf2_scaffold_2938_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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2704..5466
DNA (2763bp) protein (921aa)
isoleucyl-tRNA synthetase; K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] Tax=GWF2_RBX1_38_17_curated
Isoleucine--tRNA ligase id=2145144 bin=GWE2_RBX1_39_32 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
isoleucyl-tRNA synthetase
GWF2_RBX1_38_17_gwf2_scaffold_2938_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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5529..6446
DNA (918bp) protein (306aa)
PfkB domain protein id=2145147 bin=GWE2_RBX1_39_32 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
PfkB domain-containing protein Tax=GWF2_RBX1_38_17_curated
ribokinase-like protein
GWF2_RBX1_38_17_gwf2_scaffold_2938_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

6559..7959
DNA (1401bp) protein (467aa)
adenosylhomocysteinase; K01251 adenosylhomocysteinase [EC:3.3.1.1] Tax=GWF2_RBX1_38_17_curated
adenosylhomocysteinase (EC:3.3.1.1)
Adenosylhomocysteinase id=2145150 bin=GWE2_RBX1_39_32 species=Denitrovibrio acetiphilus genus=Denitrovibrio taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWF2_RBX1_38_17_gwf2_scaffold_2938_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

7989..8552
DNA (564bp) protein (188aa)
biotin--acetyl-CoA-carboxylase ligase (EC:6.3.4.15); K03524 BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] Tax=GWF2_RBX1_38_17_cu
biotin--acetyl-CoA-carboxylase ligase (EC:6.3.4.15)
Biotin--acetyl-CoA-carboxylase ligase id=2145153 bin=GWE2_RBX1_39_32 species=Alkaliphilus oremlandii genus=Alkaliphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWF2_RBX1_38_17_gwf2_scaffold_2938_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

8603..8971
DNA (369bp) protein (123aa)
chorismate mutase; K06208 chorismate mutase [EC:5.4.99.5] Tax=GWF2_RBX1_38_17_curated
Chorismate mutase id=1994039 bin=GWD2_RBX1-related_39_127 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
chorismate mutase
GWF2_RBX1_38_17_gwf2_scaffold_2938_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

8998..9867
DNA (870bp) protein (290aa)
prephenate dehydrogenase; K04517 prephenate dehydrogenase [EC:1.3.1.12] Tax=GWF2_RBX1_38_17_curated
Prephenate dehydrogenase id=1994044 bin=GWD2_RBX1-related_39_127 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
prephenate dehydrogenase
GWF2_RBX1_38_17_gwf2_scaffold_2938_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

9904..10122
DNA (219bp) protein (73aa)
id=2145159 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2145159 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_2938_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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10141..10788
DNA (648bp) protein (216aa)
Uncharacterized protein id=2145160 bin=GWE2_RBX1_39_32 species=Tepidanaerobacter acetatoxydans genus=Tepidanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
metV; 5,10-methylene-tetrahydrofolate reductase subunit MetV
GWF2_RBX1_38_17_gwf2_scaffold_2938_10
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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10815..11699
DNA (885bp) protein (295aa)
Methylenetetrahydrofolate reductase id=2145162 bin=GWE2_RBX1_39_32 species=Methanomethylovorans hollandica genus=Methanomethylovorans taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
5,10-methylenetetrahydrofolate reductase Tax=GWF2_RBX1_38_17_curated
5,10-methylenetetrahydrofolate reductase
GWF2_RBX1_38_17_gwf2_scaffold_2938_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists


11760..12134
DNA (375bp) protein (125aa)
50S ribosomal protein L21 id=3964772 bin=GWF2_OP9-related_38_17 species=Oribacterium sp. oral taxon 078 genus=Oribacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
LSU ribosomal protein L21P Tax=GWF2_RBX1_38_17_curated
50S ribosomal protein L21
GWF2_RBX1_38_17_gwf2_scaffold_2938_12
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists


