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GWF2_RBX1_38_17_gwf2_scaffold_7324

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF2_RBX1_38_17_gwf2_scaffold_7324_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(3..275)
DNA (273bp) protein (91aa)
glycoside hydrolase family protein id=24609378 bin=RAAC11 species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
glycoside hydrolase family protein Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_7324_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(504..1481)
DNA (978bp) protein (326aa)
regulatory protein, DeoR id=24609377 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
regulatory protein, DeoR Tax=GWF2_RBX1_38_17_curated
regulatory protein, DeoR
GWF2_RBX1_38_17_gwf2_scaffold_7324_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(1474..1875)
DNA (402bp) protein (134aa)
UPF0047 protein Bsu YugU id=1978310 bin=GWD2_RBX1-related_39_127 species=Caloramator australicus genus=Caloramator taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
secondary thiamine-phosphate synthase enzyme Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWF2_RBX1_38_17_gwf2_scaffold_7324_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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2479..3621
DNA (1143bp) protein (381aa)
Glycosyl transferase family 2 id=2105461 bin=GWE2_RBX1_39_32 species=Clostridium papyrosolvens genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
glycosyl transferase family protein Tax=GWF2_RBX1_38_17_curated
glycosyl transferase family protein
GWF2_RBX1_38_17_gwf2_scaffold_7324_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(3745..4317)
DNA (573bp) protein (191aa)
coaE; dephospho-CoA kinase (EC:2.7.1.24); K00859 dephospho-CoA kinase [EC:2.7.1.24] Tax=GWF2_RBX1_38_17_curated
coaE; dephospho-CoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase id=2105460 bin=GWE2_RBX1_39_32 species=Thermotoga lettingae genus=Thermotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWF2_RBX1_38_17_gwf2_scaffold_7324_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(4339..5718)
DNA (1380bp) protein (460aa)
amidophosphoribosyltransferase; K00764 amidophosphoribosyltransferase [EC:2.4.2.14] Tax=GWF2_RBX1_38_17_curated
Amidophosphoribosyltransferase id=4465521 bin=GWF2_OP9-related_38_17 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
amidophosphoribosyltransferase
GWF2_RBX1_38_17_gwf2_scaffold_7324_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(5735..7975)
DNA (2241bp) protein (747aa)
PurL2; phosphoribosylformylglycinamidine synthase II; K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] Tax=GWF2_RBX1_38_17_curated
Phosphoribosylformylglycinamidine synthase 2 id=4465522 bin=GWF2_OP9-related_38_17 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
PurL2; phosphoribosylformylglycinamidine synthase II
GWF2_RBX1_38_17_gwf2_scaffold_7324_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(8004..8606)
DNA (603bp) protein (201aa)
nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:2.7.7.18); K00969 nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] Tax=GWF2_RBX1_38_17_curated
nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:2.7.7.18)
Probable nicotinate-nucleotide adenylyltransferase id=2105430 bin=GWE2_RBX1_39_32 species=Aminobacterium colombiense genus=Aminobacterium taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWF2_RBX1_38_17_gwf2_scaffold_7324_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(8617..9612)
DNA (996bp) protein (332aa)
rfbB2; dTDP-glucose 4,6-dehydratase RfbB2 (EC:4.2.1.46); K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] Tax=GWF2_RBX1_38_17_curated
rfbB2; dTDP-glucose 4,6-dehydratase RfbB2 (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase RfbB1 id=2105427 bin=GWE2_RBX1_39_32 species=Methanobrevibacter ruminantium genus=Methanobrevibacter taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWF2_RBX1_38_17_gwf2_scaffold_7324_10
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(9853..10233)
DNA (381bp) protein (127aa)
hydrogenase transcriptional regulator hupR1 id=24609369 bin=RAAC11 species=Vibrio cholerae genus=Vibrio taxon_order=Vibrionales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RAAC11 organism_group=Unknown_CP
hydrogenase transcriptional regulator hupR1 Tax=GWF2_RBX1_38_17_curated
two-component regulatory system, response regulator protein (Hydrogenase transcriptional regulatory protein hupR1)
Displaying 10 items

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