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GWF2_RBX1_38_17_gwf2_scaffold_644

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Displaying items 1-30 of 53 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF2_RBX1_38_17_gwf2_scaffold_644_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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392..1345
DNA (954bp) protein (318aa)
ABC transporter related protein id=1922823 bin=GWE2_RBX1_39_32 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
ABC transporter; K09687 antibiotic transport system ATP-binding protein Tax=GWF2_RBX1_38_17_curated
ABC transporter ATPase
GWF2_RBX1_38_17_gwf2_scaffold_644_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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1342..2058
DNA (717bp) protein (239aa)
Predicted ABC transporter, permease protein id=1922825 bin=GWE2_RBX1_39_32 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
ABC transporter permease Tax=GWF2_RBX1_38_17_curated
ABC transporter permease
GWF2_RBX1_38_17_gwf2_scaffold_644_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

2049..3614
DNA (1566bp) protein (522aa)
ABC-type uncharacterized transport system involved in gliding motility auxiliary component-like protein id=1922828 bin=GWE2_RBX1_39_32 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
ABC transporter Tax=GWF2_RBX1_38_17_curated
ABC transporter
GWF2_RBX1_38_17_gwf2_scaffold_644_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

3749..4657
DNA (909bp) protein (303aa)
id=1922830 bin=GWE2_RBX1_39_32 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1922830 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_644_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

4904..5095
DNA (192bp) protein (64aa)
id=1922831 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1922831 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_644_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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5224..6333
DNA (1110bp) protein (370aa)
DegV family protein id=1922832 bin=GWE2_RBX1_39_32 species=Bacillus selenitireducens genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
DegV family protein Tax=GWF2_RBX1_38_17_curated
DegV family protein
GWF2_RBX1_38_17_gwf2_scaffold_644_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

6633..7163
DNA (531bp) protein (177aa)
Putative uncharacterized protein id=1922834 bin=GWE2_RBX1_39_32 species=Clostridium carboxidivorans genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein; K07040 uncharacterized protein Tax=GWF2_RBX1_38_17_curated
protein of unknown function DUF177
GWF2_RBX1_38_17_gwf2_scaffold_644_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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7363..8346
DNA (984bp) protein (328aa)
fatty acid/phospholipid synthesis protein PlsX; K03621 glycerol-3-phosphate acyltransferase PlsX [EC:2.3.1.15] Tax=GWF2_RBX1_38_17_curated
Phosphate acyltransferase id=4397703 bin=GWF2_OP9-related_38_17 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
fatty acid/phospholipid synthesis protein PlsX
GWF2_RBX1_38_17_gwf2_scaffold_644_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

8366..9367
DNA (1002bp) protein (334aa)
3-oxoacyl-(acyl-carrier-protein) synthase III (EC:2.3.1.41); K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] Tax=GWF2_RBX1_38_17_curated
3-oxoacyl-[acyl-carrier-protein] synthase 3 id=1922838 bin=GWE2_RBX1_39_32 species=Mitsuokella multacida genus=Mitsuokella taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
3-oxoacyl-ACP synthase
GWF2_RBX1_38_17_gwf2_scaffold_644_10
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

9471..10631
DNA (1161bp) protein (387aa)
acyl-CoA dehydrogenase, short-chain specific (EC:1.3.99.2) Tax=GWF2_RBX1_38_17_curated
Acyl-CoA dehydrogenase, short-chain specific id=1922839 bin=GWE2_RBX1_39_32 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
acyl-CoA dehydrogenase, short-chain specific
GWF2_RBX1_38_17_gwf2_scaffold_644_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

10696..11481
DNA (786bp) protein (262aa)
Electron transfer flavoprotein alpha/beta-subunit id=1922840 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
electron transfer flavoprotein, beta subunit Tax=GWF2_RBX1_38_17_curated
electron transfer flavoprotein, beta subunit
GWF2_RBX1_38_17_gwf2_scaffold_644_12
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

11493..12665
DNA (1173bp) protein (391aa)
electron transfer flavoprotein subunit alpha/beta; K03522 electron transfer flavoprotein alpha subunit id=24610585 bin=RAAC11 species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=RAAC11 organism_group=Unknown_CP
electron transfer flavoprotein subunit alpha/beta; K03522 electron transfer flavoprotein alpha subunit Tax=GWF2_RBX1_38_17_curated
electron transfer flavoprotein subunit alpha/beta
GWF2_RBX1_38_17_gwf2_scaffold_644_13
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

12667..13515
DNA (849bp) protein (283aa)
malonyl CoA-acyl carrier protein transacylase; K00645 [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] Tax=GWF2_RBX1_38_17_curated
malonyl CoA-acyl carrier protein transacylase id=1922842 bin=GWE2_RBX1_39_32 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
malonyl CoA-acyl carrier protein transacylase
GWF2_RBX1_38_17_gwf2_scaffold_644_14
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

13512..14252
DNA (741bp) protein (247aa)
fabG; 3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100); K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=GWF2_RBX1_38_17_curated
3-oxoacyl-(Acyl-carrier-protein) reductase id=1922843 bin=GWE2_RBX1_39_32 species=unknown genus=Listeria taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
fabG; 3-oxoacyl-ACP reductase
GWF2_RBX1_38_17_gwf2_scaffold_644_15
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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14297..14536
DNA (240bp) protein (80aa)
Acyl carrier protein id=1922844 bin=GWE2_RBX1_39_32 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
acyl carrier protein; K02078 acyl carrier protein Tax=GWF2_RBX1_38_17_curated
acyl carrier protein
GWF2_RBX1_38_17_gwf2_scaffold_644_16
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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14616..15566
DNA (951bp) protein (317aa)
2-nitropropane dioxygenase NPD id=1831169 bin=GWD2_RBX1-related_39_127 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
2-nitropropane dioxygenase Tax=GWF2_RBX1_38_17_curated
2-nitropropane dioxygenase
GWF2_RBX1_38_17_gwf2_scaffold_644_17
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

