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GWF2_RBX1_38_17_gwf2_scaffold_459

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Displaying items 1-30 of 61 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF2_RBX1_38_17_gwf2_scaffold_459_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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3..911
DNA (909bp) protein (303aa)
Putative uncharacterized protein id=4212554 bin=GWF2_OP9-related_38_17 species=Chitinophaga pinensis genus=Chitinophaga taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWF2_RBX1_38_17_gwf2_scaffold_459_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

927..1253
DNA (327bp) protein (109aa)
id=1860067 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1860067 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_459_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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1287..6401
DNA (5115bp) protein (1705aa)
Putative uncharacterized protein id=1860068 bin=GWE2_RBX1_39_32 species=Methanosarcina barkeri genus=Methanosarcina taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWF2_RBX1_38_17_gwf2_scaffold_459_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

6426..6749
DNA (324bp) protein (108aa)
id=1860071 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1860071 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_459_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

6841..7488
DNA (648bp) protein (216aa)
id=1860072 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1860072 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_459_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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7767..10097
DNA (2331bp) protein (777aa)
Multi-sensor signal transduction histidine kinase id=4212559 bin=GWF2_OP9-related_38_17 species=Candidatus Desulforudis audaxviator genus=Candidatus Desulforudis taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
multi-sensor signal transduction histidine kinase Tax=GWF2_RBX1_38_17_curated
multi-sensor signal transduction histidine kinase
GWF2_RBX1_38_17_gwf2_scaffold_459_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

10261..11034
DNA (774bp) protein (258aa)
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit id=4212560 bin=GWF2_OP9-related_38_17 species=Clostridiaceae bacterium L21-TH-D2 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
oxidoreductase FAD/NAD(P)-binding domain-containing protein; K02823 dihydroorotate dehydrogenase electron transfer subunit Tax=GWF2_RBX1_38_17_curated
oxidoreductase FAD/NAD(P)-binding domain-containing protein
GWF2_RBX1_38_17_gwf2_scaffold_459_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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11240..11638
DNA (399bp) protein (133aa)
histidine kinase id=24608655 bin=RAAC11 species=Rhodonellum psychrophilum genus=Rhodonellum taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=RAAC11 organism_group=Unknown_CP
histidine kinase Tax=GWF2_RBX1_38_17_curated
histidine kinase
GWF2_RBX1_38_17_gwf2_scaffold_459_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(11671..12282)
DNA (612bp) protein (204aa)
Radical SAM domain protein id=4212562 bin=GWF2_OP9-related_38_17 species=Desulfotomaculum ruminis genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
radical SAM protein Tax=GWF2_RBX1_38_17_curated
radical SAM protein
GWF2_RBX1_38_17_gwf2_scaffold_459_10
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(12285..12971)
DNA (687bp) protein (229aa)
cytidylate kinase; K00945 cytidylate kinase [EC:2.7.4.14] Tax=GWF2_RBX1_38_17_curated
Cytidylate kinase id=1860087 bin=GWE2_RBX1_39_32 species=Clostridium botulinum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
cytidylate kinase
GWF2_RBX1_38_17_gwf2_scaffold_459_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(12968..13978)
DNA (1011bp) protein (337aa)
Radical SAM domain protein; K04069 pyruvate formate lyase activating enzyme [EC:1.97.1.4] id=24608658 bin=RAAC11 species=Thermodesulfobium narugense genus=Thermodesulfobium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
Radical SAM domain protein; K04069 pyruvate formate lyase activating enzyme [EC:1.97.1.4] Tax=GWF2_RBX1_38_17_curated
Radical SAM domain protein
GWF2_RBX1_38_17_gwf2_scaffold_459_12
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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14209..15066
DNA (858bp) protein (286aa)
Shikimate dehydrogenase id=4212565 bin=GWF2_OP9-related_38_17 species=Halobacteroides halobius genus=Halobacteroides taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
shikimate 5-dehydrogenase Tax=GWF2_RBX1_38_17_curated
shikimate 5-dehydrogenase
GWF2_RBX1_38_17_gwf2_scaffold_459_13
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(15296..15412)
DNA (117bp) protein (39aa)
id=1860096 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1860096 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_459_14
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

15621..16130
DNA (510bp) protein (170aa)
ThiJ/PfpI domain-containing protein; K05520 protease I [EC:3.2.-.-] Tax=GWF2_RBX1_38_17_curated
ThiJ/PfpI domain-containing protein id=1860098 bin=GWE2_RBX1_39_32 species=unknown genus=Thermodesulfobacterium taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
ThiJ/PfpI domain-containing protein
GWF2_RBX1_38_17_gwf2_scaffold_459_15
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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16170..17561
DNA (1392bp) protein (464aa)
Two component, sigma54 specific, transcriptional regulator, Fis family id=1860102 bin=GWE2_RBX1_39_32 species=Alkaliphilus metalliredigens genus=Alkaliphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
two component sigma54 specific Fis family transcriptional regulator Tax=GWF2_RBX1_38_17_curated
two component sigma54 specific Fis family transcriptional regulator
GWF2_RBX1_38_17_gwf2_scaffold_459_16
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

