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GWF2_RBX1_38_17_gwf2_scaffold_173

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Displaying items 1-30 of 123 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF2_RBX1_38_17_gwf2_scaffold_173_trna_4
unknown

Not on your lists

comp(154..226)
DNA (73bp)
transferRNA
GWF2_RBX1_38_17_gwf2_scaffold_173_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(984..1274)
DNA (291bp) protein (97aa)
Putative uncharacterized protein id=2028531 bin=GWE2_Bacteroidetes_40_63 species=Finegoldia magna genus=Finegoldia taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Bacteroidetes_40_63 organism_group=Bacteroidetes organism_desc=Good
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWF2_RBX1_38_17_gwf2_scaffold_173_trna_3
unknown

Not on your lists

comp(3908..3980)
DNA (73bp)
transferRNA
GWF2_RBX1_38_17_gwf2_scaffold_173_trna_2
unknown

Not on your lists

comp(4063..4136)
DNA (74bp)
transferRNA
GWF2_RBX1_38_17_gwf2_scaffold_173_16S_1
unknown

Not on your lists

comp(4331..5855)
DNA (1525bp)
GWF2_RBX1_38_17_gwf2_scaffold_173_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(4425..4685)
DNA (261bp) protein (87aa)
hypothetical protein id=24611064 bin=RAAC11 species=Actinomyces odontolyticus genus=Actinomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RAAC11 organism_group=Unknown_CP
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWF2_RBX1_38_17_gwf2_scaffold_173_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(6518..7480)
DNA (963bp) protein (321aa)
hypothetical protein id=24609332 bin=RAAC11 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RAAC11 organism_group=Unknown_CP
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWF2_RBX1_38_17_gwf2_scaffold_173_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(8115..8252)
DNA (138bp) protein (46aa)
id=1750269 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1750269 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_173_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(9586..9813)
DNA (228bp) protein (76aa)
MS156, putative transposase id=3503675 bin=GWF2_OP9-related_38_17 species=Microscilla sp. PRE1 genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
transposase Tax=GWF2_RBX1_38_17_curated
transposase
GWF2_RBX1_38_17_gwf2_scaffold_173_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(9907..11379)
DNA (1473bp) protein (491aa)
ADP-glucose type glycogen/starch synthase (EC:2.4.1.21); K00703 starch synthase [EC:2.4.1.21] Tax=GWF2_RBX1_38_17_curated
ADP-glucose type glycogen/starch synthase (EC:2.4.1.21)
Glycogen synthase id=1808701 bin=GWD2_RBX1-related_39_127 species=Syntrophothermus lipocalidus genus=Syntrophothermus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWF2_RBX1_38_17_gwf2_scaffold_173_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(11582..11893)
DNA (312bp) protein (104aa)
Isoamylase N-terminal domain protein id=1750265 bin=GWE2_RBX1_39_32 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
glycoside hydrolase family protein Tax=GWF2_RBX1_38_17_curated
glycoside hydrolase family protein
GWF2_RBX1_38_17_gwf2_scaffold_173_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(11925..12956)
DNA (1032bp) protein (344aa)
galactose-1-phosphate uridylyltransferase (EC:2.7.7.12); K00965 UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] Tax=GWF2_RBX1_38_17_curated
galactose-1-phosphate uridylyltransferase (EC:2.7.7.12)
Galactose-1-phosphate uridylyltransferase id=1750263 bin=GWE2_RBX1_39_32 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWF2_RBX1_38_17_gwf2_scaffold_173_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

13304..14158
DNA (855bp) protein (285aa)
Site-determining protein id=1750261 bin=GWE2_RBX1_39_32 species=Alkaliphilus oremlandii genus=Alkaliphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
cobyrinic acid ac-diamide synthase; K04562 flagellar biosynthesis protein FlhG Tax=GWF2_RBX1_38_17_curated
cobyrinic acid ac-diamide synthase
GWF2_RBX1_38_17_gwf2_scaffold_173_10
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