12207..12461
DNA (255bp) protein (85aa)
50S ribosomal protein L27 id=1994061 bin=GWD2_RBX1-related_39_127 species=unknown genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
rpmA; 50S ribosomal protein L27; K02899 large subunit ribosomal protein L27 Tax=GWF2_RBX1_38_17_curated
50S ribosomal protein L27
GWF2_RBX1_38_17_gwf2_scaffold_2938_13
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

12539..13579
DNA (1041bp) protein (347aa)
GTPase obg id=1994066 bin=GWD2_RBX1-related_39_127 species=Aquifex aeolicus genus=Aquifex taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GTP1/OBG sub domain-containing protein; K03979 GTP-binding protein Tax=GWF2_RBX1_38_17_curated
GTP1/OBG sub domain-containing protein
GWF2_RBX1_38_17_gwf2_scaffold_2938_14
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

13623..14396
DNA (774bp) protein (258aa)
glutamate 5-kinase (EC:2.7.2.11); K00931 glutamate 5-kinase [EC:2.7.2.11] Tax=GWF2_RBX1_38_17_curated
glutamate 5-kinase (EC:2.7.2.11)
Glutamate 5-kinase id=2145167 bin=GWE2_RBX1_39_32 species=Clostridium carboxidivorans genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWF2_RBX1_38_17_gwf2_scaffold_2938_15
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

14410..15657
DNA (1248bp) protein (416aa)
Gamma-glutamyl phosphate reductase id=1994074 bin=GWD2_RBX1-related_39_127 species=Desulfotomaculum gibsoniae genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
gamma-glutamyl phosphate reductase Tax=GWF2_RBX1_38_17_curated
gamma-glutamyl phosphate reductase
GWF2_RBX1_38_17_gwf2_scaffold_2938_16
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

15792..16790
DNA (999bp) protein (333aa)
UDP-glucose-4-epimerase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] Tax=GWF2_RBX1_38_17_curated
UDP-glucose-4-epimerase id=2145172 bin=GWE2_RBX1_39_32 species=Clostridium clariflavum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
UDP-glucose-4-epimerase
GWF2_RBX1_38_17_gwf2_scaffold_2938_17
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

16780..17844
DNA (1065bp) protein (355aa)
mannose-1-phosphate guanylyltransferase (EC:2.7.7.22 5.3.1.8); K00971 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] Tax=GWF2_RBX1_38_17_curated
mannose-1-phosphate guanylyltransferase (EC:2.7.7.22 5.3.1.8)
Mannose-1-phosphate guanylyltransferase (GDP); mannose-6-phosphate isomerase, type 2 id=2145174 bin=GWE2_RBX1_39_32 species=Mahella australiensis genus=Mahella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWF2_RBX1_38_17_gwf2_scaffold_2938_18
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(17932..18762)
DNA (831bp) protein (277aa)
ABC-type branched-E47chain amino acid transporter, periplasmic binding protein id=2145176 bin=GWE2_RBX1_39_32 species=Desulfobacula toluolica genus=Desulfobacula taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
branched-chain amino acid ABC transporter periplasmic protein Tax=GWF2_RBX1_38_17_curated
branched-chain amino acid ABC transporter periplasmic protein
GWF2_RBX1_38_17_gwf2_scaffold_2938_19
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(18763..19203)
DNA (441bp) protein (147aa)
ABC-type branched-E47chain amino acid transporter, periplasmic binding protein id=2145176 bin=GWE2_RBX1_39_32 species=Desulfobacula toluolica genus=Desulfobacula taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
branched-chain amino acid ABC transporter substrate-binding protein Tax=GWF2_RBX1_38_17_curated
branched-chain amino acid ABC transporter substrate-binding protein
GWF2_RBX1_38_17_gwf2_scaffold_2938_20
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(19287..21467)
DNA (2181bp) protein (727aa)
methyl-accepting chemotaxis protein id=24611018 bin=RAAC11 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC11 organism_group=Unknown_CP
methyl-accepting chemotaxis protein Tax=GWF2_RBX1_38_17_curated
methyl-accepting chemotaxis protein
Displaying 20 items

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