17845..18297
DNA (453bp) protein (151aa)
Response regulator receiver protein id=1860107 bin=GWE2_RBX1_39_32 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
response regulator receiver protein Tax=GWF2_RBX1_38_17_curated
response regulator receiver protein
GWF2_RBX1_38_17_gwf2_scaffold_459_17
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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18491..19876
DNA (1386bp) protein (462aa)
Radical SAM domain protein id=1860111 bin=GWE2_RBX1_39_32 species=Archaeoglobus profundus genus=Archaeoglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
radical SAM protein Tax=GWF2_RBX1_38_17_curated
radical SAM protein
GWF2_RBX1_38_17_gwf2_scaffold_459_18
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

19891..20517
DNA (627bp) protein (209aa)
Uncharacterized protein id=1860114 bin=GWE2_RBX1_39_32 species=unknown genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
N-acetyltransferase GCN5 Tax=GWF2_RBX1_38_17_curated
acetyltransferase family protein
GWF2_RBX1_38_17_gwf2_scaffold_459_19
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

20520..21875
DNA (1356bp) protein (452aa)
Fe-S oxidoreductase id=4212609 bin=GWF2_OP9-related_38_17 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
Fe-S oxidoreductase Tax=GWF2_RBX1_38_17_curated
Fe-S oxidoreductase
GWF2_RBX1_38_17_gwf2_scaffold_459_20
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

21909..23972
DNA (2064bp) protein (688aa)
signal transduction histidine kinase; K02482 two-component system, NtrC family, sensor kinase [EC:2.7.13.3] Tax=GWF2_RBX1_38_17_curated
Two-component sensor kinase id=2030971 bin=GWD2_RBX1-related_39_127 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
signal transduction histidine kinase
GWF2_RBX1_38_17_gwf2_scaffold_459_21
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

24107..25195
DNA (1089bp) protein (363aa)
peptidase M29, aminopeptidase II; K01269 aminopeptidase [EC:3.4.11.-] Tax=GWF2_RBX1_38_17_curated
Peptidase M29, aminopeptidase II id=1860152 bin=GWE2_RBX1_39_32 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
peptidase M29, aminopeptidase II
GWF2_RBX1_38_17_gwf2_scaffold_459_22
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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25205..26104
DNA (900bp) protein (300aa)
Thioredoxin reductase id=1860154 bin=GWE2_RBX1_39_32 species=Methanomethylovorans hollandica genus=Methanomethylovorans taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
thioredoxin-disulfide reductase Tax=GWF2_RBX1_38_17_curated
thioredoxin-disulfide reductase
GWF2_RBX1_38_17_gwf2_scaffold_459_23
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

26677..27063
DNA (387bp) protein (129aa)
Response regulator containing a CheY-like receiver domain and a GGDEF domain id=4212626 bin=GWF2_OP9-related_38_17 species=Thermanaerovibrio velox genus=Thermanaerovibrio taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
response regulator receiver protein Tax=GWF2_RBX1_38_17_curated
response regulator receiver protein
GWF2_RBX1_38_17_gwf2_scaffold_459_24
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(27069..30239)
DNA (3171bp) protein (1057aa)
SNF2-related protein id=1860158 bin=GWE2_RBX1_39_32 species=MEL_C2 genus=MEL_C2 taxon_order=MEL_C2 taxon_class=MEL_C2 phylum=Melainabacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
putative DEAD/DEAH box helicase Tax=GWF2_RBX1_38_17_curated
putative DEAD/DEAH box helicase
GWF2_RBX1_38_17_gwf2_scaffold_459_25
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

30842..32548
DNA (1707bp) protein (569aa)
Type II secretion system protein E (GspE) id=2030960 bin=GWD2_RBX1-related_39_127 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
type II secretion system protein E (GspE); K02652 type IV pilus assembly protein PilB Tax=GWF2_RBX1_38_17_curated
type II secretion system protein E (GspE)
GWF2_RBX1_38_17_gwf2_scaffold_459_26
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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32572..33783
DNA (1212bp) protein (404aa)
Probable type 4 fimbrial assembly protein (PilC) id=1860162 bin=GWE2_RBX1_39_32 species=Desulfotalea psychrophila genus=Desulfotalea taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
type 4 fimbrial assembly protein (PilC); K02653 type IV pilus assembly protein PilC Tax=GWF2_RBX1_38_17_curated
type 4 fimbrial assembly protein (PilC)
GWF2_RBX1_38_17_gwf2_scaffold_459_27
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

33928..34347
DNA (420bp) protein (140aa)
Pilin (Bacterial filament) id=1860164 bin=GWE2_RBX1_39_32 species=Pseudanabaena biceps genus=Pseudanabaena taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
pilA; pilin; K02650 type IV pilus assembly protein PilA Tax=GWF2_RBX1_38_17_curated
pilA; pilin
GWF2_RBX1_38_17_gwf2_scaffold_459_28
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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34484..35005
DNA (522bp) protein (174aa)
Type IV fimbrial biogenesis protein FimT id=1860166 bin=GWE2_RBX1_39_32 species=Halomonas sp. HAL1 genus=Halomonas taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Type IV fimbrial biogenesis protein FimT Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_459_29
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

35023..35514
DNA (492bp) protein (164aa)
id=1860168 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1860168 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_459_30
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

35516..37105
DNA (1590bp) protein (530aa)
id=1860169 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1860169 Tax=GWF2_RBX1_38_17_curated
Displaying items 1-30 of 61 in total

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