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GWF2_RBX1_38_17_gwf2_scaffold_4666

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF2_RBX1_38_17_gwf2_scaffold_4666_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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146..358
DNA (213bp) protein (71aa)
id=1832834 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1832834 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_4666_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(435..986)
DNA (552bp) protein (184aa)
pyruvoyl-dependent arginine decarboxylase; K02626 arginine decarboxylase [EC:4.1.1.19] Tax=GWF2_RBX1_38_17_curated
Probable pyruvoyl-dependent arginine decarboxylase id=1960251 bin=GWD2_RBX1-related_39_127 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
pyruvoyl-dependent arginine decarboxylase
GWF2_RBX1_38_17_gwf2_scaffold_4666_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(1253..1813)
DNA (561bp) protein (187aa)
id=4219553 bin=GWF2_OP9-related_38_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
id=4219553 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_4666_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(1813..2739)
DNA (927bp) protein (309aa)
sppA; serine protease; K04773 protease IV [EC:3.4.21.-] Tax=GWF2_RBX1_38_17_curated
Signal peptide peptidase SppA, 36K type id=1832839 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
sppA; serine protease
GWF2_RBX1_38_17_gwf2_scaffold_4666_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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3092..3544
DNA (453bp) protein (151aa)
Response regulator rcp1 id=1832841 bin=GWE2_RBX1_39_32 species=Methylomicrobium alcaliphilum genus=Methylomicrobium taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
rcp; response regulator rcp1 Tax=GWF2_RBX1_38_17_curated
rcp; response regulator rcp1
GWF2_RBX1_38_17_gwf2_scaffold_4666_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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3771..4205
DNA (435bp) protein (145aa)
Two-component response regulator id=4219556 bin=GWF2_OP9-related_38_17 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
response regulator receiver protein Tax=GWF2_RBX1_38_17_curated
response regulator receiver protein
GWF2_RBX1_38_17_gwf2_scaffold_4666_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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4272..5915
DNA (1644bp) protein (548aa)
Putative PAS sensor signal transduction histidine kinase id=1832845 bin=GWE2_RBX1_39_32 species=Methanocella conradii genus=Methanocella taxon_order=Methanocellales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
putative PAS sensor signal transduction histidine kinase Tax=GWF2_RBX1_38_17_curated
PAS sensor signal transduction histidine kinase
GWF2_RBX1_38_17_gwf2_scaffold_4666_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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6000..6872
DNA (873bp) protein (291aa)
PAS fold family id=1832847 bin=GWE2_RBX1_39_32 species=unknown genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
PAS sensor, signal transduction histidine kinase Tax=GWF2_RBX1_38_17_curated
PAS sensor, signal transduction histidine kinase
GWF2_RBX1_38_17_gwf2_scaffold_4666_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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7135..7683
DNA (549bp) protein (183aa)
id=1832848 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1832848 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_4666_10
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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7749..8414
DNA (666bp) protein (222aa)
Two-component hybrid sensor and regulator id=1960194 bin=GWD2_RBX1-related_39_127 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
sensor protein Tax=GWF2_RBX1_38_17_curated
sensor protein
GWF2_RBX1_38_17_gwf2_scaffold_4666_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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8790..10745
DNA (1956bp) protein (652aa)
CheT id=1832850 bin=GWE2_RBX1_39_32 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
cheT; protein CheT; K03406 methyl-accepting chemotaxis protein Tax=GWF2_RBX1_38_17_curated
cheT; protein CheT
GWF2_RBX1_38_17_gwf2_scaffold_4666_12
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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10922..11446
DNA (525bp) protein (175aa)
CheW4: chemotaxis protein CheW id=4219562 bin=GWF2_OP9-related_38_17 species=Desulfobacula toluolica genus=Desulfobacula taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
cheW4; chemotaxis protein CheW CheW4 Tax=GWF2_RBX1_38_17_curated
cheW4; chemotaxis protein CheW CheW4
GWF2_RBX1_38_17_gwf2_scaffold_4666_13
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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11711..13327
DNA (1617bp) protein (539aa)
phosphoenolpyruvate carboxykinase (ATP); K01610 phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] Tax=GWF2_RBX1_38_17_curated
Phosphoenolpyruvate carboxykinase (ATP) id=4219563 bin=GWF2_OP9-related_38_17 species=MEL_A1 genus=MEL_A1 taxon_order=MEL_A1 taxon_class=MEL_A1 phylum=Melainabacteria tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
phosphoenolpyruvate carboxykinase (ATP)
GWF2_RBX1_38_17_gwf2_scaffold_4666_trna_1
unknown

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13529..13615
DNA (87bp)
transferRNA
GWF2_RBX1_38_17_gwf2_scaffold_4666_14
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(13812..13997)
DNA (186bp) protein (62aa)
id=1832856 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1832856 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_4666_15
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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14380..14748
DNA (369bp) protein (123aa)
type I restriction-modification system methyltransferase subunit; K03427 type I restriction enzyme M protein [EC:2.1.1.72] Tax=GWF2_RBX1_38_17_curated
DNA-methyltransferase, type I restriction-modification enzyme subunit M id=1832877 bin=GWE2_RBX1_39_32 species=unknown genus=Maribacter taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
DNA-methyltransferase, type I restriction-modification enzyme subunit M
GWF2_RBX1_38_17_gwf2_scaffold_4666_16
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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14801..15160
DNA (360bp) protein (120aa)
Fic family toxin-antitoxin system id=1832878 bin=GWE2_RBX1_39_32 species=Sphingobacterium spiritivorum genus=Sphingobacterium taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
KilA-N, DNA-binding domain-containing protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
Displaying 17 items

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