14187..17003
DNA (2817bp) protein (939aa)
Hypothetical conserved protein id=1750259 bin=GWE2_RBX1_39_32 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
peptidase M1 membrane alanine aminopeptidase Tax=GWF2_RBX1_38_17_curated
peptidase M1 membrane alanine aminopeptidase
GWF2_RBX1_38_17_gwf2_scaffold_173_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(17121..17501)
DNA (381bp) protein (127aa)
methionine-R-sulfoxide reductase (EC:1.8.4.12); K07305 peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] Tax=GWF2_RBX1_38_17_curated
methionine-R-sulfoxide reductase (EC:1.8.4.12)
Peptide methionine sulfoxide reductase MsrB id=1808692 bin=GWD2_RBX1-related_39_127 species=Methanohalobium evestigatum genus=Methanohalobium taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWF2_RBX1_38_17_gwf2_scaffold_173_12
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(17608..17787)
DNA (180bp) protein (60aa)
Putative uncharacterized protein id=1750256 bin=GWE2_RBX1_39_32 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Putative uncharacterized protein Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_173_13
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(17878..18504)
DNA (627bp) protein (209aa)
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; K01625 2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.16] id=24608776 bin=RAAC11 species=Nitrospina sp. AB-629-B18 genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=RAAC11 organism_group=Unknown_CP
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; K01625 2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.16] Tax=GWF2_RBX1
2-dehydro-3-deoxyphosphogluconate aldolase
GWF2_RBX1_38_17_gwf2_scaffold_173_14
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(18510..19460)
DNA (951bp) protein (317aa)
isopropylmalate/homocitrate/citramalate synthase; K01666 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] Tax=GWF2_RBX1_38_17_curated
Putative uncharacterized protein id=1808686 bin=GWD2_RBX1-related_39_127 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
isopropylmalate/homocitrate/citramalate synthase
GWF2_RBX1_38_17_gwf2_scaffold_173_15
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(19562..20410)
DNA (849bp) protein (283aa)
pantoate--beta-alanine ligase (EC:6.3.2.1); K01918 pantoate--beta-alanine ligase [EC:6.3.2.1] Tax=GWF2_RBX1_38_17_curated
pantoate--beta-alanine ligase (EC:6.3.2.1)
Pantothenate synthetase id=1750253 bin=GWE2_RBX1_39_32 species=Caldicellulosiruptor saccharolyticus genus=Caldicellulosiruptor taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWF2_RBX1_38_17_gwf2_scaffold_173_16
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(20432..20536)
DNA (105bp) protein (35aa)
id=24608779 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
id=24608779 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_173_17
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(20520..22610)
DNA (2091bp) protein (697aa)
TopA; topoisomerase IA; K03168 DNA topoisomerase I [EC:5.99.1.2] Tax=GWF2_RBX1_38_17_curated
DNA topoisomerase id=1750252 bin=GWE2_RBX1_39_32 species=Caldanaerobacter subterraneus genus=Caldanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
TopA; topoisomerase IA
GWF2_RBX1_38_17_gwf2_scaffold_173_18
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(22872..24668)
DNA (1797bp) protein (599aa)
DNA mismatch repair protein MutL id=3503703 bin=GWF2_OP9-related_38_17 species=Methanococcoides burtonii genus=Methanococcoides taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
DNA mismatch repair protein MutL; K03572 DNA mismatch repair protein MutL Tax=GWF2_RBX1_38_17_curated
DNA mismatch repair protein MutL
GWF2_RBX1_38_17_gwf2_scaffold_173_19
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(24739..25719)
DNA (981bp) protein (327aa)
Thiamine-phosphate synthase id=1750248 bin=GWE2_RBX1_39_32 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
thiE; thiamin biosynthetic bifunctional enzyme Tax=GWF2_RBX1_38_17_curated
thiE; thiamin biosynthetic bifunctional enzyme
GWF2_RBX1_38_17_gwf2_scaffold_173_20
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(25719..27356)
DNA (1638bp) protein (546aa)
CTP synthase (EC:6.3.4.2); K01937 CTP synthase [EC:6.3.4.2] Tax=GWF2_RBX1_38_17_curated
CTP synthase (EC:6.3.4.2)
CTP synthase id=1750245 bin=GWE2_RBX1_39_32 species=unknown genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWF2_RBX1_38_17_gwf2_scaffold_173_21
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(27380..28699)
DNA (1320bp) protein (440aa)
Putative uncharacterized protein id=1750243 bin=GWE2_RBX1_39_32 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWF2_RBX1_38_17_gwf2_scaffold_173_22
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(28859..29239)
DNA (381bp) protein (127aa)
dgkA; diacylglycerol kinase (EC:2.7.1.107); K00901 diacylglycerol kinase [EC:2.7.1.107] Tax=GWF2_RBX1_38_17_curated
Diacylglycerol kinase id=1750241 bin=GWE2_RBX1_39_32 species=Bacillus cereus genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
diacylglycerol kinase DgkA
GWF2_RBX1_38_17_gwf2_scaffold_173_23
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(29232..29705)
DNA (474bp) protein (158aa)
Probable rRNA maturation factor id=1808670 bin=GWD2_RBX1-related_39_127 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
hypothetical protein; K07042 probable rRNA maturation factor Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWF2_RBX1_38_17_gwf2_scaffold_173_24
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(29715..31853)
DNA (2139bp) protein (713aa)
7TM receptor with intracellular metal dependent phosphohydrolase; K07037 Tax=GWF2_RBX1_38_17_curated
7TM receptor with intracellular metal dependent phosphohydrolase id=1750237 bin=GWE2_RBX1_39_32 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
7TM receptor with intracellular metal dependent phosphohydrolase
GWF2_RBX1_38_17_gwf2_scaffold_173_25
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(31935..33185)
DNA (1251bp) protein (417aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; K00790 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] Tax=GWF2_RBX1_38_17_curated
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase id=1750235 bin=GWE2_RBX1_39_32 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWF2_RBX1_38_17_gwf2_scaffold_173_26
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(33190..34233)
DNA (1044bp) protein (348aa)
glycosyl transferase family protein; K13685 UDP-N-acetylglucosamine:undecaprenyl-P N-acetylglucosaminyl 1-P transferase [EC:2.7.8.-] Tax=GWF2_RBX1_38_17_curated
tagO; UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase TagO (EC:2.7.8.33)
Glycosyl transferase, family 4, conserved region-containing protein id=1750233 bin=GWE2_RBX1_39_32 species=unknown genus=Thermoanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Displaying items 1-30 of 123 in total

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