15582..16820
DNA (1239bp) protein (413aa)
3-oxoacyl-(acyl-carrier-protein) synthase 2; K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] Tax=GWF2_RBX1_38_17_curated
3-oxoacyl-[acyl-carrier-protein] synthase 2 id=1922846 bin=GWE2_RBX1_39_32 species=unknown genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
3-oxoacyl-(acyl-carrier-protein) synthase 2
GWF2_RBX1_38_17_gwf2_scaffold_644_18
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

16820..17446
DNA (627bp) protein (209aa)
RNase HII; K03470 ribonuclease HII [EC:3.1.26.4] Tax=GWF2_RBX1_38_17_curated
rnhB; Ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII id=1831165 bin=GWD2_RBX1-related_39_127 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWF2_RBX1_38_17_gwf2_scaffold_644_19
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

17457..17801
DNA (345bp) protein (115aa)
UPF0102 protein NAL212_2320 id=1922848 bin=GWE2_RBX1_39_32 species=Nitrosomonas sp. AL212 genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein; K07460 putative endonuclease Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWF2_RBX1_38_17_gwf2_scaffold_644_20
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(17820..20222)
DNA (2403bp) protein (801aa)
Peptidase S8 and S53 subtilisin kexin sedolisin id=1831161 bin=GWD2_RBX1-related_39_127 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
peptidase S8 and S53 subtilisin kexin sedolisin Tax=GWF2_RBX1_38_17_curated
peptidase S8 and S53 subtilisin kexin sedolisin
GWF2_RBX1_38_17_gwf2_scaffold_644_21
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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20376..21296
DNA (921bp) protein (307aa)
L-lactate dehydrogenase; K00016 L-lactate dehydrogenase [EC:1.1.1.27] Tax=GWF2_RBX1_38_17_curated
L-lactate dehydrogenase id=1831159 bin=GWD2_RBX1-related_39_127 species=unknown genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
lactate dehydrogenase
GWF2_RBX1_38_17_gwf2_scaffold_644_22
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(21286..26142)
DNA (4857bp) protein (1619aa)
id=1922890 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1922890 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_644_23
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(26424..27599)
DNA (1176bp) protein (392aa)
putative oxygen-independent coproporphyrinogen III oxidase (EC:1.3.99.22); K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22] id=24610596 bin=RAAC11 species=Clostridium botulinum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
putative oxygen-independent coproporphyrinogen III oxidase (EC:1.3.99.22); K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22] Tax=GWF2_RBX1_38_17_curated
coproporphyrinogen III oxidase (EC:1.3.99.22)
GWF2_RBX1_38_17_gwf2_scaffold_644_24
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(27602..29407)
DNA (1806bp) protein (602aa)
Elongation factor 4 id=1922893 bin=GWE2_RBX1_39_32 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GTP-binding protein LepA; K03596 GTP-binding protein LepA Tax=GWF2_RBX1_38_17_curated
GTP-binding protein LepA
GWF2_RBX1_38_17_gwf2_scaffold_644_25
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(29489..29863)
DNA (375bp) protein (125aa)
Chemotaxis protein cheY id=1831111 bin=GWD2_RBX1-related_39_127 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
chemotaxis protein Y, response regulator CheY Tax=GWF2_RBX1_38_17_curated
chemotaxis protein Y, response regulator CheY
GWF2_RBX1_38_17_gwf2_scaffold_644_26
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(29891..30265)
DNA (375bp) protein (125aa)
Putative chemotaxis response regulator receiver (CheY-like) id=4397721 bin=GWF2_OP9-related_38_17 species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
putative chemotaxis response regulator receiver (CheY-like); K03413 two-component system, chemotaxis family, response regulator CheY Tax=GWF2_RBX1_38_17_curated
chemotaxis protein CheY
GWF2_RBX1_38_17_gwf2_scaffold_644_27
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(30258..30737)
DNA (480bp) protein (160aa)
Hypothetical cytosolic protein id=1922903 bin=GWE2_RBX1_39_32 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
cytoplasmic protein Tax=GWF2_RBX1_38_17_curated
cytoplasmic protein
GWF2_RBX1_38_17_gwf2_scaffold_644_28
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(30903..31946)
DNA (1044bp) protein (348aa)
response regulator receiver modulated chemotaxis protein CheB (EC:3.1.1.61); K03412 two-component system, chemotaxis family, response regulator CheB [EC:3.1.1.61] Tax=GWF2_RBX1_38_17_curated
response regulator receiver modulated chemotaxis protein CheB (EC:3.1.1.61)
Chemotaxis response regulator protein-glutamate methylesterase id=1922906 bin=GWE2_RBX1_39_32 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWF2_RBX1_38_17_gwf2_scaffold_644_29
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(32032..32883)
DNA (852bp) protein (284aa)
Putative signal transduction protein id=1922909 bin=GWE2_RBX1_39_32 species=Desulfovibrio fructosivorans genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWF2_RBX1_38_17_gwf2_scaffold_644_30
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(32880..33359)
DNA (480bp) protein (160aa)
CheD, stimulates methylation of MCP protein; K03411 chemotaxis protein CheD [EC:3.5.1.44] Tax=GWF2_RBX1_38_17_curated
Probable chemoreceptor glutamine deamidase CheD id=1922912 bin=GWE2_RBX1_39_32 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
CheD, stimulates methylation of MCP protein
Displaying items 1-30 of 53 in total

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